# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm03493.fasta.nr -Q bm03493.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm03493, 457 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6812102 sequences Expectation_n fit: rho(ln(x))= 4.9829+/-0.000183; mu= 11.7637+/- 0.010 mean_var=68.5611+/-13.302, 0's: 48 Z-trim: 133 B-trim: 0 in 0/66 Lambda= 0.154894 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|2494891|sp|Q16576.1|RBBP7_HUMAN Histone-binding ( 425) 2930 663.8 2e-188 gi|2494892|sp|Q60973|RBBP7_MOUSE Histone-binding p ( 425) 2925 662.7 4.4e-188 gi|74006529|ref|XP_857851.1| PREDICTED: similar to ( 425) 2924 662.4 5.1e-188 gi|74138714|dbj|BAE27173.1| unnamed protein produc ( 425) 2922 662.0 6.9e-188 gi|26347165|dbj|BAC37231.1| unnamed protein produc ( 425) 2921 661.8 8.1e-188 gi|88930445|sp|Q3SWX8.1|RBBP7_BOVIN Histone-bindin ( 425) 2918 661.1 1.3e-187 gi|158256566|dbj|BAF84256.1| unnamed protein produ ( 425) 2914 660.2 2.4e-187 gi|74006541|ref|XP_858100.1| PREDICTED: similar to ( 426) 2912 659.8 3.3e-187 gi|75070511|sp|Q5R654.1|RBBP7_PONAB Histone-bindin ( 426) 2905 658.2 9.7e-187 gi|57209889|emb|CAI41284.1| retinoblastoma binding ( 420) 2901 657.3 1.8e-186 gi|119619326|gb|EAW98920.1| retinoblastoma binding ( 469) 2899 656.9 2.6e-186 gi|109130029|ref|XP_001103461.1| PREDICTED: retino ( 469) 2899 656.9 2.6e-186 gi|57209888|emb|CAI41283.1| retinoblastoma binding ( 469) 2899 656.9 2.6e-186 gi|74006545|ref|XP_849201.1| PREDICTED: similar to ( 469) 2898 656.7 3.1e-186 gi|149744362|ref|XP_001490972.1| PREDICTED: simila ( 469) 2897 656.4 3.6e-186 gi|74006535|ref|XP_857969.1| PREDICTED: similar to ( 425) 2886 654.0 1.8e-185 gi|190016325|pdb|3CFS|B Chain B, Structural Basis ( 414) 2831 641.7 9e-182 gi|126336866|ref|XP_001364292.1| PREDICTED: simila ( 425) 2824 640.1 2.7e-181 gi|82242619|sp|Q8AVH1|RBBP7_XENLA Histone-binding ( 425) 2793 633.2 3.3e-179 gi|190016327|pdb|3CFV|B Chain B, Structural Basis ( 414) 2791 632.7 4.4e-179 gi|82237458|sp|Q6P315|RBBP7_XENTR Histone-binding ( 425) 2791 632.7 4.5e-179 gi|149638383|ref|XP_001515854.1| PREDICTED: simila ( 482) 2789 632.3 6.8e-179 gi|74006531|ref|XP_537971.2| PREDICTED: similar to ( 405) 2788 632.0 6.9e-179 gi|82247560|sp|Q9I8G9|RBBP7_CHICK Histone-binding ( 424) 2758 625.3 7.5e-177 gi|74189353|dbj|BAE22707.1| unnamed protein produc ( 391) 2702 612.8 4.1e-173 gi|74006537|ref|XP_858015.1| PREDICTED: similar to ( 391) 2701 612.6 4.8e-173 gi|159155844|gb|AAI54779.1| Retinoblastoma binding ( 426) 2655 602.3 6.4e-170 gi|62897117|dbj|BAD96499.1| retinoblastoma binding ( 424) 2652 601.7 1e-169 gi|82241288|sp|Q7ZTY4|RBBP7_BRARE Histone-binding ( 426) 2649 601.0 1.6e-169 gi|88930442|sp|Q3MHL3.3|RBBP4_BOVIN Histone-bindin ( 425) 2640 599.0 6.5e-169 gi|109102035|ref|XP_001090071.1| PREDICTED: retino ( 425) 2639 598.8 7.6e-169 gi|45709030|gb|AAH67546.1| Rbb4l protein [Danio re ( 448) 2636 598.1 1.3e-168 gi|90101524|sp|Q60972.4|RBBP4_MOUSE Histone-bindin ( 425) 2635 597.9 1.4e-168 gi|1016275|gb|AAC52275.1| retinoblastoma-binding p ( 461) 2635 597.9 1.5e-168 gi|88930444|sp|Q5RF92.3|RBBP4_PONAB Histone-bindin ( 425) 2634 597.6 1.6e-168 gi|82248867|sp|Q9W7I5|RBBP4_CHICK Histone-binding ( 425) 2630 596.7 3e-168 gi|149640423|ref|XP_001509028.1| PREDICTED: simila ( 425) 2629 596.5 3.6e-168 gi|114555385|ref|XP_513286.2| PREDICTED: retinobla ( 513) 2629 596.6 4.1e-168 gi|89268697|emb|CAJ82718.1| OTTXETP00000010326 [Xe ( 425) 2626 595.9 5.7e-168 gi|126331637|ref|XP_001363478.1| PREDICTED: simila ( 425) 2625 595.6 6.6e-168 gi|82236756|sp|Q6INH0|RBP4B_XENLA Histone-binding ( 425) 2624 595.4 7.7e-168 gi|82232091|sp|Q5M7K4|RBBP4_XENTR Histone-binding ( 425) 2618 594.1 2e-167 gi|50603606|gb|AAH77257.1| Rbbp4 protein [Xenopus ( 425) 2612 592.7 5e-167 gi|156553332|ref|XP_001602921.1| PREDICTED: simila ( 431) 2606 591.4 1.3e-166 gi|66534191|ref|XP_624580.1| PREDICTED: similar to ( 427) 2605 591.2 1.5e-166 gi|108873970|gb|EAT38195.1| retinoblastoma-binding ( 429) 2602 