hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-16341566/chunk_1/iprscan-20080807-16341566.nocrc
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Query sequence: bm03494
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00524                                                 372.9     2e-107   1
SM00523                                                 242.0    5.1e-68   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00523     1/1      52   161 ..     1   124 []   242.0  5.1e-68
SM00524     1/1     257   429 ..     1   212 []   372.9   2e-107

Alignments of top-scoring domains:
SM00523: domain 1 of 1, from 52 to 161: score 242.0, E = 5.1e-68
                   *->eeekwakkavesLvKkLKkkNkqqLeeLlqAVeSkgkpptrCvtipr
                      eeekwa+kav++LvKkLKkk k++ eeL++A++++g+p+  Cvtip 
     bm03494    52    EEEKWAEKAVDALVKKLKKK-KGAMEELEKALSCPGQPS-NCVTIP- 95   

                   eRslDgRlqvsdplQadrkglPhVlycRLfRWPDLqsddkhELKalptCq
                    RslDgRlqvs     +rkglPhV+ycR++RWPDLqs  +hELK+l++C+
     bm03494    96 -RSLDGRLQVS-----HRKGLPHVIYCRVWRWPDLQS--HHELKPLECCE 137  

                   yafesksnpegevCcNPYHYsrverpe<-*
                   ++f sk++   evC+NPYHY+rve+p+   
     bm03494   138 FPFGSKQK---EVCINPYHYKRVESPV    161  

SM00524: domain 1 of 1, from 257 to 429: score 372.9, E = 2e-107
                   *->esWcsIaYyElntRVGetfkvsspdphtvtVDGftdpssdgsrfcLG
                      ++WcsI+YyEln RVGe+f++ss+   +v VDGftdps++ +rfcLG
     bm03494   257    KHWCSIVYYELNNRVGEAFHASST---SVLVDGFTDPSNNKNRFCLG 300  

                   qlsNvnRneaiekiRkhIGkGvqLsyendqGdVwiynrsdspIFVqSptl
                   +lsNvnRn++ie++R+hIGkGv+L+y++  G+V+++++sds+IFVqS ++
     bm03494   301 LLSNVNRNSTIENTRRHIGKGVHLYYVG--GEVYAECLSDSSIFVQSRNC 348  

                   depsgrplsdtVhKlpPgysqKalKvFDmrkfaqqmrdaalsaqaAaaaq
                   ++++g+++ +tV+K+p g+s   lK+F++++faq                
     bm03494   349 NYHHGFHP-TTVCKIPSGCS---LKIFNNQEFAQ---------------- 378  

                   aAavaGmapyigekllerelakgaegvydlrrmCtiRiSFVKGWGedYsR
                                 ll++++++g+e vy+l++mCtiR+SFVKGWG++Y+R
     bm03494   379 --------------LLAQSVNHGFETVYELTKMCTIRMSFVKGWGAEYHR 414  

                   qditstPCWiEvhLn<-*
                   qd+tstPCWiE+hL+   
     bm03494   415 QDVTSTPCWIEIHLH    429  

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