# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm04279.fasta.nr -Q bm04279.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm04279, 413 aa vs /cdna2/lib/nr/nr library 2779448989 residues in 8089198 sequences statistics sampled from 60000 to 8077471 sequences Expectation_n fit: rho(ln(x))= 5.0791+/-0.000183; mu= 11.2356+/- 0.010 mean_var=70.1506+/-13.485, 0's: 31 Z-trim: 102 B-trim: 16 in 1/68 Lambda= 0.153129 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8089198) gi|3122666|sp|P78406.1|RAE1L_HUMAN RecName: Full=m ( 368) 2574 577.6 1.7e-162 gi|37908080|gb|AAR04856.1| RNA export 1-like prote ( 368) 2569 576.5 3.6e-162 gi|166218412|sp|A5GFN6.1|RAEL1_PIG RecName: Full=m ( 368) 2565 575.6 6.6e-162 gi|73992619|ref|XP_543066.2| PREDICTED: similar to ( 368) 2562 574.9 1e-161 gi|75070022|sp|Q5E9A4.1|RAE1L_BOVIN RecName: Full= ( 368) 2556 573.6 2.6e-161 gi|149734132|ref|XP_001490076.1| PREDICTED: simila ( 368) 2555 573.4 3e-161 gi|81914027|sp|Q8C570.1|RAE1L_MOUSE RecName: Full= ( 368) 2553 572.9 4.1e-161 gi|75076335|sp|Q4R6D2.1|RAE1L_MACFA RecName: Full= ( 368) 2549 572.1 7.6e-161 gi|74222102|dbj|BAE26867.1| unnamed protein produc ( 368) 2548 571.8 8.9e-161 gi|2231592|gb|AAC28127.1| mRNA-associated protein ( 368) 2542 570.5 2.2e-160 gi|114154818|sp|Q3SWS8.1|RAE1L_RAT RecName: Full=m ( 368) 2539 569.8 3.5e-160 gi|126302795|ref|XP_001368922.1| PREDICTED: simila ( 368) 2527 567.2 2.2e-159 gi|149639779|ref|XP_001510132.1| PREDICTED: simila ( 368) 2506 562.6 5.5e-158 gi|224078529|ref|XP_002199237.1| PREDICTED: RAE1 ( ( 368) 2485 557.9 1.4e-156 gi|38570361|gb|AAR24621.1| migration-inducing gene ( 352) 2469 554.4 1.5e-155 gi|82231254|sp|Q5FVA9.1|RAE1L_XENTR RecName: Full= ( 368) 2455 551.3 1.4e-154 gi|166218821|sp|Q7ZWF0.2|RAE1L_DANRE RecName: Full ( 368) 2435 546.9 2.9e-153 gi|126631410|gb|AAI33772.1| LOC100049109 protein [ ( 368) 2435 546.9 2.9e-153 gi|29436458|gb|AAH49445.1| RAE1 RNA export 1 homol ( 368) 2429 545.5 7.3e-153 gi|30039225|gb|AAP12530.1| Rae1/Gle2 [Xenopus laev ( 368) 2404 540.0 3.4e-151 gi|109091514|ref|XP_001087530.1| PREDICTED: RAE1 ( ( 390) 2382 535.2 1e-149 gi|148674670|gb|EDL06617.1| RAE1 RNA export 1 homo ( 358) 2366 531.6 1.1e-148 gi|209733380|gb|ACI67559.1| mRNA export factor [Sa ( 365) 2364 531.2 1.5e-148 gi|26330564|dbj|BAC29012.1| unnamed protein produc ( 341) 2361 530.5 2.3e-148 gi|215496673|gb|EEC06313.1| mRNA export protein, p ( 367) 1957 441.3 1.8e-121 gi|210121722|gb|EEA69433.1| hypothetical protein B ( 340) 1905 429.8 4.8e-118 gi|198420755|ref|XP_002124903.1| PREDICTED: simila ( 361) 1904 429.6 5.9e-118 gi|156550500|ref|XP_001601846.1| PREDICTED: simila ( 403) 1887 425.8 8.7e-117 gi|91087123|ref|XP_975206.1| PREDICTED: similar to ( 359) 1824 411.9 1.2e-112 gi|115691125|ref|XP_001203816.1| PREDICTED: simila ( 372) 1783 402.8 6.7e-110 gi|108877065|gb|EAT41290.1| mitotic checkpoint pro ( 359) 1782 402.6 7.6e-110 gi|157013035|gb|EAA00182.3| AGAP012373-PA [Anophel ( 362) 1770 400.0 4.8e-109 gi|212515690|gb|EEB17788.1| mRNA-associated protei ( 365) 1769 399.7 5.7e-109 gi|156226668|gb|EDO47476.1| predicted protein [Nem ( 335) 1768 399.5 6.2e-109 gi|167876165|gb|EDS39548.1| nucleoporin-17 [Culex ( 361) 1758 397.3 3e-108 gi|48101607|ref|XP_392693.1| PREDICTED: similar to ( 355) 1752 396.0 7.5e-108 gi|193911603|gb|EDW10470.1| GI21110 [Drosophila mo ( 349) 1750 395.5 1e-107 gi|194143872|gb|EDW60268.1| GJ20959 [Drosophila vi ( 349) 1750 395.5 1e-107 gi|193899443|gb|EDV98309.1| GH23041 [Drosophila gr ( 347) 1749 395.3 1.2e-107 gi|54635547|gb|EAL24950.1| GA22080 [Drosophila pse ( 347) 1742 393.8 3.4e-107 gi|27819913|gb|AAM49937.2| LD40776p [Drosophila me ( 360) 1734 392.0 1.2e-106 gi|7291315|gb|AAF46745.1| Rae1 [Drosophila melanog ( 346) 1728 390.7 2.9e-106 gi|190658271|gb|EDV55484.1| GG20758 [Drosophila er ( 346) 1728 