590.5 2.3e-166 gi|39645450|gb|AAH63984.1| Retinoblastoma binding ( 424) 2600 590.0 3.2e-166 gi|194207743|ref|XP_001916855.1| PREDICTED: simila ( 430) 2598 589.6 4.4e-166 gi|82228155|sp|O93377|RBP4A_XENLA Histone-binding ( 425) 2595 588.9 6.9e-166 gi|37595362|gb|AAQ94567.1| retinoblastoma binding ( 424) 2594 588.7 8e-166 >>gi|2494891|sp|Q16576.1|RBBP7_HUMAN Histone-binding pro (425 aa) initn: 2930 init1: 2930 opt: 2930 Z-score: 3538.0 bits: 663.8 E(): 2e-188 Smith-Waterman score: 2930; 100.000% identity (100.000% similar) in 425 aa overlap (33-457:1-425) 10 20 30 40 50 60 bm0349 WERQERQRSGCSWLTRGVRGGGEGRTTRRKMASKEMFEDTVEERVINEEYKIWKKNTPFL :::::::::::::::::::::::::::::: gi|249 MASKEMFEDTVEERVINEEYKIWKKNTPFL 10 20 30 70 80 90 100 110 120 bm0349 YDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 YDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDA 40 50 60 70 80 90 130 140 150 160 170 180 bm0349 QFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 QFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLV 100 110 120 130 140 150 190 200 210 220 230 240 bm0349 FDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 FDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGP 160 170 180 190 200 210 250 260 270 280 290 300 bm0349 KEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 KEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDA 220 230 240 250 260 270 310 320 330 340 350 360 bm0349 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 280 290 300 310 320 330 370 380 390 400 410 420 bm0349 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 340 350 360 370 380 390 430 440 450 bm0349 SVSEDNIMQIWQMAENIYNDEESDVTTSELEGQGS ::::::::::::::::::::::::::::::::::: gi|249 SVSEDNIMQIWQMAENIYNDEESDVTTSELEGQGS 400 410 420 >>gi|2494892|sp|Q60973|RBBP7_MOUSE Histone-binding prote (425 aa) initn: 2925 init1: 2925 opt: 2925 Z-score: 3531.9 bits: 662.7 E(): 4.4e-188 Smith-Waterman score: 2925; 99.765% identity (100.000% similar) in 425 aa overlap (33-457:1-425) 10 20 30 40 50 60 bm0349 WERQERQRSGCSWLTRGVRGGGEGRTTRRKMASKEMFEDTVEERVINEEYKIWKKNTPFL :::::::::::::::::::::::::::::: gi|249 MASKEMFEDTVEERVINEEYKIWKKNTPFL 10 20 30 70 80 90 100 110 120 bm0349 YDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 YDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDA 40 50 60 70 80 90 130 140 150 160 170 180 bm0349 QFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 QFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLV 100 110 120 130 140 150 190 200 210 220 230 240 bm0349 FDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 FDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGP 160 170 180 190 200 210 250 260 270 280 290 300 bm0349 KEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 KEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDA 220 230 240 250 260 270 310 320 330 340 350 360 bm0349 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 280 290 300 310 320 330 370 380 390 400 410 420 bm0349 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 340 350 360 370 380 390 430 440 450 bm0349 SVSEDNIMQIWQMAENIYNDEESDVTTSELEGQGS ::::::::::::::::::::::::::.:::::::: gi|249 SVSEDNIMQIWQMAENIYNDEESDVTASELEGQGS 400 410 420 >>gi|74006529|ref|XP_857851.1| PREDICTED: similar to ret (425 aa) initn: 2924 init1: 2924 opt: 2924 Z-score: 3530.7 bits: 662.4 E(): 5.1e-188 Smith-Waterman score: 2924; 99.765% identity (100.000% similar) in 425 aa overlap (33-457:1-425) 10 20 30 40 50 60 bm0349 WERQERQRSGCSWLTRGVRGGGEGRTTRRKMASKEMFEDTVEERVINEEYKIWKKNTPFL :::::::::::::::::::::::::::::: gi|740 MASKEMFEDTVEERVINEEYKIWKKNTPFL 10 20 30 70 80 90 100 110 120 bm0349 YDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 YDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDA 40 50 60 70 80 90 130 140 150 160 170 180 bm0349 QFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLV :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 QFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLV 100 110 120 130 140 150 