# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm03735.fasta.nr -Q bm03735.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm03735, 543 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6820031 sequences Expectation_n fit: rho(ln(x))= 6.3981+/-0.000203; mu= 7.5658+/- 0.011 mean_var=129.7592+/-24.820, 0's: 30 Z-trim: 44 B-trim: 89 in 1/65 Lambda= 0.112591 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|17511732|gb|AAH18722.1| Alveolar soft part sarc ( 553) 3677 608.5 1.4e-171 gi|74717746|sp|Q9BZE9.1|ASPC1_HUMAN Tether contain ( 553) 3668 607.0 3.7e-171 gi|114671054|ref|XP_001166432.1| PREDICTED: simila ( 550) 3408 564.8 1.9e-158 gi|114671056|ref|XP_523749.2| PREDICTED: similar t ( 476) 3106 515.7 1e-143 gi|16553095|dbj|BAB71472.1| unnamed protein produc ( 647) 3012 500.6 5e-139 gi|114671052|ref|XP_001166315.1| PREDICTED: hypoth ( 644) 2756 459.0 1.6e-126 gi|119610137|gb|EAW89731.1| alveolar soft part sar ( 403) 2577 429.7 6.6e-118 gi|16553814|dbj|BAB71595.1| unnamed protein produc ( 501) 2433 406.4 8.5e-111 gi|109492391|ref|XP_001081837.1| PREDICTED: simila ( 551) 2430 406.0 1.3e-110 gi|148745003|gb|AAI42389.1| ASPSCR1 protein [Bos t ( 552) 2407 402.2 1.7e-109 gi|81879179|sp|Q8VBT9.1|ASPC1_MOUSE Tether contain ( 550) 2373 396.7 7.8e-108 gi|194216521|ref|XP_001489342.2| PREDICTED: simila ( 553) 2332 390.0 7.9e-106 gi|148702838|gb|EDL34785.1| alveolar soft part sar ( 532) 2326 389.0 1.5e-105 gi|114671060|ref|XP_001166344.1| PREDICTED: hypoth ( 501) 2325 388.9 1.6e-105 gi|31417206|gb|AAH06152.1| ASPSCR1 protein [Homo s ( 348) 2132 357.4 3.4e-96 gi|109492396|ref|XP_001081835.1| PREDICTED: simila ( 489) 2093 351.2 3.5e-94 gi|171846680|gb|AAI62026.1| Aspscr1 protein [Rattu ( 467) 1967 330.7 4.9e-88 gi|37704771|gb|AAR01613.1| TUG short isoform [Mus ( 473) 1941 326.5 9.3e-87 gi|109489511|ref|XP_001076577.1| PREDICTED: simila ( 606) 1887 317.8 4.9e-84 gi|109119159|ref|XP_001112862.1| PREDICTED: simila ( 447) 1760 297.0 6.3e-78 gi|148702839|gb|EDL34786.1| alveolar soft part sar ( 574) 1709 288.9 2.4e-75 gi|149055064|gb|EDM06881.1| rCG35155 [Rattus norve ( 575) 1705 288.2 3.7e-75 gi|109492400|ref|XP_001081829.1| PREDICTED: simila ( 411) 1656 280.1 7.3e-73 gi|109492394|ref|XP_001081833.1| PREDICTED: simila ( 530) 1625 275.2 2.9e-71 gi|47223847|emb|CAG06024.1| unnamed protein produc ( 545) 1556 264.0 6.9e-68 gi|54038071|gb|AAH84345.1| LOC495145 protein [Xeno ( 559) 1452 247.1 8.6e-63 gi|73964673|ref|XP_855713.1| PREDICTED: similar to ( 467) 1435 244.3 5.1e-62 gi|73964675|ref|XP_533134.2| PREDICTED: similar to ( 544) 1435 244.3 5.7e-62 gi|12835730|dbj|BAB23341.1| unnamed protein produc ( 252) 1412 240.3 4.4e-61 gi|109492398|ref|XP_001081832.1| PREDICTED: simila ( 453) 1191 204.6 4.3e-50 gi|118099685|ref|XP_415639.2| PREDICTED: similar t ( 576) 1145 197.2 9e-48 gi|74222108|dbj|BAE26870.1| unnamed protein produc ( 452) 1139 196.2 1.5e-47 gi|169218051|ref|XP_001720260.1| PREDICTED: hypoth ( 166) 1099 189.3 6.5e-46 gi|89273958|emb|CAJ83670.1| alveolar soft part sar ( 564) 886 155.2 4.1e-35 gi|123287392|emb|CAM27106.1| alveolar soft part sa ( 226) 816 143.4 5.6e-32 gi|62204278|gb|AAH92736.1| Zgc:110112 [Danio rerio ( 584) 792 139.9 1.7e-30 gi|123287399|emb|CAM27113.1| alveolar soft part sa ( 220) 536 97.9 2.7e-18 gi|123287396|emb|CAM27110.1| alveolar soft part sa ( 177) 531 97.0 4.1e-18 