# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm04280.fasta.nr -Q bm04280.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm04280, 464 aa vs /cdna2/lib/nr/nr library 3020366983 residues in 8842601 sequences statistics sampled from 60000 to 8834984 sequences Expectation_n fit: rho(ln(x))= 6.4282+/-0.000196; mu= 6.2898+/- 0.011 mean_var=109.6867+/-21.344, 0's: 32 Z-trim: 48 B-trim: 420 in 1/65 Lambda= 0.122461 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8842601) gi|114556054|ref|XP_513355.2| PREDICTED: stromal m ( 607) 3058 550.8 3.8e-154 gi|109002628|ref|XP_001083189.1| PREDICTED: simila ( 660) 3035 546.8 6.9e-153 gi|74760545|sp|Q8WU79.1|SMAP2_HUMAN RecName: Full= ( 429) 2926 527.4 3.1e-147 gi|183223973|dbj|BAG24503.1| stromal membrane-asso ( 429) 2819 508.5 1.5e-141 gi|81894445|sp|Q7TN29.1|SMAP2_MOUSE RecName: Full= ( 428) 2806 506.2 7.4e-141 gi|6807591|emb|CAB70912.1| hypothetical protein [H ( 409) 2804 505.8 9.1e-141 gi|171847070|gb|AAI61927.1| Smap2 protein [Rattus ( 428) 2799 504.9 1.7e-140 gi|75057873|sp|Q5EA00.1|SMAP2_BOVIN RecName: Full= ( 429) 2789 503.2 5.9e-140 gi|149023856|gb|EDL80353.1| stromal membrane-assoc ( 426) 2768 499.5 7.7e-139 gi|148698464|gb|EDL30411.1| stromal membrane-assoc ( 417) 2720 491.0 2.7e-136 gi|6468309|emb|CAB61580.1| hypothetical protein [H ( 399) 2707 488.7 1.3e-135 gi|73976845|ref|XP_539575.2| PREDICTED: similar to ( 405) 2624 474.0 3.4e-131 gi|194207631|ref|XP_001498118.2| PREDICTED: simila ( 424) 2624 474.0 3.5e-131 gi|126330217|ref|XP_001365672.1| PREDICTED: simila ( 430) 2570 464.5 2.6e-128 gi|149638420|ref|XP_001507351.1| PREDICTED: simila ( 431) 2476 447.9 2.6e-123 gi|149638422|ref|XP_001507392.1| PREDICTED: simila ( 432) 2464 445.8 1.1e-122 gi|221042348|dbj|BAH12851.1| unnamed protein produ ( 349) 2360 427.3 3.3e-117 gi|15680294|gb|AAH14512.1| SMAP2 protein [Homo sap ( 347) 2346 424.9 1.8e-116 gi|82125421|sp|Q5F413.1|SMAP2_CHICK RecName: Full= ( 428) 2343 424.4 3.1e-116 gi|66912074|gb|AAH97800.1| LOC733260 protein [Xeno ( 425) 1991 362.2 1.6e-97 gi|49257975|gb|AAH74142.1| MGC81879 protein [Xenop ( 421) 1978 359.9 7.9e-97 gi|119930888|ref|XP_001256693.1| PREDICTED: simila ( 266) 1684 307.8 2.4e-81 gi|221040164|dbj|BAH11845.1| unnamed protein produ ( 245) 1652 302.1 1.1e-79 gi|56202962|emb|CAI19853.1| small ArfGAP2 [Homo sa ( 227) 1542 282.7 7.5e-74 gi|74220510|dbj|BAE31472.1| unnamed protein produc ( 245) 1470 270.0 5.4e-70 gi|81879524|sp|Q91VZ6.1|SMAP1_MOUSE RecName: Full= ( 440) 1306 241.2 4.5e-61 gi|189054968|dbj|BAG37952.1| unnamed protein produ ( 440) 1299 239.9 1.1e-60 gi|33150884|gb|AAP97320.1|AF442495_1 putative prot ( 440) 1296 239.4 1.5e-60 gi|109486883|ref|XP_001071989.1| PREDICTED: simila ( 688) 1298 239.9 1.7e-60 gi|62896981|dbj|BAD96431.1| stromal membrane-assoc ( 440) 1291 238.5 2.8e-60 gi|55958381|emb|CAI12310.1| small ArfGAP 1 [Homo s ( 436) 1185 219.8 1.2e-54 gi|119569194|gb|EAW48809.1| stromal membrane-assoc ( 436) 1185 219.8 1.2e-54 gi|10435055|dbj|BAB14473.1| unnamed