390.7 2.9e-106 gi|87248585|gb|ABD36345.1| mRNA export protein [Bo ( 353) 1718 388.5 1.4e-105 gi|190621520|gb|EDV37044.1| GF11632 [Drosophila an ( 336) 1717 388.2 1.5e-105 gi|194158759|gb|EDW73660.1| GK19577 [Drosophila wi ( 348) 1705 385.6 9.8e-105 gi|11071723|emb|CAC14665.1| RAE1 [Chironomus tenta ( 349) 1676 379.2 8.4e-103 gi|224178876|ref|XP_002186587.1| PREDICTED: RAE1 ( ( 243) 1665 376.6 3.4e-102 gi|109091512|ref|XP_001088138.1| PREDICTED: RAE1 ( ( 339) 1503 340.9 2.6e-91 gi|148674669|gb|EDL06616.1| RAE1 RNA export 1 homo ( 254) 1484 336.7 3.8e-90 >>gi|3122666|sp|P78406.1|RAE1L_HUMAN RecName: Full=mRNA (368 aa) initn: 2574 init1: 2574 opt: 2574 Z-score: 3074.0 bits: 577.6 E(): 1.7e-162 Smith-Waterman score: 2574; 100.000% identity (100.000% similar) in 368 aa overlap (46-413:1-368) 20 30 40 50 60 70 bm0427 VLRARAGSQTPQTLLLPAAAFRRGETPRFKMSLFGTTSGFGTSGTSMFGSATTDNHNPMK :::::::::::::::::::::::::::::: gi|312 MSLFGTTSGFGTSGTSMFGSATTDNHNPMK 10 20 30 80 90 100 110 120 130 bm0427 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|312 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL 40 50 60 70 80 90 140 150 160 170 180 190 bm0427 DVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|312 DVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD 100 110 120 130 140 150 200 210 220 230 240 250 bm0427 KTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|312 KTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESP 160 170 180 190 200 210 260 270 280 290 300 310 bm0427 LKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|312 LKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP 220 230 240 250 260 270 320 330 340 350 360 370 bm0427 QDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|312 QDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIF 280 290 300 310 320 330 380 390 400 410 bm0427 AYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNKK :::::::::::::::::::::::::::::::::::::: gi|312 AYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNKK 340 350 360 >>gi|37908080|gb|AAR04856.1| RNA export 1-like protein [ (368 aa) initn: 2569 init1: 2569 opt: 2569 Z-score: 3068.0 bits: 576.5 E(): 3.6e-162 Smith-Waterman score: 2569; 99.728% identity (100.000% similar) in 368 aa overlap (46-413:1-368) 20 30 40 50 60 70 bm0427 VLRARAGSQTPQTLLLPAAAFRRGETPRFKMSLFGTTSGFGTSGTSMFGSATTDNHNPMK :::::::::::::::::::::::::::::: gi|379 MSLFGTTSGFGTSGTSMFGSATTDNHNPMK 10 20 30 80 90 100 110 120 130 bm0427 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL 40 50 60 70 80 90 140 150 160 170 180 190 bm0427 DVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|379 DVCWSDDGSKVFTASCDKTAKMWDLSSNQVIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD 100 110 120 130 140 150 200 210 220 230 240 250 bm0427 KTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 KTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESP 160 170 180 190 200 210 260 270 280 290 300 310 bm0427 LKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 LKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP 220 230 240 250 260 270 320 330 340 350 360 370 bm0427 QDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|379 QDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIF 280 290 300 310 320 330 380 390 400 410 bm0427 AYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNKK :::::::::::::::::::::::::::::::::::::: gi|379 AYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNKK 340 350 360 >>gi|166218412|sp|A5GFN6.1|RAEL1_PIG RecName: Full=mRNA (368 aa) initn: 2565 init1: 2565 opt: 2565 Z-score: 3063.2 bits: 575.6 E(): 6.6e-162 Smith-Waterman score: 2565; 99.457% identity (100.000% similar) in 368 aa overlap (46-413:1-368) 20 30 40 50 60 70 bm0427 VLRARAGSQTPQTLLLPAAAFRRGETPRFKMSLFGTTSGFGTSGTSMFGSATTDNHNPMK ::::::::::::::::::::.::::::::: gi|166 MSLFGTTSGFGTSGTSMFGSTTTDNHNPMK 