gi|123287397|emb|CAM27111.1| alveolar soft part sa ( 178) 531 97.0 4.1e-18 gi|123287398|emb|CAM27112.1| alveolar soft part sa ( 181) 531 97.0 4.1e-18 gi|93278688|pdb|2AL3|A Chain A, Solution Structure ( 90) 515 94.2 1.5e-17 gi|156224033|gb|EDO44862.1| predicted protein [Nem ( 575) 513 94.6 7.2e-17 gi|91078460|ref|XP_967570.1| PREDICTED: similar to ( 514) 434 81.7 4.8e-13 gi|108871143|gb|EAT35368.1| conserved hypothetical ( 509) 418 79.1 2.9e-12 gi|167864633|gb|EDS28016.1| tether containing UBX ( 505) 416 78.8 3.6e-12 gi|72085085|ref|XP_793936.1| PREDICTED: hypothetic ( 351) 410 77.7 5.5e-12 gi|190614829|gb|EDV30353.1| GF22989 [Drosophila an ( 478) 408 77.5 8.6e-12 gi|194182872|gb|EDW96483.1| GE25856 [Drosophila ya ( 478) 392 74.9 5.2e-11 gi|194169482|gb|EDW84383.1| GK13175 [Drosophila wi ( 480) 391 74.7 5.8e-11 gi|23175899|gb|AAG22134.2| CG33722-PC, isoform C [ ( 478) 390 74.5 6.5e-11 >>gi|17511732|gb|AAH18722.1| Alveolar soft part sarcoma (553 aa) initn: 3677 init1: 3677 opt: 3677 Z-score: 3235.8 bits: 608.5 E(): 1.4e-171 Smith-Waterman score: 3677; 100.000% identity (100.000% similar) in 543 aa overlap (1-543:11-553) 10 20 30 40 50 bm0373 AVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLD :::::::::::::::::::::::::::::::::::::::::::::::::: gi|175 MAAPAGGGGSAVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLD 10 20 30 40 50 60 60 70 80 90 100 110 bm0373 LSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|175 LSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSH 70 80 90 100 110 120 120 130 140 150 160 170 bm0373 FPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|175 FPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVGK 130 140 150 160 170 180 180 190 200 210 220 230 bm0373 TPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|175 TPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAA 190 200 210 220 230 240 240 250 260 270 280 290 bm0373 PFVPFSGGGQRQGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|175 PFVPFSGGGQRQGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERE 250 260 270 280 290 300 300 310 320 330 340 350 bm0373 RDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|175 RDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLK 310 320 330 340 350 360 360 370 380 390 400 410 bm0373 SERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|175 SERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFV 370 380 390 400 410 420 420 430 440 450 460 470 bm0373 RSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|175 RSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHA 430 440 450 460 470 480 480 490 500 510 520 530 bm0373 ISPSAADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|175 ISPSAADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLG 490 500 510 520 530 540 540 bm0373 KVPKWLKLPASKR ::::::::::::: gi|175 KVPKWLKLPASKR 550 >>gi|74717746|sp|Q9BZE9.1|ASPC1_HUMAN Tether containing (553 aa) initn: 3668 init1: 3668 opt: 3668 Z-score: 3227.9 bits: 607.0 E(): 3.7e-171 Smith-Waterman score: 3668; 99.816% identity (99.816% similar) in 543 aa overlap (1-543:11-553) 10 20 30 40 50 bm0373 AVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLD :::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 MAAPAGGGGSAVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLD 10 20 30 40 50 60 60 70 80 90 100 110 bm0373 LSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 LSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSH 70 80 90 100 110 120 120 130 140 150 160 170 bm0373 FPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 FPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVGK 130 140 150 160 170 180 180 190 200 210 220 230 bm0373 TPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 TPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAA 190 200 210 220 230 240 240 250 260 270 280 290 bm0373 PFVPFSGGGQRQGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERE ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: gi|747 PFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERE 250 260 270 280 290 300 300 310 320 330 340 350 bm0373 RDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 RDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLK 310 320 330 340 350 360 360 370 380 390 400 410 bm0373 SERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 SERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFV 370 380 390 400 410 420 420 430 440 450 460 470 bm0373 RSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 RSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHA 430 440 450 460 470 480 480 490 500 510 520 530 bm0373 ISPSAADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 ISPSAADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLG 490 500 510 520 530 540 540 bm0373 KVPKWLKLPASKR ::::::::::::: gi|747 KVPKWLKLPASKR 550 >>gi|114671054|ref|XP_001166432.1| PREDICTED: similar to (550 aa) initn: 3408 init1: 3408 opt: 3408 Z-score: 2999.7 bits: 564.8 E(): 1.9e-158 Smith-Waterman score: 3408; 96.917% identity (98.073% similar) in 519 aa overlap (25-543:32-550) 10 20 30 40 50 bm0373 AVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLDLSLQ :::::::::::::::::::::::::::::: gi|114 GVFPEASTKPLLSMGWCGKSLSACGSAGAPVLEDTCRRQDFNPCEYDLKFQRSVLDLSLQ 10 20 30 40 50 60 60 70 80 90 100 110 bm0373 WRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSHFPQI ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 WRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSHFPQT 70 80 90 100 110 120 120 130 140 150 160 170 bm0373 RECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVGKTPGS ::::::::::::::::::::::::::::::::: ::::::::::::::: :::::::::: gi|114 RECLQHPGGATPVCVYTRDEVTGEAALRGTTLQLLGLTGGSATIRFVMKRYDPVGKTPGS 130 140 150 160 170 180 180 190 200 210 220 230 bm0373 LGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAAPFVP :::::::::::::::::::::::::::::: ::::::::::::::::::::::. ::::: gi|114 LGSSASAGQAAASAPLPLESGELSRGDLSRREDADTSGPCCEHTQEKQSTRAPVPAPFVP 190 200 210 220 230 240 240 250 260 270 280 290 bm0373 FSGGGQRQGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERERDPQ ::::::: ::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|114 FSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQEQERDPQ 250 260 270 280 290 300 300 310 320 330 340 350 bm0373 QEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLKSERK :::::.: .: :::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QEQERQRDADGPPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLKSERK 310 320 330 340 350 360 360 370 380 390 400 410 bm0373 RLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFVRSHL ::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::: gi|114 RLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGCFRPSETVGDLRDFVRSHL 370 380 390 400 410 420 420 430 