protein produc ( 437) 1185 219.8 1.2e-54 gi|94732576|emb|CAK04279.1| novel protein similar ( 418) 1173 217.7 5.1e-54 gi|71051846|gb|AAH99210.1| Smap2 protein [Rattus n ( 173) 1139 211.4 1.6e-52 gi|119220864|gb|ABL61516.1| SMAP1 protein [Canis l ( 446) 1127 209.6 1.5e-51 gi|126310214|ref|XP_001365465.1| PREDICTED: simila ( 449) 1107 206.0 1.8e-50 gi|224082176|ref|XP_002186659.1| PREDICTED: simila ( 315) 1033 192.8 1.1e-46 gi|50417734|gb|AAH77937.1| MGC80897 protein [Xenop ( 350) 1014 189.5 1.3e-45 gi|77748103|gb|AAI06206.1| Unknown (protein for MG ( 393) 984 184.3 5.5e-44 gi|115528156|gb|AAI24756.1| Stromal membrane-assoc ( 459) 931 174.9 4.1e-41 gi|118138501|pdb|2IQJ|A Chain A, Crystal Structure ( 134) 917 172.1 8.6e-41 gi|148682456|gb|EDL14403.1| stromal membrane-assoc ( 260) 862 162.6 1.2e-37 gi|148682457|gb|EDL14404.1| stromal membrane-assoc ( 355) 858 162.0 2.5e-37 gi|149069181|gb|EDM18622.1| rCG43639, isoform CRA_ ( 355) 837 158.3 3.3e-36 gi|74202993|dbj|BAE26202.1| unnamed protein produc ( 118) 827 156.2 4.8e-36 gi|170285218|gb|AAI61085.1| LOC100145457 protein [ ( 471) 834 157.8 6e-36 gi|126310212|ref|XP_001365400.1| PREDICTED: simila ( 474) 778 147.9 5.7e-33 gi|23273590|gb|AAH36123.1| Small ArfGAP 1 [Homo sa ( 467) 761 144.9 4.6e-32 gi|158261919|dbj|BAF83137.1| unnamed protein produ ( 467) 760 144.7 5.2e-32 >>gi|114556054|ref|XP_513355.2| PREDICTED: stromal membr (607 aa) initn: 2893 init1: 1796 opt: 3058 Z-score: 2924.5 bits: 550.8 E(): 3.8e-154 Smith-Waterman score: 3058; 97.414% identity (98.491% similar) in 464 aa overlap (1-464:148-607) 10 20 30 bm0428 GAPGRGTGSPQPRTEAGVSGGEEGASPSAP ::::::::::.::::::::::::::::::: gi|114 AEGLRSGGRTPPTREGASGGAGGEGSPRSGGAPGRGTGSPHPRTEAGVSGGEEGASPSAP 120 130 140 150 160 170 40 50 60 70 80 90 bm0428 AGTLAMTGKSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AGTLAMTGKSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIH 180 190 200 210 220 230 100 110 120 130 140 150 bm0428 RNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIR 240 250 260 270 280 290 160 170 180 190 200 210 bm0428 DKYEKKKYMDRSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPRK ::::::::::: .... :::::::::::::::::::::::::: :::::::::::: gi|114 DKYEKKKYMDR-ISFSLTNKEKDDKWKRGSEPVPEKKLEPVVFEK---PQKKEDPQLPRK 300 310 320 330 340 350 220 230 240 250 260 270 bm0428 SSPKSTAPVMDLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVGSMPTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SSPKSTAPVMDLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVGSMPTA 360 370 380 390 400 410 280 290 300 310 320 330 bm0428 GSAGSVPENLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQMAYPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GSAGSVPENLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQMAYPT 420 430 440 450 460 470 340 350 360 370 380 390 bm0428 AYPSFPGVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGVPNGMM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AYPSFPGVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGVPNGMM 480 490 500 510 520 530 400 410 420 430 440 450 bm0428 TTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQSMSGGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQSMSGGN 540 550 560 570 580 590 460 bm0428 GQAANQTLSPQMWK :::::::::::::: gi|114 GQAANQTLSPQMWK 600 >>gi|109002628|ref|XP_001083189.1| PREDICTED: similar to (660 aa) initn: 2870 init1: 1781 opt: 3035 Z-score: 2902.0 bits: 546.8 E(): 6.9e-153 Smith-Waterman score: 3035; 96.760% identity (98.488% similar) in 463 aa overlap (2-464:202-660) 10 20 30 bm0428 GAPGRGTGSPQPRTEAGVSGGEEGASPSAPA :::::::::.:::::::::::::::::::: gi|109 EGLRSGGRTPPTREGASGGARGEGSPRSGFAPGRGTGSPHPRTEAGVSGGEEGASPSAPA 180 190 200 210 220 230 40 50 60 70 80 90 bm0428 GTLAMTGKSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GTLAMTGKSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHR 240 250 260 270 280 290 100 110 120 130 140 150 bm0428 NLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRD 300 310 320 330 340 350 160 170 180 190 200 210 bm0428 KYEKKKYMDRSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDPQLPRKS :::::::::: .... :::::::::::::::::::::::::: ::::::::::::: gi|109 KYEKKKYMDR-ISFSLTNKEKDDKWKRGSEPVPEKKLEPVVFEK---PQKKEDPQLPRKS 360 370 380 390 400 220 230 240 250 260 270 bm0428 SPKSTAPVMDLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVGSMPTAG ::::::::::::::::::.::::::::.:::::::::::::::::::::::::::::::: gi|109 SPKSTAPVMDLLGLDAPVSCSIANSKTGNTLEKDLDLLASVPSPSSSGSRKVVGSMPTAG 410 420 430 440 450 460 280 290 300 310 320 330 bm0428 SAGSVPENLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQMAYPTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SAGSVPENLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQMAYPTA 470 480 490 500 510 520 340 350 360 370 380 390 bm0428 YPSFPGVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGVPNGMMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 YPSFPGVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGVPNGMMT 530 540 550 560 570 580 400 410 420 430 440 450 bm0428 TQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQSMSGGNG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|109 TQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQSMSGGSG 590 600 610 620 630 640 460 bm0428 QAANQTLSPQMWK ::::::::::::: gi|109 QAANQTLSPQMWK 650 660 >>gi|74760545|sp|Q8WU79.1|SMAP2_HUMAN RecName: Full=Stro (429 aa) initn: 2926 init1: 2926 opt: 2926 Z-score: 2800.6 bits: 527.4 E(): 3.1e-147 Smith-Waterman score: 2926; 100.000% identity (100.000% similar) in 429 aa overlap (36-464:1-429) 10 20 30 40 50 60 bm0428 GTGSPQPRTEAGVSGGEEGASPSAPAGTLAMTGKSVKDVDRYQAVLANLLLEEDNKFCAD :::::::::::::::::::::::::::::: gi|747 MTGKSVKDVDRYQAVLANLLLEEDNKFCAD 10 20 30 70 80 90 100 110 120 bm0428 CQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 CQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKAN 40 50 60 70 80 90 130 140 150 160 170 180 bm0428 RLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKYMDRSLDINAFRKEKDDKWKRGSEPVPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 RLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKYMDRSLDINAFRKEKDDKWKRGSEPVPE 100 110 120 130 140 150 190 200 210 220 230 240 bm0428 KKLEPVVFEKVKMPQKKEDPQLPRKSSPKSTAPVMDLLGLDAPVACSIANSKTSNTLEKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 KKLEPVVFEKVKMPQKKEDPQLPRKSSPKSTAPVMDLLGLDAPVACSIANSKTSNTLEKD 160 170 180 190 200 210 250 260 270 280 290 300 bm0428 LDLLASVPSPSSSGSRKVVGSMPTAGSAGSVPENLNLFPEPGSKSEEIGKKQLSKDSILS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 LDLLASVPSPSSSGSRKVVGSMPTAGSAGSVPENLNLFPEPGSKSEEIGKKQLSKDSILS 220 230 240 250 260 270 310 320 330 340 350 360 bm0428 LYGSQTPQMPTQAMFMAPAQMAYPTAYPSFPGVTPPNSIMGSMMPPPVGMVAQPGASGMV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 LYGSQTPQMPTQAMFMAPAQMAYPTAYPSFPGVTPPNSIMGSMMPPPVGMVAQPGASGMV 280 290 300 310 320 330 370 380 390 400 410 420 bm0428 APMAMPAGYMGGMQASMMGVPNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 APMAMPAGYMGGMQASMMGVPNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMT 340 350 360 370 380 390 430 440 450 460 bm0428 QQMAGMNFYGANGMMNYGQSMSGGNGQAANQTLSPQMWK ::::::::::::::::::::::::::::::::::::::: gi|747 QQMAGMNFYGANGMMNYGQSMSGGNGQAANQTLSPQMWK 400 410 420 >>gi|183223973|dbj|BAG24503.1| stromal membrane-associat (429 aa) initn: 2819 init1: 2819 opt: 2819 Z-score: 2698.4 bits: 508.5 E(): 1.5e-141 Smith-Waterman score: 2819; 95.804% identity (98.834% similar) in 429 aa overlap (36-464:1-429) 10 20 30 40 50 60 bm0428 GTGSPQPRTEAGVSGGEEGASPSAPAGTLAMTGKSVKDVDRYQAVLANLLLEEDNKFCAD :::::::::::::::::::::::::::::: gi|183 MTGKSVKDVDRYQAVLANLLLEEDNKFCAD 10 20 30 70 80 90 100 110 120 bm0428 CQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|183 CQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKAN 40 50 60 70 80 90 130 140 150 160 170 180 bm0428 RLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKYMDRSLDINAFRKEKDDKWKRGSEPVPE ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::.:: gi|183 RLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKYMDRSLDINALRKEKDDKWKRGSEPAPE 100 110 120 130 140 150 190 200 210 220 230 240 bm0428 KKLEPVVFEKVKMPQKKEDPQLPRKSSPKSTAPVMDLLGLDAPVACSIANSKTSNTLEKD ::.:::::::::::::::::::::::::::::::::::::::::.:: ::.::::::::: gi|183 KKMEPVVFEKVKMPQKKEDPQLPRKSSPKSTAPVMDLLGLDAPVSCSTANNKTSNTLEKD 160 170 180 190 200 210 250 260 270 280 290 300 bm0428 LDLLASVPSPSSSGSRKVVGSMPTAGSAGSVPENLNLFPEPGSKSEEIGKKQLSKDSILS ::::::::::::: ::::::::::::::::::::::::::::::::: :::::::::::: gi|183 LDLLASVPSPSSSVSRKVVGSMPTAGSAGSVPENLNLFPEPGSKSEETGKKQLSKDSILS 220 230 240 250 260 270 310 320 330 340 350 360 bm0428 LYGSQTPQMPTQAMFMAPAQMAYPTAYPSFPGVTPPNSIMGSMMPPPVGMVAQPGASGMV ::::::::::.::.:::::::::::::::::::: ::::::.:::::::::::::::::: gi|183 LYGSQTPQMPAQAVFMAPAQMAYPTAYPSFPGVTTPNSIMGGMMPPPVGMVAQPGASGMV 280 290 300 310 320 330 370 380 390 400 410 420 bm0428 APMAMPAGYMGGMQASMMGVPNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMT ::::::::::::::::::::::::::::::::::::::.:::::::::.::::::::::: gi|183 APMAMPAGYMGGMQASMMGVPNGMMTTQQAGYMAGMAALPQTVYGVQPVQQLQWNLTQMT 340 