# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm03544.fasta.nr -Q bm03544.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm03544, 188 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6823654 sequences Expectation_n fit: rho(ln(x))= 4.8752+/-0.000182; mu= 8.9677+/- 0.010 mean_var=60.4032+/-11.988, 0's: 35 Z-trim: 44 B-trim: 1991 in 1/64 Lambda= 0.165023 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62089188|dbj|BAD93038.1| glyoxalase I variant [ ( 188) 1297 316.5 1.3e-84 gi|134039205|sp|Q04760|LGUL_HUMAN Lactoylglutathio ( 184) 1269 309.8 1.3e-82 gi|54696834|gb|AAV38789.1| glyoxalase I [synthetic ( 185) 1269 309.8 1.3e-82 gi|114607262|ref|XP_001173775.1| PREDICTED: glyoxa ( 184) 1263 308.4 3.4e-82 gi|2392338|pdb|1FRO|A Chain A, Human Glyoxalase I ( 183) 1262 308.2 4e-82 gi|5020074|gb|AAD38008.1|AF146651_1 glyoxalase-I [ ( 184) 1262 308.2 4e-82 gi|3891517|pdb|1BH5|A Chain A, Human Glyoxalase I ( 183) 1253 306.0 1.8e-81 gi|15030212|gb|AAH11365.1| Glyoxalase I [Homo sapi ( 184) 1253 306.0 1.8e-81 gi|75076014|sp|Q4R5F2|LGUL_MACFA Lactoylglutathion ( 184) 1247 304.6 4.8e-81 gi|133777508|gb|AAI23483.1| GLO1 protein [Bos taur ( 184) 1173 287.0 9.6e-76 gi|81885359|sp|Q6P7Q4|LGUL_RAT Lactoylglutathione ( 184) 1172 286.8 1.1e-75 gi|73972779|ref|XP_532129.2| PREDICTED: similar to ( 300) 1169 286.2 2.7e-75 gi|21362640|sp|Q9CPU0|LGUL_MOUSE Lactoylglutathion ( 184) 1166 285.3 3e-75 gi|19354350|gb|AAH24663.1| Glyoxalase 1 [Mus muscu ( 184) 1165 285.1 3.6e-75 gi|149732489|ref|XP_001500538.1| PREDICTED: simila ( 184) 1156 282.9 1.6e-74 gi|119894426|ref|XP_001250503.1| PREDICTED: simila ( 184) 1151 281.8 3.6e-74 gi|114607264|ref|XP_001173739.1| PREDICTED: glyoxa ( 173) 1143 279.8 1.3e-73 gi|194040450|ref|XP_001927992.1| PREDICTED: simila ( 184) 1134 277.7 6e-73 gi|126309953|ref|XP_001379386.1| PREDICTED: hypoth ( 184) 1076 263.9 8.6e-69 gi|50740506|ref|XP_419481.1| PREDICTED: similar to ( 180) 1049 257.5 7.2e-67 gi|149635705|ref|XP_001507629.1| PREDICTED: hypoth ( 195) 1041 255.6 2.9e-66 gi|114607266|ref|XP_001173751.1| PREDICTED: simila ( 149) 1020 250.5 7.5e-65 gi|89272534|emb|CAJ83987.1| glyoxalase I [Xenopus ( 184) 1000 245.8 2.4e-63 gi|60649687|gb|AAH90582.1| Glo1 protein [Xenopus t ( 184) 995 244.6 5.5e-63 gi|50370174|gb|AAH76752.1| MGC82317 protein [Xenop ( 189) 973 239.4 2.1e-61 gi|51258529|gb|AAH80129.1| MGC84827 protein [Xenop ( 188) 963 237.0 1.1e-60 gi|58567409|gb|AAW78947.1| GekBS101P [Gekko japoni ( 149) 932 229.6 1.5e-58 gi|38382733|gb|AAH62383.1| Glyoxalase 1 [Danio rer ( 180) 921 227.0 1.1e-57 gi|47220881|emb|CAG03088.1| unnamed protein produc ( 240) 884 218.3 6.1e-55 gi|193911127|gb|EDW09994.1| GI20823 [Drosophila mo ( 178) 865 213.7 1.1e-53 gi|193902071|gb|EDW00938.1| GH20740 [Drosophila gr ( 178) 853 210.8 8e-53 gi|194159713|gb|EDW74614.1| GK22016 [Drosophila wi ( 180) 850 210.1 1.3e-52 gi|194175559|gb|EDW89170.1| GE24081 [Drosophila ya ( 176) 848 209.6 1.8e-52 gi|66504768|ref|XP_624304.1| PREDICTED: similar to ( 183) 848 209.6 1.9e-52 gi|194124702|gb|EDW46745.1| GM20801 [Drosophila se ( 176) 846 209.1 2.5e-52 gi|7304232|gb|AAF59267.1| CG1707-PA [Drosophila me ( 176) 846 209.1 2.5e-52 gi|190662507|gb|EDV59699.1| GG10756 [Drosophila er ( 176) 841 207.9 