190 200 210 220 230 240 bm0349 FDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 FDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGP 160 170 180 190 200 210 250 260 270 280 290 300 bm0349 KEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 KEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDA 220 230 240 250 260 270 310 320 330 340 350 360 bm0349 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 280 290 300 310 320 330 370 380 390 400 410 420 bm0349 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 340 350 360 370 380 390 430 440 450 bm0349 SVSEDNIMQIWQMAENIYNDEESDVTTSELEGQGS ::::::::::::::::::::::::::::::::::: gi|740 SVSEDNIMQIWQMAENIYNDEESDVTTSELEGQGS 400 410 420 >>gi|74138714|dbj|BAE27173.1| unnamed protein product [M (425 aa) initn: 2922 init1: 2922 opt: 2922 Z-score: 3528.3 bits: 662.0 E(): 6.9e-188 Smith-Waterman score: 2922; 99.529% identity (100.000% similar) in 425 aa overlap (33-457:1-425) 10 20 30 40 50 60 bm0349 WERQERQRSGCSWLTRGVRGGGEGRTTRRKMASKEMFEDTVEERVINEEYKIWKKNTPFL :::::::::::::::::::::::::::::: gi|741 MASKEMFEDTVEERVINEEYKIWKKNTPFL 10 20 30 70 80 90 100 110 120 bm0349 YDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 YDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDA 40 50 60 70 80 90 130 140 150 160 170 180 bm0349 QFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 QFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLV 100 110 120 130 140 150 190 200 210 220 230 240 bm0349 FDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 FDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGP 160 170 180 190 200 210 250 260 270 280 290 300 bm0349 KEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDA :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|741 KEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDSRSNTTSKPSHLVDA 220 230 240 250 260 270 310 320 330 340 350 360 bm0349 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 280 290 300 310 320 330 370 380 390 400 410 420 bm0349 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 340 350 360 370 380 390 430 440 450 bm0349 SVSEDNIMQIWQMAENIYNDEESDVTTSELEGQGS ::::::::::::::::::::::::::.:::::::: gi|741 SVSEDNIMQIWQMAENIYNDEESDVTASELEGQGS 400 410 420 >>gi|26347165|dbj|BAC37231.1| unnamed protein product [M (425 aa) initn: 2921 init1: 2921 opt: 2921 Z-score: 3527.1 bits: 661.8 E(): 8.1e-188 Smith-Waterman score: 2921; 99.529% identity (100.000% similar) in 425 aa overlap (33-457:1-425) 10 20 30 40 50 60 bm0349 WERQERQRSGCSWLTRGVRGGGEGRTTRRKMASKEMFEDTVEERVINEEYKIWKKNTPFL :::::::::::::::::::::::::::::: gi|263 MASKEMFEDTVEERVINEEYKIWKKNTPFL 10 20 30 70 80 90 100 110 120 bm0349 YDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 YDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDA 40 50 60 70 80 90 130 140 150 160 170 180 bm0349 QFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 QFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLV 100 110 120 130 140 150 190 200 210 220 230 240 bm0349 FDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGP ::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|263 FDYTKHPAKPDPNGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGP 160 170 180 190 200 210 250 260 270 280 290 300 bm0349 KEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 KEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDA 220 230 240 250 260 270 310 320 330 340 350 360 bm0349 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 280 290 300 310 320 330 370 380 390 400 410 420 bm0349 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 340 350 360 370 380 390 430 440 450 bm0349 SVSEDNIMQIWQMAENIYNDEESDVTTSELEGQGS ::::::::::::::::::::::::::.:::::::: gi|263 SVSEDNIMQIWQMAENIYNDEESDVTASELEGQGS 400 410 420 >>gi|88930445|sp|Q3SWX8.1|RBBP7_BOVIN Histone-binding pr (425 aa) initn: 2918 init1: 2918 opt: 2918 Z-score: 3523.5 bits: 661.1 E(): 1.3e-187 Smith-Waterman score: 2918; 99.529% identity (99.765% similar) in 425 aa overlap (33-457:1-425) 10 20 30 40 50 