350 360 370 380 390 430 440 450 460 bm0428 QQMAGMNFYGANGMMNYGQSMSGGNGQAANQTLSPQMWK :::::::: :::::..:::::.::::::::::::::::: gi|183 QQMAGMNFCGANGMLSYGQSMNGGNGQAANQTLSPQMWK 400 410 420 >>gi|81894445|sp|Q7TN29.1|SMAP2_MOUSE RecName: Full=Stro (428 aa) initn: 1545 init1: 1471 opt: 2806 Z-score: 2686.0 bits: 506.2 E(): 7.4e-141 Smith-Waterman score: 2806; 95.571% identity (99.068% similar) in 429 aa overlap (36-464:1-428) 10 20 30 40 50 60 bm0428 GTGSPQPRTEAGVSGGEEGASPSAPAGTLAMTGKSVKDVDRYQAVLANLLLEEDNKFCAD :::::::::::::::::::::::::::::: gi|818 MTGKSVKDVDRYQAVLANLLLEEDNKFCAD 10 20 30 70 80 90 100 110 120 bm0428 CQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 CQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKAN 40 50 60 70 80 90 130 140 150 160 170 180 bm0428 RLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKYMDRSLDINAFRKEKDDKWKRGSEPVPE :::::::::::::::::::::::::::::::::::::::::..:::::::::::.::.:: gi|818 RLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKYMDRSLDINVLRKEKDDKWKRGNEPAPE 100 110 120 130 140 150 190 200 210 220 230 240 bm0428 KKLEPVVFEKVKMPQKKEDPQLPRKSSPKSTAPVMDLLGLDAPVACSIANSKTSNTLEKD ::.:::::::::::::::: ::::::::::.::::::::::::::::::::::::.:::: gi|818 KKMEPVVFEKVKMPQKKEDAQLPRKSSPKSAAPVMDLLGLDAPVACSIANSKTSNALEKD 160 170 180 190 200 210 250 260 270 280 290 300 bm0428 LDLLASVPSPSSSGSRKVVGSMPTAGSAGSVPENLNLFPEPGSKSEEIGKKQLSKDSILS :::::::::::: :::.::::::::::::::::::::::::::::: :::::::::::: gi|818 LDLLASVPSPSSV-SRKAVGSMPTAGSAGSVPENLNLFPEPGSKSEETGKKQLSKDSILS 220 230 240 250 260 310 320 330 340 350 360 bm0428 LYGSQTPQMPTQAMFMAPAQMAYPTAYPSFPGVTPPNSIMGSMMPPPVGMVAQPGASGMV ::::::::::.::::::::::::::::::::::::::::::.:.:::::::::::::::. gi|818 LYGSQTPQMPAQAMFMAPAQMAYPTAYPSFPGVTPPNSIMGGMVPPPVGMVAQPGASGML 270 280 290 300 310 320 370 380 390 400 410 420 bm0428 APMAMPAGYMGGMQASMMGVPNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMT .:::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|818 TPMAMPAGYMGGMQASMMGVPNGMMTTQQAGYMASMAAMPQTVYGVQPAQQLQWNLTQMT 330 340 350 360 370 380 430 440 450 460 bm0428 QQMAGMNFYGANGMMNYGQSMSGGNGQAANQTLSPQMWK :::::::::::::::::::::.::::::::::::::::: gi|818 QQMAGMNFYGANGMMNYGQSMGGGNGQAANQTLSPQMWK 390 400 410 420 >>gi|6807591|emb|CAB70912.1| hypothetical protein [Homo (409 aa) initn: 2804 init1: 2804 opt: 2804 Z-score: 2684.4 bits: 505.8 E(): 9.1e-141 Smith-Waterman score: 2804; 100.000% identity (100.000% similar) in 409 aa overlap (56-464:1-409) 30 40 50 60 70 80 bm0428 SPSAPAGTLAMTGKSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIR :::::::::::::::::::::::::::::: gi|680 LEEDNKFCADCQSKGPRWASWNIGVFICIR 10 20 30 90 100 110 120 130 140 bm0428 CAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 CAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAV 40 50 60 70 80 90 150 160 170 180 190 200 bm0428 EGFIRDKYEKKKYMDRSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 EGFIRDKYEKKKYMDRSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFEKVKMPQKKEDP 100 110 120 130 140 150 210 220 230 240 250 260 bm0428 QLPRKSSPKSTAPVMDLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 QLPRKSSPKSTAPVMDLLGLDAPVACSIANSKTSNTLEKDLDLLASVPSPSSSGSRKVVG 160 170 180 190 200 210 270 280 290 300 310 320 bm0428 SMPTAGSAGSVPENLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 SMPTAGSAGSVPENLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQMPTQAMFMAPAQ 220 230 240 250 260 270 330 340 350 360 370 380 bm0428 MAYPTAYPSFPGVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 MAYPTAYPSFPGVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGYMGGMQASMMGV 280 290 300 310 320 330 390 400 410 420 430 440 bm0428 PNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 PNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANGMMNYGQS 340 350 360 370 380 390 450 460 bm0428 MSGGNGQAANQTLSPQMWK ::::::::::::::::::: gi|680 MSGGNGQAANQTLSPQMWK 400 >>gi|171847070|gb|AAI61927.1| Smap2 protein [Rattus norv (428 aa) initn: 1542 init1: 1475 opt: 2799 Z-score: 2679.4 bits: 504.9 E(): 1.7e-140 Smith-Waterman score: 2799; 95.571% identity (98.834% similar) in 429 aa overlap (36-464:1-428) 10 20 30 40 50 60 bm0428 GTGSPQPRTEAGVSGGEEGASPSAPAGTLAMTGKSVKDVDRYQAVLANLLLEEDNKFCAD :::::::::::::::::::::::::::::: gi|171 MTGKSVKDVDRYQAVLANLLLEEDNKFCAD 10 20 30 70 80 90 100 110 120 bm0428 CQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|171 CQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKAN 40 50 60 70 80 90 130 140 150 160 170 180 bm0428 RLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKYMDRSLDINAFRKEKDDKWKRGSEPVPE :::::::::::::::::::::::::::::::::::::::::..::::::::::::::.:: gi|171 RLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKYMDRSLDINVLRKEKDDKWKRGSEPAPE 100 110 120 130 140 150 190 200 210 220 230 240 bm0428 KKLEPVVFEKVKMPQKKEDPQLPRKSSPKSTAPVMDLLGLDAPVACSIANSKTSNTLEKD ::.:::::::::::::::: ::::::::::.::::::::::::::::::::::::.:::: gi|171 KKMEPVVFEKVKMPQKKEDAQLPRKSSPKSAAPVMDLLGLDAPVACSIANSKTSNALEKD 160 170 180 190 200 210 250 260 270 280 290 300 bm0428 LDLLASVPSPSSSGSRKVVGSMPTAGSAGSVPENLNLFPEPGSKSEEIGKKQLSKDSILS :::::::::::: :::.::::::::::::::::::::::::::::: :::::::::::: gi|171 LDLLASVPSPSSV-SRKAVGSMPTAGSAGSVPENLNLFPEPGSKSEETGKKQLSKDSILS 220 230 240 250 260 310 320 330 340 350 360 bm0428 LYGSQTPQMPTQAMFMAPAQMAYPTAYPSFPGVTPPNSIMGSMMPPPVGMVAQPGASGMV ::::::::::.:::::::::::::::::::::::::::::::::::::::::.::::::: gi|171 LYGSQTPQMPAQAMFMAPAQMAYPTAYPSFPGVTPPNSIMGSMMPPPVGMVAHPGASGMV 270 280 290 300 310 320 370 380 390 400 410 420 bm0428 APMAMPAGYMGGMQASMMGVPNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMT .:::::::::::::::: :::.::::::::::::.::::::::::::::::::::::::: gi|171 TPMAMPAGYMGGMQASMAGVPSGMMTTQQAGYMASMAAMPQTVYGVQPAQQLQWNLTQMT 330 340 350 360 370 380 430 440 450 460 bm0428 QQMAGMNFYGANGMMNYGQSMSGGNGQAANQTLSPQMWK :::::::::::::::.:::::.::::::::::::::::: gi|171 QQMAGMNFYGANGMMSYGQSMGGGNGQAANQTLSPQMWK 390 400 410 420 >>gi|75057873|sp|Q5EA00.1|SMAP2_BOVIN RecName: Full=Stro (429 aa) initn: 2789 init1: 2789 opt: 2789 Z-score: 2669.8 bits: 503.2 E(): 5.9e-140 Smith-Waterman