hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-00194834/chunk_1/iprscan-20090618-00194834.nocrc
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Query sequence: bm04184
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00730                                                 477.3   7.4e-139   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00730    1/1     164   462 ..     1   348 []   477.3 7.4e-139

Alignments of top-scoring domains:
SM00730: domain 1 of 1, from 164 to 462: score 477.3, E = 7.4e-139
                   *->ldsllnslvaivfiivatvvLvlLYkfrkflsKeykvivlwiifssl
                      l+s+ln+l++i++i+v+t++Lv+LYk+r+     yk+i++w+i+ssl
     bm04184   164    LNSVLNTLIMISVIVVMTIFLVVLYKYRC-----YKFIHGWLIMSSL 205  

                   gvlflysllyplevfktyfllpfrpcgwpqkpikfpfcggkmeeGkkein
                   ++lfl++++y++ev+kty                               n
     bm04184   206 MLLFLFTYIYLGEVLKTY-------------------------------N 224  

                   vpvdyitllilllnfgvvgvwcihrkg.laWiqqdligisllmalvfilr
                   v++dy+tll++ +nfg vg+ cih+kg+l ++q++li+is+lmalvfi++
     bm04184   225 VAMDYPTLLLTVWNFGAVGMVCIHWKGpLVLQQAYLIMISALMALVFIKY 274  

                   LPsGewtawiLLgaLfiYDifaVfgtpyifkGPlrvMVevAqgrnepalp
                   LP  ew+aw++Lga+++YD++aV+++    kGPlr++Ve+Aq+rnep   
     bm04184   275 LP--EWSAWVILGAISVYDLVAVLCP----KGPLRMLVETAQERNEP--- 315  

                   vklvfPallyssrmvwavgqrnmads........................
                      +fPal+yss+mvw+vg   ma+ ++++++  + + +++ ++++ ++ 
     bm04184   316 ---IFPALIYSSAMVWTVG---MAKLdpssqgalqlpydpemeedsydsf 359  

                   .........slgaeqstreeRraveeessleprlgntraeaelsalsdee
                   ++++ ++  ++  + +     ++ ee                      ee
     bm04184   360 gepsypevfEPPLTGYPG---EELEE----------------------EE 384  

                   erfsmLGLGDivfPGlLVakaarfdsysqkrsdlnyflacfvAyliGLll
                   er+++LGLGD++f+++LV+kaa+++s     +d+n++lacfvA+liGL+l
     bm04184   385 ERGVKLGLGDFIFYSVLVGKAAATGS-----GDWNTTLACFVAILIGLCL 429  

                   TlvlLavfkkGrAqPALpYlvpftLvfyfltallr<-*
                   Tl+lLavfkk  A+PALp++++f+L+fyf+t++l+   
     bm04184   430 TLLLLAVFKK--ALPALPISITFGLIFYFSTDNLV    462  

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