hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-17444250/chunk_1/iprscan-20080807-17444250.nocrc
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Query sequence: bm03803
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00387                                                  29.4     0.0005   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00387      1/1     107   260 ..     1   130 []    29.4   0.0005

Alignments of top-scoring domains:
SM00387: domain 1 of 1, from 107 to 260: score 29.4, E = 0.0005
                   *->gDpdrLrqvlsNLldNAikftpegladskllsgkdgggtitvsle..
                        ++++r+++sN+ d   k  ++ ++d+    +  ++ +i++  + +
     bm03803   107    EKEVFIRELISNASDALEKLRHKLVSDG----QALPEMEIHLQTNae 149  

                   ..vitVeDnGpGIppeih.k...si.edleriFepFfrtdgspsrdrpgs
                   +++it++D+G+G+++e++  + ++i    ++ F    +   +       +
     bm03803   150 kgTITIQDTGIGMTQEELvSnlgTIaRSGSKAFLDALQNQAE-------A 192  

                   rsrktgGGLtGLGLaivkrlvelhgGeisve...................
                   +s  +g+  +G+G++ + +++++ ++  +   +++ + +  +++++  + 
     bm03803   193 SSKIIGQ--FGVGFYSAFMVADRVEVYSRSAapgslgyqwlsdgsgvfei 240  

                   .........ttFtitlPlel<-*
                    + ++ +++t+++i+l+      
     bm03803   241 aeasgvrtgTKIIIHLKSDC    260  

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