hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-17334460/chunk_1/iprscan-20080807-17334460.nocrc
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Query sequence: bm03760
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00355                                                 379.6   1.9e-109  15
SM00349                                                 143.5    2.3e-38   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00349      1/1      23    83 ..     1    62 []   143.5  2.3e-38
SM00355      1/15    235   257 ..     1    23 []    20.9     0.18
SM00355      2/15    263   285 ..     1    23 []    24.7    0.013
SM00355      3/15    291   313 ..     1    23 []    24.7    0.013
SM00355      4/15    319   341 ..     1    23 []    30.0  0.00033
SM00355      5/15    347   369 ..     1    23 []    30.0  0.00033
SM00355      6/15    375   397 ..     1    23 []    25.5   0.0072
SM00355      7/15    403   425 ..     1    23 []    28.0   0.0013
SM00355      8/15    431   453 ..     1    23 []    25.9   0.0055
SM00355      9/15    459   481 ..     1    23 []    26.6   0.0033
SM00355     10/15    487   509 ..     1    23 []    27.9   0.0014
SM00355     11/15    515   537 ..     1    23 []    22.6    0.055
SM00355     12/15    543   565 ..     1    23 []    28.8  0.00075
SM00355     13/15    571   593 ..     1    23 []    25.2   0.0094
SM00355     14/15    599   621 ..     1    23 []    18.3      1.1
SM00355     15/15    627   652 ..     1    23 []    20.5     0.24

Alignments of top-scoring domains:
SM00349: domain 1 of 1, from 23 to 83: score 143.5, E = 2.3e-38
                   *->VtFeDVAVdFsqEEWeqLDpaQrnLYRdVMlENYsnLvSLGgfqvsk
                      ++F+DVAVdF+q+EW++L paQr+LYR+VMlENYsnLvSLG  ++sk
     bm03760    23    MAFRDVAVDFTQDEWRLLSPAQRTLYREVMLENYSNLVSLG-ISFSK 68   

                   pdliskLEqgeEpwi<-*
                   p+li++LEqg+E w    
     bm03760    69 PELITQLEQGKETWR    83   

SM00355: domain 1 of 15, from 235 to 257: score 20.9, E = 0.18
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                        C + Cg sfs  ++L  H+r+H   
     bm03760   235    VNCGE-CGLSFSKMtNLLSHQRIH    257  

SM00355: domain 2 of 15, from 263 to 285: score 24.7, E = 0.013
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C + C k fs k++L rH++ H   
     bm03760   263    YVCGV-CEKGFSLKkSLARHQKAH    285  

SM00355: domain 3 of 15, from 291 to 313: score 24.7, E = 0.013
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                       +C + Cg+ f++k+ L+ H r+H   
     bm03760   291    IVCRE-CGRGFNRKsTLIIHERTH    313  

SM00355: domain 4 of 15, from 319 to 341: score 30.0, E = 0.00033
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y C++ Cg+ fs+k++L+ H+r+H   
     bm03760   319    YMCSE-CGRGFSQKsNLIIHQRTH    341  

SM00355: domain 5 of 15, from 347 to 369: score 30.0, E = 0.00033
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C + Cgk fs+k+a +rH+r+H   
     bm03760   347    YVCRE-CGKGFSQKsAVVRHQRTH    369  

SM00355: domain 6 of 15, from 375 to 397: score 25.5, E = 0.0072
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                       +C+  Cg  fs++++L+ H+r+H   
     bm03760   375    IVCSD-CGLGFSDRsNLISHQRTH    397  

SM00355: domain 7 of 15, from 403 to 425: score 28.0, E = 0.0013
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y C++ Cg++f++++ L++H+r+H   
     bm03760   403    YACKE-CGRCFRQRtTLVNHQRTH    425  

SM00355: domain 8 of 15, from 431 to 453: score 25.9, E = 0.0055
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C + Cg sfs+ + L+ H r+H   
     bm03760   431    YVCGV-CGHSFSQNsTLISHRRTH    453  

SM00355: domain 9 of 15, from 459 to 481: score 26.6, E = 0.0033
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C + Cg+ fs k++L+rH+ +H   
     bm03760   459    YVCGV-CGRGFSLKsHLNRHQNIH    481  

SM00355: domain 10 of 15, from 487 to 509: score 27.9, E = 0.0014
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                       +C+  Cg+ fs++++L+rH+r+H   
     bm03760   487    IVCKD-CGRGFSQQsNLIRHQRTH    509  

SM00355: domain 11 of 15, from 515 to 537: score 22.6, E = 0.055
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                       +C + Cg+ fs+k++L+ H+r+H   
     bm03760   515    MVCGE-CGRGFSQKsNLVAHQRTH    537  

SM00355: domain 12 of 15, from 543 to 565: score 28.8, E = 0.00075
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C + Cg+ fs++  L+rH r+H   
     bm03760   543    YVCRE-CGRGFSHQaGLIRHKRKH    565  

SM00355: domain 13 of 15, from 571 to 593: score 25.2, E = 0.0094
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y C + Cg  f +k+aL+ H r H   
     bm03760   571    YMCRQ-CGLGFGNKsALITHKRAH    593  

SM00355: domain 14 of 15, from 599 to 621: score 18.3, E = 1.1
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                       +C + Cg+ f +k++L+ H+++H   
     bm03760   599    CVCRE-CGQGFLQKsHLTLHQMTH    621  

SM00355: domain 15 of 15, from 627 to 652: score 20.5, E = 0.24
                   *->ykCpigCgksfssk.aLkrHmr...vH<-*
                      y+C+  Cg+ fs k++L rH ++++vH   
     bm03760   627    YVCKT-CGRGFSLKsHLSRHRKttsVH    652  

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