hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-18475461/chunk_1/iprscan-20080807-18475461.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: bm04182
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
PF00596.11.fs Class II Aldolase and Adducin N-terminal    235.0    7.8e-69   1
PF00596.11.ls Class II Aldolase and Adducin N-terminal    236.9      4e-68   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
PF00596.11.fs   1/1     140   339 ..     1   229 []   235.0  7.8e-69
PF00596.11.ls   1/1     140   339 ..     1   229 []   236.9    4e-68

Alignments of top-scoring domains:
PF00596.11.fs: domain 1 of 1, from 140 to 339: score 235.0, E = 7.8e-69
                   *->qelaaacrllalyGLvtgtaGniSvrvrergeqdlflIkPsGvpyde
                      ++la+++rl +l+G++    ++iSvr++ +  qd++ I P G++++e
     bm04182   140    CKLASLYRLVDLFGWAHLANTYISVRISKE--QDHIIIIPRGLSFSE 184  

                   mtasDlvvvDldgGevleGespgetkflkPssetplHlalYrarPdvgai
                    tas+lv+v+++g++v++G+    t+ +++ +++  H+a+Y +rPdv+++
     bm04182   185 ATASNLVKVNIIGEVVDQGS----TNLKIDHTGFSPHAAIYSTRPDVKCV 230  

                   vHtHsphatalSqlgeglpplgtthadyfgvmrygdvpctdyagYdeEiv
                   +H+H+ + +a+S++++g++p++++++ ++      dv+++dy+g      
     bm04182   231 IHIHTLATAAVSSMKCGILPISQESLLLG------DVAYYDYQG-----S 269  

                   gdyeenTGgEkVevellakalgapkgrpAvLlrnHGpvtwGkdaetaeeA
                    ++ e       e+  l+k+lg++++  +++lrnHG+v+ G   et+eeA
     bm04182   270 LEEQE-------ERIQLQKVLGPSCK--VLVLRNHGVVALG---ETLEEA 307  

                   avvleeveraaeiqlllksagipmdplllpke<-*
                   + ++++v+ a+eiq+++++++ ++d+l  ++    
     bm04182   308 FHYIFNVQLACEIQVQALAGAGGVDNLHVLDF    339  

PF00596.11.ls: domain 1 of 1, from 140 to 339: score 236.9, E = 4e-68
                   *->qelaaacrllalyGLvtgtaGniSvrvrergeqdlflIkPsGvpyde
                      ++la+++rl +l+G++    ++iSvr++ +  qd++ I P G++++e
     bm04182   140    CKLASLYRLVDLFGWAHLANTYISVRISKE--QDHIIIIPRGLSFSE 184  

                   mtasDlvvvDldgGevleGespgetkflkPssetplHlalYrarPdvgai
                    tas+lv+v+++g++v++G+    t+ +++ +++  H+a+Y +rPdv+++
     bm04182   185 ATASNLVKVNIIGEVVDQGS----TNLKIDHTGFSPHAAIYSTRPDVKCV 230  

                   vHtHsphatalSqlgeglpplgtthadyfgvmrygdvpctdyagYdeEiv
                   +H+H+ + +a+S++++g++p++++++ ++      dv+++dy+g      
     bm04182   231 IHIHTLATAAVSSMKCGILPISQESLLLG------DVAYYDYQG-----S 269  

                   gdyeenTGgEkVevellakalgapkgrpAvLlrnHGpvtwGkdaetaeeA
                    ++ e       e+  l+k+lg++++  +++lrnHG+v+ G   et+eeA
     bm04182   270 LEEQE-------ERIQLQKVLGPSCK--VLVLRNHGVVALG---ETLEEA 307  

                   avvleeveraaeiqlllksagipmdplllpke<-*
                   + ++++v+ a+eiq+++++++ ++d+l  ++    
     bm04182   308 FHYIFNVQLACEIQVQALAGAGGVDNLHVLDF    339  

//