440 450 460 470 bm0373 GNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHAISPS ::::::::::.::::::::::::::::::::::::::.:::::::::::::::::::::: gi|114 GNPELSFYLFVTPPKTVLDDHTQTLFQANLFPAALVHFGAEEPAGVYLEPGLLEHAISPS 430 440 450 460 470 480 480 490 500 510 520 530 bm0373 AADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLGKVPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLGKVPK 490 500 510 520 530 540 540 bm0373 WLKLPASKR ::::::::: gi|114 WLKLPASKR 550 >>gi|114671056|ref|XP_523749.2| PREDICTED: similar to al (476 aa) initn: 3106 init1: 3106 opt: 3106 Z-score: 2735.4 bits: 515.7 E(): 1e-143 Smith-Waterman score: 3106; 96.639% identity (97.899% similar) in 476 aa overlap (68-543:1-476) 40 50 60 70 80 90 bm0373 CEYDLKFQRSVLDLSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDS :::::::::::::::::::::::::::::: gi|114 MVPASRSREGPENMVRIALQLDDGSRLQDS 10 20 30 100 110 120 130 140 150 bm0373 FCSGQTLWELLSHFPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSAT :::::::::::::::: ::::::::::::::::::::::::::::::::: ::::::::: gi|114 FCSGQTLWELLSHFPQTRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQLLGLTGGSAT 40 50 60 70 80 90 160 170 180 190 200 210 bm0373 IRFVMKCYDPVGKTPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEH :::::: :::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|114 IRFVMKRYDPVGKTPGSLGSSASAGQAAASAPLPLESGELSRGDLSRREDADTSGPCCEH 100 110 120 130 140 150 220 230 240 250 260 270 bm0373 TQEKQSTRAPAAAPFVPFSGGGQRQGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKS ::::::::::. :::::::::::: ::::::::::::::::::::::::::::::::::: gi|114 TQEKQSTRAPVPAPFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKS 160 170 180 190 200 210 280 290 300 310 320 330 bm0373 GQDPQQEQEQERERDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFEL :::::::::::.::::::::::.: .: ::::::::::::::::::::::::::::::: gi|114 GQDPQQEQEQEQERDPQQEQERQRDADGPPVDREPVVCHPDLEERLQAWPAELPDEFFEL 220 230 240 250 260 270 340 350 360 370 380 390 bm0373 TVDDVRRRLAQLKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|114 TVDDVRRRLAQLKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGCF 280 290 300 310 320 330 400 410 420 430 440 450 bm0373 RPSETVGDLRDFVRSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALVHLGAEEP :::::::::::::::::::::::::::.::::::::::::::::::::::::::.::::: gi|114 RPSETVGDLRDFVRSHLGNPELSFYLFVTPPKTVLDDHTQTLFQANLFPAALVHFGAEEP 340 350 360 370 380 390 460 470 480 490 500 510 bm0373 AGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEEGALVPPEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEEGALVPPEP 400 410 420 430 440 450 520 530 540 bm0373 IPGTAQPVKRSLGKVPKWLKLPASKR :::::::::::::::::::::::::: gi|114 IPGTAQPVKRSLGKVPKWLKLPASKR 460 470 >>gi|16553095|dbj|BAB71472.1| unnamed protein product [H (647 aa) initn: 2988 init1: 2988 opt: 3012 Z-score: 2651.2 bits: 500.6 E(): 5e-139 Smith-Waterman score: 3470; 85.086% identity (85.086% similar) in 637 aa overlap (1-543:11-647) 10 20 30 40 50 bm0373 AVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLD :::::::::::::::::::::::::::::::::::::::::::::::::: gi|165 MAAPAGGGGSAVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLD 10 20 30 40 50 60 60 70 80 90 100 110 bm0373 LSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|165 LSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSH 70 80 90 100 110 120 120 130 140 150 160 170 bm0373 FPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|165 FPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVGK 130 140 150 160 170 180 180 190 200 210 220 230 bm0373 TPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|165 TPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAA 190 200 210 220 230 240 240 250 260 270 280 290 bm0373 PFVPFSGGGQRQGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERE ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: gi|165 PFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERE 250 260 270 280 290 300 300 310 320 330 340 350 bm0373 RDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|165 RDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLK 310 320 330 340 350 360 360 370 380 390 400 410 bm0373 SERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|165 SERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFV 370 380 390 400 410 420 420 430 440 bm0373 RSHLGNPELSFYLFITPPKTVLDDHTQTLFQ----------------------------- ::::::::::::::::::::::::::::::: gi|165 RSHLGNPELSFYLFITPPKTVLDDHTQTLFQPQLGDRVAPFTLGPSLKRCLGPEQRTRLP 430 440 450 460 470 480 bm0373 ------------------------------------------------------------ gi|165 VVGDGGDVDSGRLLFWGPSRGRASPSTGQPPCHPVCRPSSPPSPRPSSGDPSRVKAGHKH 490 500 510 520 530 540 450 460 470 480 490 bm0373 -----ANLFPAALVHLGAEEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPSPLPA ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|165 VGTGRANLFPAALVHLGAEEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPSPLPA 550 560 570 580 590 600 500 510 520 530 540 bm0373 PDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLGKVPKWLKLPASKR ::::::::::::::::::::::::::::::::::::::::::::::: gi|165 PDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLGKVPKWLKLPASKR 610 620 630 640 >>gi|114671052|ref|XP_001166315.1| PREDICTED: hypothetic (644 aa) initn: 2732 init1: 2732 opt: 2756 Z-score: 2426.4 bits: 459.0 E(): 1.6e-126 Smith-Waterman score: 3210; 82.055% identity (83.034% similar) in 613 aa overlap (25-543:32-644) 10 20 30 40 50 bm0373 AVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLDLSLQ :::::::::::::::::::::::::::::: gi|114 GVFPEASTKPLLSMGWCGKSLSACGSAGAPVLEDTCRRQDFNPCEYDLKFQRSVLDLSLQ 10 20 30 40 50 60 60 70 80 90 100 110 bm0373 WRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSHFPQI ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 WRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSHFPQT 70 80 90 100 110 120 120 130 140 150 160 170 bm0373 RECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVGKTPGS ::::::::::::::::::::::::::::::::: ::::::::::::::: :::::::::: gi|114 RECLQHPGGATPVCVYTRDEVTGEAALRGTTLQLLGLTGGSATIRFVMKRYDPVGKTPGS 130 140 150 160 170 180 180 190 200 210 220 230 bm0373 LGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAAPFVP :::::::::::::::::::::::::::::: ::::::::::::::::::::::. ::::: gi|114 LGSSASAGQAAASAPLPLESGELSRGDLSRREDADTSGPCCEHTQEKQSTRAPVPAPFVP 190 200 210 220 230 240 240 250 260 270 280 290 bm0373 FSGGGQRQGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERERDPQ ::::::: ::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|114 FSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQEQERDPQ 250 260 270 280 290 300 300 310 320 330 340 350 bm0373 QEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLKSERK :::::.: .: :::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QEQERQRDADGPPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLKSERK 310 320 330 340 350 360 360 370 380 390 400 410 bm0373 RLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFVRSHL ::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::: gi|114 RLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGCFRPSETVGDLRDFVRSHL 370 380 390 400 410 420 420 430 440 bm0373 GNPELSFYLFITPPKTVLDDHTQTLFQ--------------------------------- ::::::::::.:::::::::::::::: gi|114 GNPELSFYLFVTPPKTVLDDHTQTLFQPQLGDRVAPFTLGPSLKWCLGPEQRTPLPVVGD 430 440 450 460 470 480 bm0373 ------------------------------------------------------------ gi|114 GGDVDSGRLLFWGPSRGRASPSTGQPSCHPVCRPSSPPSPRPSSGDPSRVKAGHKHVGTG 490 500 510 520 530 540 450 460 470 480 490 500 bm0373 -ANLFPAALVHLGAEEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPSPLPAPDPA ::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RANLFPAALVHFGAEEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPSPLPAPDPA 550 560 570 580 590 600 510 520 530 540 bm0373 PKSEPAAEEGALVPPEPIPGTAQPVKRSLGKVPKWLKLPASKR ::::::::::::::::::::::::::::::::::::::::::: gi|114 PKSEPAAEEGALVPPEPIPGTAQPVKRSLGKVPKWLKLPASKR 610 620 630 640 >>gi|119610137|gb|EAW89731.1| alveolar soft part sarcoma (403 aa) initn: 2577 init1: 2577 opt: 2577 Z-score: 2271.9 bits: 429.7 E(): 6.6e-118 Smith-Waterman score: 2577; 99.738% identity (99.738% similar) in 381 aa overlap (1-381:11-391) 10 20 30 40 50 bm0373 AVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLD :::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MAAPAGGGGSAVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLD 10 20 30 40 50 60 60 70 80 90 100 110 bm0373 LSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSH 70 80 90 100 110 120 120 130 140 150 160 170 bm0373 FPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVGK 130 140 150 160 170 180 180 190 200 210 220 230 bm0373 TPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAA 190 200 210 220 230 240 240 250 260 270 280 290 bm0373 PFVPFSGGGQRQGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERE ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERE 250 260 270 280 290 300 300 310 320 330 340 350 bm0373 RDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLK 310 320 330 340 350 360 360 370 380 390 400 410 bm0373 SERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFV ::::::::::::::::::::::::::::::: gi|119 SERKRLEEAPLVTKAFREAQIKEKLERYPKVCRQDVGATEAQL 370 380 390 400 420 430 440 450 460 470 bm0373 RSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHA >>gi|16553814|dbj|BAB71595.1| unnamed protein product [H (501 aa) initn: 3296 init1: 2404 opt: 2433 Z-score: 2144.3 bits: 406.4 E(): 8.5e-111 Smith-Waterman score: 3130; 94.212% identity (94.212% similar) in 501 aa overlap (68-543:1-501) 40 50 60 70 80 90 bm0373 CEYDLKFQRSVLDLSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDS :::::::::::::::::::::::::::::: gi|165 MVPASRSREGPENMVRIALQLDDGSRLQDS 10 20 30 100 110 120 130 140 150 bm0373 FCSGQTLWELLSHFPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|165 FCSGQTLWELLSHFPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSAT 40 50 60 70 80 90 160 170 180 190 200 210 bm0373 IRFVMKCYDPVGKTPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|165 IRFVMKCYDPVGKTPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEH 100 110 120 130 140 150 220 230 240 250 260 270 bm0373 