5.7e-52 gi|190620392|gb|EDV35916.1| GF12231 [Drosophila an ( 178) 841 207.9 5.8e-52 gi|194144582|gb|EDW60978.1| GJ20556 [Drosophila vi ( 178) 838 207.2 9.5e-52 gi|158273547|gb|EDO99335.1| predicted protein [Chl ( 184) 831 205.6 3.1e-51 gi|194113605|gb|EDW35648.1| GL17374 [Drosophila pe ( 178) 828 204.8 5e-51 gi|156206988|gb|EDO29146.1| predicted protein [Nem ( 178) 801 198.4 4.3e-49 gi|72014470|ref|XP_782938.1| PREDICTED: hypothetic ( 243) 801 198.5 5.5e-49 gi|113578664|dbj|BAF17027.1| Os05g0295800 [Oryza s ( 189) 799 198.0 6.2e-49 gi|108869100|gb|EAT33325.1| lactoylglutathione lya ( 179) 791 196.0 2.2e-48 gi|190583611|gb|EDV23681.1| expressed hypothetical ( 175) 790 195.8 2.6e-48 gi|108881553|gb|EAT45778.1| lactoylglutathione lya ( 501) 791 196.3 5.1e-48 gi|91085321|ref|XP_969715.1| PREDICTED: similar to ( 183) 786 194.9 5.2e-48 gi|157346705|emb|CAO16774.1| unnamed protein produ ( 185) 781 193.7 1.2e-47 gi|167870597|gb|EDS33980.1| lactoylglutathione lya ( 211) 776 192.5 3e-47 >>gi|62089188|dbj|BAD93038.1| glyoxalase I variant [Homo (188 aa) initn: 1297 init1: 1297 opt: 1297 Z-score: 1674.4 bits: 316.5 E(): 1.3e-84 Smith-Waterman score: 1297; 100.000% identity (100.000% similar) in 188 aa overlap (1-188:1-188) 10 20 30 40 50 60 bm0354 CSAAMAEPQPPSGGLTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 CSAAMAEPQPPSGGLTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMT 10 20 30 40 50 60 70 80 90 100 110 120 bm0354 LIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYH 70 80 90 100 110 120 130 140 150 160 170 180 bm0354 NGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 NGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN 130 140 150 160 170 180 bm0354 PNKMATLM :::::::: gi|620 PNKMATLM >>gi|134039205|sp|Q04760|LGUL_HUMAN Lactoylglutathione l (184 aa) initn: 1269 init1: 1269 opt: 1269 Z-score: 1638.5 bits: 309.8 E(): 1.3e-82 Smith-Waterman score: 1269; 100.000% identity (100.000% similar) in 184 aa overlap (5-188:1-184) 10 20 30 40 50 60 bm0354 CSAAMAEPQPPSGGLTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 MAEPQPPSGGLTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMT 10 20 30 40 50 70 80 90 100 110 120 bm0354 LIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 LIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYH 60 70 80 90 100 110 130 140 150 160 170 180 bm0354 NGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 NGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN 120 130 140 150 160 170 bm0354 PNKMATLM :::::::: gi|134 PNKMATLM 180 >>gi|54696834|gb|AAV38789.1| glyoxalase I [synthetic con (185 aa) initn: 1269 init1: 1269 opt: 1269 Z-score: 1638.5 bits: 309.8 E(): 1.3e-82 Smith-Waterman score: 1269; 100.000% identity (100.000% similar) in 184 aa overlap (5-188:1-184) 10 20 30 40 50 60 bm0354 CSAAMAEPQPPSGGLTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 MAEPQPPSGGLTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMT 10 20 30 40 50 70 80 90 100 110 120 bm0354 LIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 LIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYH 60 70 80 90 100 110 130 140 150 160 170 180 bm0354 NGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 NGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN 120 130 140 150 160 170 bm0354 PNKMATLM :::::::: gi|546 PNKMATLML 180 >>gi|114607262|ref|XP_001173775.1| PREDICTED: glyoxalase (184 aa) initn: 1263 init1: 1263 opt: 1263 Z-score: 1630.8 bits: 308.4 E(): 3.4e-82 Smith-Waterman score: 1263; 99.457% identity (99.457% similar) in 184 aa overlap (5-188:1-184) 10 20 30 40 50 60 bm0354 CSAAMAEPQPPSGGLTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MAEPQPPSGGLTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMT 10 20 30 40 50 70 80 90 100 110 120 bm0354 LIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYH :::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LIQKCDFPTMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYH 60 70 80 90 100 110 130 140 150 160 170 180 bm0354 NGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 NGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN 120 130 140 150 160 170 bm0354 PNKMATLM :::::::: gi|114 PNKMATLM 180 >>gi|2392338|pdb|1FRO|A Chain A, Human Glyoxalase I With (183 aa) initn: 1262 init1: 1262 opt: 1262 Z-score: 1629.6 bits: 308.2 E(): 4e-82 Smith-Waterman score: 1262; 100.000% identity (100.000% similar) in 183 aa overlap (6-188:1-183) 10 20 30 40 50 60 bm0354 CSAAMAEPQPPSGGLTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMT ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|239 AEPQPPSGGLTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMT 10 20 30 40 50 70 80 90 100 110 120 bm0354 LIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|239 LIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYH 60 70 80 90 100 110 130 140 150 160 170 180 bm0354 NGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|239 NGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN 120 130 140 150 160 170 bm0354 PNKMATLM :::::::: gi|239 PNKMATLM 180 >>gi|5020074|gb|AAD38008.1|AF146651_1 glyoxalase-I [Homo (184 aa) initn: 1262 init1: 1262 opt: 1262 Z-score: 1629.5 bits: 308.2 E(): 4e-82 Smith-Waterman score: 1262; 99.457% identity (99.457% similar) in 184 aa overlap (5-188:1-184) 10 20 30 40 50 60 bm0354 CSAAMAEPQPPSGGLTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|502 MAEPQPPSGGLTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMT 10 20 30 40 50 70 80 90 100 110 120 bm0354 LIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYH :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|502 LIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDATQSYH 60 70 80 90 100 110 130 140 150 160 170 180 bm0354 NGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|502 NGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN 120 130 140 150 160 170 bm0354 PNKMATLM :::::::: gi|502 PNKMATLM 180 >>gi|3891517|pdb|1BH5|A Chain A, Human Glyoxalase I Q33e (183 aa) initn: 1253 init1: 1253 opt: 1253 Z-score: 1618.0 bits: 306.0 E(): 1.8e-81 Smith-Waterman score: 1253; 98.907% identity (100.000% similar) in 183 aa overlap (6-188:1-183) 10 20 30 40 50 60 bm0354 CSAAMAEPQPPSGGLTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMT ::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|389 AEPQPPSGGLTDEAALSCCSDADPSTKDFLLQETMLRVKDPKKSLDFYTRVLGMT 10 20 30 40 50 70 80 90 100 110 120 bm0354 LIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|389 LIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYH 60 70 80 90 100 110 130 140 150 160 170 180 bm0354 NGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|389 NGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIQILN 120 130 140 150 160 170 bm0354 PNKMATLM :::::::: gi|389 PNKMATLM 180 >>gi|15030212|gb|AAH11365.1| Glyoxalase I [Homo sapiens] (184 aa) initn: 1253 init1: 1253 opt: 1253 Z-score: 1618.0 bits: 306.0 E(): 1.8e-81 Smith-Waterman score: 1253; 99.457% identity (99.457% similar) in 184 aa overlap (5-188:1-184) 10 20 30 40 50 60 bm0354 CSAAMAEPQPPSGGLTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMT :::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|150 MAEPQPPSGGLTDEAALSYCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMT 10 20 30 40 50 70 80 90 100 110 120 bm0354 LIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|150 LIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYH 60 70 80 90 100 110 130 140 150 160 170 180 bm0354 NGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|150 NGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN 120 130 140 150 160 170 bm0354 PNKMATLM :::::::: gi|150 PNKMATLM 180 >>gi|75076014|sp|Q4R5F2|LGUL_MACFA Lactoylglutathione ly (184 aa) initn: 1247 init1: 1247 opt: 1247 Z-score: 1610.2 bits: 304.6 E(): 4.8e-81 Smith-Waterman score: 1247; 97.826% identity (99.457% similar) in 184 aa overlap (5-188:1-184) 10 20 30 40 50 60 bm0354 CSAAMAEPQPPSGGLTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 MAEPQPPSGGLTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMT 10 20 30 40 50 70 80 90 100 110 120 bm0354 LIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYH :::::::: ::::::::::::::::::.:.:::::::::::::::::::::::::::::: gi|750 LIQKCDFPAMKFSLYFLAYEDKNDIPKDKEEKIAWALSRKATLELTHNWGTEDDETQSYH 60 70 80 90 100 110 130 140 150 160 170 180 bm0354 NGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|750 NGNSDPRGFGHIGIAVPDVHSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN 120 130 140 150 160 170 bm0354 PNKMATLM :::::::: gi|750 PNKMATLM 180 >>gi|133777508|gb|AAI23483.1| GLO1 protein [Bos taurus] (184 aa) initn: 1173 init1: 1173 opt: 1173 Z-score: 1515.0 bits: 287.0 E(): 9.6e-76 Smith-Waterman score: 1173; 89.674% identity (96.739% similar) in 184 aa overlap (5-188:1-184) 10 20 30 40 50 60 bm0354 CSAAMAEPQPPSGGLTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMT :::::: ::::::::::::::: :::::::::::::::.::::::::::::.:::: gi|133 MAEPQPASGGLTDEAALSCCSDPDPSTKDFLLQQTMLRIKDPKKSLDFYTRILGMT 10 20 30 40 50 70 80 90 100 110 120 bm0354 LIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYH :.:: ::: ::::::::::::::::::.::::.::..::::::::::::::::::::::: gi|133 LLQKLDFPTMKFSLYFLAYEDKNDIPKDKDEKVAWVFSRKATLELTHNWGTEDDETQSYH 60 70 80 90 100 110 130 140 150 160 170 180 bm0354 NGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILN .::::::::::::::::::..:::::::::.::::::::::::::::::::::::::::: gi|133 SGNSDPRGFGHIGIAVPDVHGACKRFEELGIKFVKKPDDGKMKGLAFIQDPDGYWIEILN 120 130 140 150 160 170 bm0354 PNKMATLM :: : :.. gi|133 PNTMITII 180 188 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Thu Aug 7 16:44:00 2008 done: Thu Aug 7 16:47:00 2008 Total Scan time: 626.140 Total Display time: 0.020 Function used was FASTA [version 34.26.5 April 26, 2007]