score: 2789; 94.872% identity (98.368% similar) in 429 aa overlap (36-464:1-429) 10 20 30 40 50 60 bm0428 GTGSPQPRTEAGVSGGEEGASPSAPAGTLAMTGKSVKDVDRYQAVLANLLLEEDNKFCAD :::::::::::::::::::::::::::::: gi|750 MTGKSVKDVDRYQAVLANLLLEEDNKFCAD 10 20 30 70 80 90 100 110 120 bm0428 CQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 CQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKAN 40 50 60 70 80 90 130 140 150 160 170 180 bm0428 RLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKYMDRSLDINAFRKEKDDKWKRGSEPVPE ::::::::::::::::: ::::::::::::::::::::::::::::::.::::::::.:: gi|750 RLYEAYLPETFRRPQIDHAVEGFIRDKYEKKKYMDRSLDINAFRKEKDNKWKRGSEPAPE 100 110 120 130 140 150 190 200 210 220 230 240 bm0428 KKLEPVVFEKVKMPQKKEDPQLPRKSSPKSTAPVMDLLGLDAPVACSIANSKTSNTLEKD ::.::::::::::::::::::::::.:::: :::.:::::::::.:::::.::::::::: gi|750 KKMEPVVFEKVKMPQKKEDPQLPRKTSPKSKAPVVDLLGLDAPVSCSIANGKTSNTLEKD 160 170 180 190 200 210 250 260 270 280 290 300 bm0428 LDLLASVPSPSSSGSRKVVGSMPTAGSAGSVPENLNLFPEPGSKSEEIGKKQLSKDSILS ::::::: ::::: :::::::::: :::::::::::::::::::::: .::::::::::: gi|750 LDLLASVSSPSSSVSRKVVGSMPTPGSAGSVPENLNLFPEPGSKSEETSKKQLSKDSILS 220 230 240 250 260 270 310 320 330 340 350 360 bm0428 LYGSQTPQMPTQAMFMAPAQMAYPTAYPSFPGVTPPNSIMGSMMPPPVGMVAQPGASGMV ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|750 LYGSQTPQMPTQAMFMAPAQMAYPTAYPSFPGVTPPNSLMGSMMPPPVGMVAQPGASGMV 280 290 300 310 320 330 370 380 390 400 410 420 bm0428 APMAMPAGYMGGMQASMMGVPNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMT ::::::::::::::::::::::::::::::.:::::::::::.::::::::::::::::: gi|750 APMAMPAGYMGGMQASMMGVPNGMMTTQQASYMAGMAAMPQTMYGVQPAQQLQWNLTQMT 340 350 360 370 380 390 430 440 450 460 bm0428 QQMAGMNFYGANGMMNYGQSMSGGNGQAANQTLSPQMWK :::::::: :.:::..:::::.::::::::::::::::: gi|750 QQMAGMNFCGTNGMLSYGQSMNGGNGQAANQTLSPQMWK 400 410 420 >>gi|149023856|gb|EDL80353.1| stromal membrane-associate (426 aa) initn: 2447 init1: 1348 opt: 2768 Z-score: 2649.8 bits: 499.5 E(): 7.7e-139 Smith-Waterman score: 2768; 95.105% identity (98.368% similar) in 429 aa overlap (36-464:1-426) 10 20 30 40 50 60 bm0428 GTGSPQPRTEAGVSGGEEGASPSAPAGTLAMTGKSVKDVDRYQAVLANLLLEEDNKFCAD :::::::::::::::::::::::::::::: gi|149 MTGKSVKDVDRYQAVLANLLLEEDNKFCAD 10 20 30 70 80 90 100 110 120 bm0428 CQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 CQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKAN 40 50 60 70 80 90 130 140 150 160 170 180 bm0428 RLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKYMDRSLDINAFRKEKDDKWKRGSEPVPE :::::::::::::::::::::::::::::::::::::::::..::::::::::::::.:: gi|149 RLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKYMDRSLDINVLRKEKDDKWKRGSEPAPE 100 110 120 130 140 150 190 200 210 220 230 240 bm0428 KKLEPVVFEKVKMPQKKEDPQLPRKSSPKSTAPVMDLLGLDAPVACSIANSKTSNTLEKD ::.:::::::::: :::: ::::::::::.::::::::::::::::::::::::.:::: gi|149 KKMEPVVFEKVKM--KKEDAQLPRKSSPKSAAPVMDLLGLDAPVACSIANSKTSNALEKD 160 170 180 190 200 250 260 270 280 290 300 bm0428 LDLLASVPSPSSSGSRKVVGSMPTAGSAGSVPENLNLFPEPGSKSEEIGKKQLSKDSILS :::::::::::: :::.::::::::::::::::::::::::::::: :::::::::::: gi|149 LDLLASVPSPSSV-SRKAVGSMPTAGSAGSVPENLNLFPEPGSKSEETGKKQLSKDSILS 210 220 230 240 250 260 310 320 330 340 350 360 bm0428 LYGSQTPQMPTQAMFMAPAQMAYPTAYPSFPGVTPPNSIMGSMMPPPVGMVAQPGASGMV ::::::::::.:::::::::::::::::::::::::::::::::::::::::.::::::: gi|149 LYGSQTPQMPAQAMFMAPAQMAYPTAYPSFPGVTPPNSIMGSMMPPPVGMVAHPGASGMV 270 280 290 300 310 320 370 380 390 400 410 420 bm0428 APMAMPAGYMGGMQASMMGVPNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMT .:::::::::::::::: :::.::::::::::::.::::::::::::::::::::::::: gi|149 TPMAMPAGYMGGMQASMAGVPSGMMTTQQAGYMASMAAMPQTVYGVQPAQQLQWNLTQMT 330 340 350 360 370 380 430 440 450 460 bm0428 QQMAGMNFYGANGMMNYGQSMSGGNGQAANQTLSPQMWK :::::::::::::::.:::::.::::::::::::::::: gi|149 QQMAGMNFYGANGMMSYGQSMGGGNGQAANQTLSPQMWK 390 400 410 420 >>gi|148698464|gb|EDL30411.1| stromal membrane-associate (417 aa) initn: 2399 init1: 1359 opt: 2720 Z-score: 2604.1 bits: 491.0 E(): 2.7e-136 Smith-Waterman score: 2720; 95.000% identity (98.571% similar) in 420 aa overlap (45-464:1-417) 20 30 40 50 60 70 bm0428 EAGVSGGEEGASPSAPAGTLAMTGKSVKDVDRYQAVLANLLLEEDNKFCADCQSKGPRWA :::::::::::::::::::::::::::::: gi|148 DRYQAVLANLLLEEDNKFCADCQSKGPRWA 10 20 30 80 90 100 110 120 130 bm0428 SWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPE 40 50 60 70 80 90 140 150 160 170 180 190 bm0428 TFRRPQIDPAVEGFIRDKYEKKKYMDRSLDINAFRKEKDDKWKRGSEPVPEKKLEPVVFE ::::::::::::::::::::::::::::::::..:::::::::::.::.::::.:::::: gi|148 TFRRPQIDPAVEGFIRDKYEKKKYMDRSLDINVLRKEKDDKWKRGNEPAPEKKMEPVVFE 100 110 120 130 140 150 200 210 220 230 240 250 bm0428 KVKMPQKKEDPQLPRKSSPKSTAPVMDLLGLDAPVACSIANSKTSNTLEKDLDLLASVPS :::: :::: ::::::::::.::::::::::::::::::::::::.::::::::::::: gi|148 KVKM--KKEDAQLPRKSSPKSAAPVMDLLGLDAPVACSIANSKTSNALEKDLDLLASVPS 160 170 180 190 200 260 270 280 290 300 310 bm0428 PSSSGSRKVVGSMPTAGSAGSVPENLNLFPEPGSKSEEIGKKQLSKDSILSLYGSQTPQM ::: :::.::::::::::::::::::::::::::::: ::::::::::::::::::::: gi|148 PSSV-SRKAVGSMPTAGSAGSVPENLNLFPEPGSKSEETGKKQLSKDSILSLYGSQTPQM 210 220 230 240 250 260 320 330 340 350 360 370 bm0428 PTQAMFMAPAQMAYPTAYPSFPGVTPPNSIMGSMMPPPVGMVAQPGASGMVAPMAMPAGY :.::::::::::::::::::::::::::::::.:.:::::::::::::::..:::::::: gi|148 PAQAMFMAPAQMAYPTAYPSFPGVTPPNSIMGGMVPPPVGMVAQPGASGMLTPMAMPAGY 270 280 290 300 310 320 380 390 400 410 420 430 bm0428 MGGMQASMMGVPNGMMTTQQAGYMAGMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFY :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|148 MGGMQASMMGVPNGMMTTQQAGYMASMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFY 330 340 350 360 370 380 440 450 460 bm0428 GANGMMNYGQSMSGGNGQAANQTLSPQMWK ::::::::::::.::::::::::::::::: gi|148 GANGMMNYGQSMGGGNGQAANQTLSPQMWK 390 400 410 464 residues in 1 query sequences 3020366983 residues in 8842601 library sequences Tcomplib [34.26] (8 proc) start: Mon May 25 11:38:16 2009 done: Mon May 25 11:41:20 2009 Total Scan time: 1103.000 Total Display time: 0.130 Function used was FASTA [version 34.26.5 April 26, 2007]