TQEKQSTRAPAAAPFVPFSGGGQRQGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKS :::::::::::::::::::::::: :::: :::::::::::::::::::::::::::::: gi|165 TQEKQSTRAPAAAPFVPFSGGGQRLGGPPEPTRPLTSSSAKLPKSLSSPGGPSKPKKSKS 160 170 180 190 200 210 280 290 300 310 320 330 bm0373 GQDPQQEQEQERERDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|165 GQDPQQEQEQERERDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFEL 220 230 240 250 260 270 340 350 360 370 380 390 bm0373 TVDDVRRRLAQLKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|165 TVDDVRRRLAQLKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFF 280 290 300 310 320 330 400 410 420 430 bm0373 RPSETVGDLRDFVRSHLGNPELSFYL-------------------------FITPPKTVL :::::::::::::::::::::::::: :::::::: gi|165 RPSETVGDLRDFVRSHLGNPELSFYLCLSSFGRMDGRGPRCFLTRRCLLSSVITPPKTVL 340 350 360 370 380 390 440 450 460 470 480 490 bm0373 DDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPS : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|165 DGHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPS 400 410 420 430 440 450 500 510 520 530 540 bm0373 PLPAPDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLGKVPKWLKLPASKR ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|165 PLPAPDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLGKVPKWLKLPASKR 460 470 480 490 500 >>gi|109492391|ref|XP_001081837.1| PREDICTED: similar to (551 aa) initn: 2500 init1: 1188 opt: 2430 Z-score: 2141.1 bits: 406.0 E(): 1.3e-110 Smith-Waterman score: 2722; 77.143% identity (83.929% similar) in 560 aa overlap (1-543:11-551) 10 20 30 40 50 bm0373 AVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLD ::::::::::::::::::::::::::::::::::::: ::::::::.::: gi|109 MAAPAGGGGSAVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPSEYDLKFQRTVLD 10 20 30 40 50 60 60 70 80 90 100 110 bm0373 LSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSH :::::::::::::::::::::::::::::: :::::::::: :::::::: :::::::.: gi|109 LSLQWRFANLPNNAKLEMVPASRSREGPENTVRIALQLDDGCRLQDSFCSRQTLWELLNH 70 80 90 100 110 120 120 130 140 150 160 170 bm0373 FPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVGK : : :: ::. : :::::: ::::::.:::..::::::::::::::::::.: :: .:: gi|109 FAQTRERLQQLGERTPVCVYMRDEVTGRAALQNTTLQSLGLTGGSATIRFVIKQYDTTGK 130 140 150 160 170 180 180 190 200 210 bm0373 T---------PGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSG------PCC ::: :: :: ::..: :::.:::.:::::.. :.::: : gi|109 QESIAVRSKPPGSPVSSMSADQASSSPLLPLNSGEFSRGDLNHQGGASTSGTSLKGGPKP 190 200 210 220 230 240 220 230 240 250 260 270 bm0373 EHTQEKQST-RAPAAAPFVPFSGGGQRQGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKK .: :::: . :.:::.:::::::: ::: : ::: .:: :.:.::::::::: gi|109 ADAQTKQSTTKESASAPFIPFSGGGQRLGGPSVSLRSLTSPAAKSSTSFSGPGGPSKPKK 250 260 270 280 290 300 280 290 300 310 320 330 bm0373 SKSGQDPQQEQEQERERDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEF :: :..: :: : : ::::.:::::::::. :: ::::.:::: gi|109 SKPGEEPPQEPE------P-------------PVDRDPVVCHPDLEDLLQPWPAEVPDEF 310 320 330 340 340 350 360 370 380 390 bm0373 FELTVDDVRRRLAQLKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQ ::.:::::::::::::::::::::::::::::::::.::::::::::::::::::::.:: gi|109 FEVTVDDVRRRLAQLKSERKRLEEAPLVTKAFREAQMKEKLERYPKVALRVLFPDRYILQ 350 360 370 380 390 400 400 410 420 430 440 450 bm0373 GFFRPSETVGDLRDFVRSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALVHLGA :::::::::::::::::::::::::::::::.::: :::::: ::::::::::::::.:: gi|109 GFFRPSETVGDLRDFVRSHLGNPELSFYLFIAPPKMVLDDHTLTLFQANLFPAALVHFGA 410 420 430 440 450 460 460 470 480 490 500 510 bm0373 EEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPSPLPAPDPAP-KSEPAAEEGALV :::.:.:::::::::..:::.::::::: ::::::::: ::::::. ::: :::::: gi|109 EEPTGLYLEPGLLEHTVSPSTADVLVARCMSRAAGSPSLLPAPDPVSLDSEPIAEEGALG 470 480 490 500 510 520 520 530 540 bm0373 PPEPIPGTAQPVKRSLGKVPKWLKLPASKR ::::: :::::::::::::::::::::::: gi|109 PPEPIQGTAQPVKRSLGKVPKWLKLPASKR 530 540 550 >>gi|148745003|gb|AAI42389.1| ASPSCR1 protein [Bos tauru (552 aa) initn: 2358 init1: 1177 opt: 2407 Z-score: 2120.9 bits: 402.2 E(): 1.7e-109 Smith-Waterman score: 2723; 75.579% identity (83.779% similar) in 561 aa overlap (1-543:11-552) 10 20 30 40 50 bm0373 AVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLD ::::::::::::::::::::::::::::::::::::: ::::::::.::: gi|148 MAAPAGGGGSAVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPNEYDLKFQRNVLD 10 20 30 40 50 60 60 70 80 90 100 110 bm0373 LSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSH ::.::::::::::::::::: :::::::::::::::::::::::::.:::::.::::: : gi|148 LSVQWRFANLPNNAKLEMVPISRSREGPENMVRIALQLDDGSRLQDTFCSGQSLWELLCH 70 80 90 100 110 120 120 130 140 150 160 170 bm0373 FPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVGK : ::::::..: :.::::: ::::::.:::..::::::::::::: ::: :: ::..: gi|148 FAQIRECLERPCEASPVCVYMRDEVTGRAALQSTTLQSLGLTGGSAIIRFSMKRCDPASK 130 140 150 160 170 180 180 190 200 210 bm0373 ---------TPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDA--------DTSGP .::: : :: :::.: :::.:. ::.::.:: ..: : :: gi|148 QEPGASWSKSPGSPTPSMSADQAASSPLLPLNSAGLSQGDVSRKDEAVSPGASRVDGLGP 190 200 210 220 230 240 220 230 240 250 260 270 bm0373 CCEHTQEKQSTRAPAAAPFVPFSGGGQRQGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPK .: :: .. : :::::::::::: :: : .::: :::::::::.:::.:::::: gi|148 KPADAQAKQISKEPPPAPFVPFSGGGQRLGGSSGSARPLMSSSAKLPKSFSSPAGPSKPK 250 260 270 280 290 300 280 290 300 310 320 330 bm0373 KSKSGQDPQQEQEQERERDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDE ::. ::.:: : : : ::::.::::::::: ::::::::::: gi|148 KSRPGQEPQPEPE------P-------------PVDRDPVVCHPDLEVLLQAWPAELPDE 310 320 330 340 340 350 360 370 380 390 bm0373 FFELTVDDVRRRLAQLKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVL :::.:::::::::::::::::::::::::::::::::.::::.:::::.:::::::::.: gi|148 FFEVTVDDVRRRLAQLKSERKRLEEAPLVTKAFREAQMKEKLQRYPKVVLRVLFPDRYIL 350 360 370 380 390 400 400 410 420 430 440 450 bm0373 QGFFRPSETVGDLRDFVRSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALVHLG :::::::::::::::::::::::::: :::::.::::.::::: :::::::::.::::.: gi|148 QGFFRPSETVGDLRDFVRSHLGNPELPFYLFIAPPKTILDDHTLTLFQANLFPTALVHFG 410 420 430 440 450 460 460 470 480 490 500 510 bm0373 AEEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPSPLPAPDPAPKS-EPAAEEGAL :::.: :::: ::::..::::::::::: :::::::: : ::::::: . :::::::: gi|148 PEEPTGSYLEPRLLEHTVSPSAADVLVARCMSRAAGSPPPPPAPDPAPLDLEPAAEEGAA 470 480 490 500 510 520 520 530 540 bm0373 VPPEPIPGTAQPVKRSLGKVPKWLKLPASKR :::: ::.:::.:.::::::::::::.:: gi|148 GPPEPSRGTTQPVRRDLGKVPKWLKLPAGKR 530 540 550 543 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Thu Aug 7 17:19:52 2008 done: Thu Aug 7 17:22:10 2008 Total Scan time: 915.840 Total Display time: 0.180 Function used was FASTA [version 34.26.5 April 26, 2007]