10 20 30 80 90 100 110 120 130 bm0427 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL 40 50 60 70 80 90 140 150 160 170 180 190 bm0427 DVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|166 DVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD 100 110 120 130 140 150 200 210 220 230 240 250 bm0427 KTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 KTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESP 160 170 180 190 200 210 260 270 280 290 300 310 bm0427 LKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 LKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP 220 230 240 250 260 270 320 330 340 350 360 370 bm0427 QDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 QDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIF 280 290 300 310 320 330 380 390 400 410 bm0427 AYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNKK :::::::::::::::::::::::::::::::::::::: gi|166 AYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNKK 340 350 360 >>gi|73992619|ref|XP_543066.2| PREDICTED: similar to RAE (368 aa) initn: 2562 init1: 2562 opt: 2562 Z-score: 3059.6 bits: 574.9 E(): 1e-161 Smith-Waterman score: 2562; 99.185% identity (100.000% similar) in 368 aa overlap (46-413:1-368) 20 30 40 50 60 70 bm0427 VLRARAGSQTPQTLLLPAAAFRRGETPRFKMSLFGTTSGFGTSGTSMFGSATTDNHNPMK ::::::::::::::::::::..:::::::: gi|739 MSLFGTTSGFGTSGTSMFGSTSTDNHNPMK 10 20 30 80 90 100 110 120 130 bm0427 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL 40 50 60 70 80 90 140 150 160 170 180 190 bm0427 DVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|739 DVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD 100 110 120 130 140 150 200 210 220 230 240 250 bm0427 KTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESP 160 170 180 190 200 210 260 270 280 290 300 310 bm0427 LKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP 220 230 240 250 260 270 320 330 340 350 360 370 bm0427 QDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIF 280 290 300 310 320 330 380 390 400 410 bm0427 AYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNKK :::::::::::::::::::::::::::::::::::::: gi|739 AYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNKK 340 350 360 >>gi|75070022|sp|Q5E9A4.1|RAE1L_BOVIN RecName: Full=mRNA (368 aa) initn: 2556 init1: 2556 opt: 2556 Z-score: 3052.5 bits: 573.6 E(): 2.6e-161 Smith-Waterman score: 2556; 98.641% identity (100.000% similar) in 368 aa overlap (46-413:1-368) 20 30 40 50 60 70 bm0427 VLRARAGSQTPQTLLLPAAAFRRGETPRFKMSLFGTTSGFGTSGTSMFGSATTDNHNPMK :::::::::::..:::::::.::::::::: gi|750 MSLFGTTSGFGSGGTSMFGSTTTDNHNPMK 10 20 30 80 90 100 110 120 130 bm0427 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL 40 50 60 70 80 90 140 150 160 170 180 190 bm0427 DVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD :::::::::::::::::::::::::.::::::::::::::::.::::::::::::::::: gi|750 DVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPVKTVHWIKAPNYSCVMTGSWD 100 110 120 130 140 150 200 210 220 230 240 250 bm0427 KTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 KTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESP 160 170 180 190 200 210 260 270 280 290 300 310 bm0427 LKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 LKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP 220 230 240 250 260 270 320 330 340 350 360 370 bm0427 QDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 QDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIF 280 290 300 310 320 330 380 390 400 410 bm0427 AYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNKK :::::::::::::::::::::::::::::::::::::: gi|750 AYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNKK 340 350 360 >>gi|149734132|ref|XP_001490076.1| PREDICTED: similar to (368 aa) initn: 2555 init1: 2555 opt: 2555 Z-score: 3051.3 bits: 