hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/TIGRFAMs_HMM.LIB.bin Sequence file: /db/iprscan/tmp/20080807/iprscan-20080807-16470173/chunk_1/iprscan-20080807-16470173.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: bm03544 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TIGR00068 glyox_I: lactoylglutathione lyase 407.1 8.4e-120 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TIGR00068 1/1 10 188 .] 1 181 [. 407.1 8.4e-120 Alignments of top-scoring domains: TIGR00068: domain 1 of 1, from 10 to 188: score 407.1, E = 8.4e-120 *->MA.eskespeanlgldlvedektkkyrlLhTMlRVGDldkSldFYte ++++++++ea+l++++++d++tk+++l++TMlRV+D++kSldFYt+ bm03544 10 -PpSGGLTDEAALSCCSDADPSTKDFLLQQTMLRVKDPKKSLDFYTR 55 VLGMkLLRkkDfPemkfsLAFlGYgdessaPkdkdEriaWtlsrkaviEL VLGM+L++k+DfP+mkfsL+Fl+Y+d++++Pk+kdE+iaW+lsrka++EL bm03544 56 VLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLEL 105 TyNWGtekDefkgYdlGnSePRGFGHIaigVdDvykaCervrakGGnVvR T+NWGte+De+++Y++GnS+PRGFGHI+i+V+Dvy+aC+r++++G+++v+ bm03544 106 THNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 155 epGPvkGGttvIAFveDPDGYkIEliqrkstkdgl<-* +p ++G+++++AF++DPDGY+IE+++++++++++ bm03544 156 KP--DDGKMKGLAFIQDPDGYWIEILNPNKMATLM 188 //