60 bm0349 WERQERQRSGCSWLTRGVRGGGEGRTTRRKMASKEMFEDTVEERVINEEYKIWKKNTPFL :::::::::::::::::::::::::::::: gi|889 MASKEMFEDTVEERVINEEYKIWKKNTPFL 10 20 30 70 80 90 100 110 120 bm0349 YDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|889 YDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDA 40 50 60 70 80 90 130 140 150 160 170 180 bm0349 QFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLV :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|889 QFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLV 100 110 120 130 140 150 190 200 210 220 230 240 bm0349 FDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|889 FDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGP 160 170 180 190 200 210 250 260 270 280 290 300 bm0349 KEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|889 KEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDA 220 230 240 250 260 270 310 320 330 340 350 360 bm0349 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|889 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 280 290 300 310 320 330 370 380 390 400 410 420 bm0349 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|889 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 340 350 360 370 380 390 430 440 450 bm0349 SVSEDNIMQIWQMAENIYNDEESDVTTSELEGQGS ::::::::::::::::::::::::::: ::::::: gi|889 SVSEDNIMQIWQMAENIYNDEESDVTTPELEGQGS 400 410 420 >>gi|158256566|dbj|BAF84256.1| unnamed protein product [ (425 aa) initn: 2914 init1: 2914 opt: 2914 Z-score: 3518.6 bits: 660.2 E(): 2.4e-187 Smith-Waterman score: 2914; 99.529% identity (100.000% similar) in 425 aa overlap (33-457:1-425) 10 20 30 40 50 60 bm0349 WERQERQRSGCSWLTRGVRGGGEGRTTRRKMASKEMFEDTVEERVINEEYKIWKKNTPFL :::::::::::::::::::::::::::::: gi|158 MASKEMFEDTVEERVINEEYKIWKKNTPFL 10 20 30 70 80 90 100 110 120 bm0349 YDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 YDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDA 40 50 60 70 80 90 130 140 150 160 170 180 bm0349 QFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 QFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLV 100 110 120 130 140 150 190 200 210 220 230 240 bm0349 FDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGP :.:::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 FNYTKRPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGP 160 170 180 190 200 210 250 260 270 280 290 300 bm0349 KEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 KEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDA 220 230 240 250 260 270 310 320 330 340 350 360 bm0349 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNET 280 290 300 310 320 330 370 380 390 400 410 420 bm0349 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 ILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVIC 340 350 360 370 380 390 430 440 450 bm0349 SVSEDNIMQIWQMAENIYNDEESDVTTSELEGQGS ::::::::::::::::::::::::::::::::::: gi|158 SVSEDNIMQIWQMAENIYNDEESDVTTSELEGQGS 400 410 420 >>gi|74006541|ref|XP_858100.1| PREDICTED: similar to ret (426 aa) initn: 2910 init1: 2221 opt: 2912 Z-score: 3516.2 bits: 659.8 E(): 3.3e-187 Smith-Waterman score: 2912; 99.531% identity (99.765% similar) in 426 aa overlap (33-457:1-426) 10 20 30 40 50 60 bm0349 WERQERQRSGCSWLTRGVRGGGEGRTTRRKMASKEMFEDTVEERVINEEYKIWKKNTPFL :::::::::::::::::::::::::::::: gi|740 MASKEMFEDTVEERVINEEYKIWKKNTPFL 10 20 30 70 80 90 100 110 120 bm0349 YDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 YDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDA 40 50 60 70 80 90 130 140 150 160 170 180 bm0349 QFDASHCDSDKG-EFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVL :::::::::.:: ::::::::::::::::::::::::::::::::::::::::::::::: gi|740 QFDASHCDSEKGAEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVL 100 110 120 130 140 150 190 200 210 220 230 240 bm0349 VFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 VFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAG 160 170 180 190 200 210 250 260 270 280 290 300 bm0349 PKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 PKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVD 220 230 240 250 260 270 310 320 330 340 350 360 bm0349 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNE 280 290 300 310 320 330 370 380 390 400 410 420 bm0349 TILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 TILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVI 340 350 360 370 380 390 430 440 450 bm0349 CSVSEDNIMQIWQMAENIYNDEESDVTTSELEGQGS :::::::::::::::::::::::::::::::::::: gi|740 CSVSEDNIMQIWQMAENIYNDEESDVTTSELEGQGS 400 410 420 >>gi|75070511|sp|Q5R654.1|RBBP7_PONAB Histone-binding pr (426 aa) initn: 2200 init1: 2200 opt: 2905 Z-score: 3507.7 bits: 658.2 E(): 9.7e-187 Smith-Waterman score: 2905; 99.061% identity (99.531% similar) in 426 aa overlap (33-457:1-426) 10 20 30 40 50 60 bm0349 WERQERQRSGCSWLTRGVRGGGEGRTTRRKMASKEMFEDTVEERVINEEYKIWKKNTPFL :::::::::::::::::::::::::::::: gi|750 MASKEMFEDTVEERVINEEYKIWKKNTPFL 10 20 30 70 80 90 100 110 120 bm0349 YDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 YDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDA 40 50 60 70 80 90 130 140 150 160 170 180 bm0349 QFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|750 QFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSGVLV 100 110 120 130 140 150 190 200 210 220 230 240 bm0349 FDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 FDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGP 160 170 180 190 200 210 250 260 270 280 290 300 bm0349 KEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDA ::::::::::.:::::::::::::::::::::::::::::::.::::::::::::::::: gi|750 KEGKIVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDA 220 230 240 250 260 270 310 320 330 340 350 360 bm0349 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQV-HWSPHNE :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: gi|750 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVVHWSPHNE 280 290 300 310 320 330 370 380 390 400 410 420 bm0349 TILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 TILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVI 340 350 360 370 380 390 430 440 450 bm0349 CSVSEDNIMQIWQMAENIYNDEESDVTTSELEGQGS :::::::::::::::::::::::::::::::::::: gi|750 CSVSEDNIMQIWQMAENIYNDEESDVTTSELEGQGS 400 410 420 >>gi|57209889|emb|CAI41284.1| retinoblastoma binding pro (420 aa) initn: 2901 init1: 2901 opt: 2901 Z-score: 3503.0 bits: 657.3 E(): 1.8e-186 Smith-Waterman score: 2901; 100.000% identity (100.000% similar) in 420 aa overlap (38-457:1-420) 10 20 30 40 50 60 bm0349 RQRSGCSWLTRGVRGGGEGRTTRRKMASKEMFEDTVEERVINEEYKIWKKNTPFLYDLVM :::::::::::::::::::::::::::::: gi|572 MFEDTVEERVINEEYKIWKKNTPFLYDLVM 10 20 30 70 80 90 100 110 120 bm0349 THALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 THALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDAS 40 50 60 70 80 90 130 140 150 160 170 180 bm0349 HCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 HCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTK 100 110 120 130 140 150 190 200 210 220 230 240 bm0349 HPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 HPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKI 160 170 180 190 200 210 250 260 270 280 290 300 bm0349 VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 VDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEV 220 230 240 250 260 270 310 320 330 340 350 360 bm0349 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASS 280 290 300 310 320 330 370 380 390 400 410 420 bm0349 GTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|572 GTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED 340 350 360 370 380 390 430 440 450 bm0349 NIMQIWQMAENIYNDEESDVTTSELEGQGS :::::::::::::::::::::::::::::: gi|572 NIMQIWQMAENIYNDEESDVTTSELEGQGS 400 410 420 457 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Thu Aug 7 16:25:52 2008 done: Thu Aug 7 16:28:16 2008 Total Scan time: 850.250 Total Display time: 0.120 Function used was FASTA [version 34.26.5 April 26, 2007]