573.4 E(): 3e-161 Smith-Waterman score: 2555; 98.913% identity (100.000% similar) in 368 aa overlap (46-413:1-368) 20 30 40 50 60 70 bm0427 VLRARAGSQTPQTLLLPAAAFRRGETPRFKMSLFGTTSGFGTSGTSMFGSATTDNHNPMK ::::::::::::::::::::.::::::::: gi|149 MSLFGTTSGFGTSGTSMFGSTTTDNHNPMK 10 20 30 80 90 100 110 120 130 bm0427 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL 40 50 60 70 80 90 140 150 160 170 180 190 bm0427 DVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|149 DVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD 100 110 120 130 140 150 200 210 220 230 240 250 bm0427 KTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESP ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|149 KTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLESQPSEFRRIESP 160 170 180 190 200 210 260 270 280 290 300 310 bm0427 LKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP 220 230 240 250 260 270 320 330 340 350 360 370 bm0427 QDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIF ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|149 QDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPIAACCFNHNGNIF 280 290 300 310 320 330 380 390 400 410 bm0427 AYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNKK :::::::::::::::::::::::::::::::::::::: gi|149 AYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNKK 340 350 360 >>gi|81914027|sp|Q8C570.1|RAE1L_MOUSE RecName: Full=mRNA (368 aa) initn: 2553 init1: 2553 opt: 2553 Z-score: 3048.9 bits: 572.9 E(): 4.1e-161 Smith-Waterman score: 2553; 98.641% identity (100.000% similar) in 368 aa overlap (46-413:1-368) 20 30 40 50 60 70 bm0427 VLRARAGSQTPQTLLLPAAAFRRGETPRFKMSLFGTTSGFGTSGTSMFGSATTDNHNPMK :::::.::::::.:::::::.::::::::: gi|819 MSLFGSTSGFGTGGTSMFGSTTTDNHNPMK 10 20 30 80 90 100 110 120 130 bm0427 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL 40 50 60 70 80 90 140 150 160 170 180 190 bm0427 DVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|819 DVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD 100 110 120 130 140 150 200 210 220 230 240 250 bm0427 KTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 KTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESP 160 170 180 190 200 210 260 270 280 290 300 310 bm0427 LKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 LKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP 220 230 240 250 260 270 320 330 340 350 360 370 bm0427 QDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIF ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|819 QDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPIAACCFNHNGNIF 280 290 300 310 320 330 380 390 400 410 bm0427 AYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNKK :::::::::::::::::::::::::::::::::::::: gi|819 AYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNKK 340 350 360 >>gi|75076335|sp|Q4R6D2.1|RAE1L_MACFA RecName: Full=mRNA (368 aa) initn: 2549 init1: 2549 opt: 2549 Z-score: 3044.1 bits: 572.1 E(): 7.6e-161 Smith-Waterman score: 2549; 99.457% identity (99.457% similar) in 368 aa overlap (46-413:1-368) 20 30 40 50 60 70 bm0427 VLRARAGSQTPQTLLLPAAAFRRGETPRFKMSLFGTTSGFGTSGTSMFGSATTDNHNPMK :::::::::::::::::::::::::::::: gi|750 MSLFGTTSGFGTSGTSMFGSATTDNHNPMK 10 20 30 80 90 100 110 120 130 bm0427 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL 40 50 60 70 80 90 140 150 160 170 180 190 bm0427 DVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 DVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD 100 110 120 130 140 150 200 210 220 230 240 250 bm0427 KTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESP :::::::::::::::::::::: ::::::::::::::: ::::::::::::::::::::: gi|750 KTLKFWDTRSSNPMMVLQLPERYYCADVIYPMAVVATAGRGLIVYQLENQPSEFRRIESP 160 170 180 190 200 210 260 270 280 290 300 310 bm0427 LKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 LKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP 220 230 240 250 260 270 320 330 340 350 360 370 bm0427 QDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 QDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIF 280 290 300 310 320 330 380 390 400 410 bm0427 AYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNKK :::::::::::::::::::::::::::::::::::::: gi|750 AYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNKK 340 350 360 >>gi|74222102|dbj|BAE26867.1| unnamed protein product [M (368 aa) initn: 2548 init1: 2548 opt: 2548 Z-score: 3042.9 bits: 571.8 E(): 8.9e-161 Smith-Waterman score: 2548; 98.370% identity (100.000% similar) in 368 aa overlap (46-413:1-368) 20 30 40 50 60 70 bm0427 VLRARAGSQTPQTLLLPAAAFRRGETPRFKMSLFGTTSGFGTSGTSMFGSATTDNHNPMK :::::.::::::.:::::::.::::::::: gi|742 MSLFGSTSGFGTGGTSMFGSTTTDNHNPMK 10 20 30 80 90 100 110 120 130 bm0427 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL 40 50 60 70 80 90 140 150 160 170 180 190 bm0427 DVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|742 DVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD 100 110 120 130 140 150 200 210 220 230 240 250 bm0427 KTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 KTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESP 160 170 180 190 200 210 260 270 280 290 300 310 bm0427 LKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|742 LKHQHRCVAIFKDKQNKPTGFTLGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP 220 230 240 250 260 270 320 330 340 350 360 370 bm0427 QDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIF ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|742 QDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPIAACCFNHNGNIF 280 290 300 310 320 330 380 390 400 410 bm0427 AYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNKK :::::::::::::::::::::::::::::::::::::: gi|742 AYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNKK 340 350 360 >>gi|2231592|gb|AAC28127.1| mRNA-associated protein mrnp (368 aa) initn: 2542 init1: 2542 opt: 2542 Z-score: 3035.8 bits: 570.5 E(): 2.2e-160 Smith-Waterman score: 2542; 98.913% identity (99.457% similar) in 368 aa overlap (46-413:1-368) 20 30 40 50 60 70 bm0427 VLRARAGSQTPQTLLLPAAAFRRGETPRFKMSLFGTTSGFGTSGTSMFGSATTDNHNPMK :::::::::.:::::::::::::::::::: gi|223 MSLFGTTSGLGTSGTSMFGSATTDNHNPMK 10 20 30 80 90 100 110 120 130 bm0427 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL :::::::::::::::::::::::: :::::::::::::::::::::::::::::::::: gi|223 GIEVTSSPDDSIGCLSFSPPTLPGNSLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL 40 50 60 70 80 90 140 150 160 170 180 190 bm0427 DVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|223 DVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD 100 110 120 130 140 150 200 210 220 230 240 250 bm0427 KTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESP :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|223 KTLKFWDNRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESP 160 170 180 190 200 210 260 270 280 290 300 310 bm0427 LKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|223 LKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP 220 230 240 250 260 270 320 330 340 350 360 370 bm0427 QDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|223 QDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIF 280 290 300 310 320 330 380 390 400 410 bm0427 AYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNKK :::::::::::::::::::::::::::::::::::::: gi|223 AYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNKK 340 350 360 413 residues in 1 query sequences 2779448989 residues in 8089198 library sequences Tcomplib [34.26] (8 proc) start: Thu Apr 16 11:36:38 2009 done: Thu Apr 16 11:39:31 2009 Total Scan time: 966.130 Total Display time: 0.090 Function used was FASTA [version 34.26.5 April 26, 2007]