# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm04283.fasta.nr -Q bm04283.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm04283, 391 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6820137 sequences Expectation_n fit: rho(ln(x))= 5.4542+/-0.000203; mu= 10.1298+/- 0.012 mean_var=95.8563+/-19.379, 0's: 31 Z-trim: 56 B-trim: 4774 in 3/65 Lambda= 0.130998 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62089210|dbj|BAD93049.1| stromal cell derived f ( 391) 2634 507.8 1.4e-141 gi|5442036|gb|AAD43217.1|AF109126_1 stromal cell-d ( 398) 2131 412.7 6e-113 gi|194038709|ref|XP_001928700.1| PREDICTED: neurop ( 398) 2053 398.0 1.7e-108 gi|1806278|emb|CAA67712.1| glycoprotein 56 [Rattus ( 393) 2031 393.8 2.9e-107 gi|149041843|gb|EDL95684.1| stromal cell derived f ( 394) 2031 393.8 2.9e-107 gi|149041842|gb|EDL95683.1| stromal cell derived f ( 397) 2031 393.8 2.9e-107 gi|148694008|gb|EDL25955.1| neuroplastin, isoform ( 397) 2013 390.4 3.1e-106 gi|126272248|ref|XP_001365249.1| PREDICTED: simila ( 398) 1934 375.5 9.7e-102 gi|57997036|emb|CAB55909.2| hypothetical protein [ ( 308) 1901 369.2 6.1e-100 gi|74000967|ref|XP_544762.2| PREDICTED: similar to ( 361) 1870 363.4 4e-98 gi|149691790|ref|XP_001493770.1| PREDICTED: neurop ( 361) 1837 357.1 3e-96 gi|118095517|ref|XP_413703.2| PREDICTED: similar t ( 397) 1646 321.1 2.4e-85 gi|47216173|emb|CAG03161.1| unnamed protein produc ( 391) 1545 302.0 1.3e-79 gi|111307843|gb|AAI21361.1| LOC733721 protein [Xen ( 436) 1477 289.2 1e-75 gi|134054386|emb|CAM73187.1| zgc:77326 [Danio reri ( 403) 1420 278.4 1.7e-72 gi|41944575|gb|AAH65957.1| Zgc:77326 [Danio rerio] ( 403) 1420 278.4 1.7e-72 gi|74725745|sp|Q9Y639.1|NPTN_HUMAN Neuroplastin pr ( 282) 1165 230.0 4.3e-58 gi|2661041|gb|AAB88179.1| similar to synaptic memb ( 154) 1085 214.7 9.9e-54 gi|47718024|gb|AAH70947.1| Nptn protein [Rattus no ( 277) 1070 212.1 1.1e-52 gi|81870588|sp|P97546|NPTN_RAT Neuroplastin precur ( 281) 1070 212.1 1.1e-52 gi|1747304|dbj|BAA09054.1| SDR1 [Mus musculus] ( 281) 1052 208.7 1.1e-51 gi|85687568|sp|P97300|NPTN_MOUSE Neuroplastin prec ( 281) 1052 208.7 1.1e-51 gi|148694009|gb|EDL25956.1| neuroplastin, isoform ( 290) 1052 208.7 1.2e-51 gi|111306966|gb|AAI19904.1| Neuroplastin [Bos taur ( 278) 1048 207.9 1.9e-51 gi|26344409|dbj|BAC35855.1| unnamed protein produc ( 277) 1046 207.5 2.5e-51 gi|74150447|dbj|BAE32261.1| unnamed protein produc ( 281) 1046 207.5 2.5e-51 gi|126272250|ref|XP_001365317.1| PREDICTED: simila ( 282) 1015 201.7 1.5e-49 gi|119598336|gb|EAW77930.1| neuroplastin, isoform ( 138) 957 190.4 1.8e-46 gi|47215659|emb|CAG01376.1| unnamed protein produc ( 381) 829 166.6 6.9e-39 gi|32394899|gb|AAO12873.1| 5A11/Basigin-2 [Danio r ( 391) 829 166.7 7.1e-39 gi|165993231|emb|CAP71927.1| bsg [Danio rerio] ( 371) 814 163.8 4.9e-38 gi|120577498|gb|AAI30129.1| LOC100037021 protein [ ( 387) 784 158.2 2.5e-36 gi|51704257|sp|P17790|BASI_CHICK Basigin precursor ( 388) 782 157.8 3.3e-36 gi|41107582|gb|AAH65473.1| Zgc:162565 protein [Dan ( 276) 738 149.3 8.3e-34 gi|63101845|gb|AAH95244.1| Zgc:162565 protein [Dan ( 308) 738 149.4 8.9e-34 gi|49904456|gb|AAH76041.1| Zgc:162565 protein [Dan ( 338) 738 149.4 9.6e-34 gi|66911941|gb|AAH97209.1| Zgc:162565 protein [Dan ( 310) 733 148.4 1.7e-33 gi|94573516|gb|AAI16566.1| Zgc:162565 protein [Dan ( 341) 733 148.5 1.9e-33 gi|115313782|gb|AAI24148.1| Zgc:162565 protein [Da ( 343) 733 148.5 1.9e-33 gi|126323754|ref|XP_001375891.1| PREDICTED: simila ( 411) 726 147.2 5.3e-33 gi|134026334|gb|AAI35024.1| Zgc:162565 protein [Da ( 277) 719 145.7 1e-32 gi|116487700|gb|AAI26049.1| LOC398501 protein [Xen ( 290) 693 140.8 3.1e-31 gi|28279876|gb|AAH44289.1| LOC398501 protein [Xeno ( 303) 693 140.9 3.2e-31 gi|66912025|gb|AAH97579.1| Unknown (protein for IM ( 320) 693 140.9 3.3e-31 gi|47937767|gb|AAH72333.1| LOC398501 protein [Xeno ( 321) 693 140.9 3.3e-31 gi|80477776|gb|AAI08751.1| LOC398501 protein [Xeno ( 321) 693 140.9 3.3e-31 gi|89272117|emb|CAJ82178.1| stromal cell derived f ( 291) 672 136.9 4.9e-30 gi|109122669|ref|XP_001117081.1| PREDICTED: simila ( 485) 672 137.1 7e-30 gi|51704273|sp|P35613|BASI_HUMAN Basigin precursor ( 385) 666 135.8 1.3e-29 gi|94734153|emb|CAK10947.1| basigin [Danio rerio] ( 404) 664 135.5 1.8e-29 >>gi|62089210|dbj|BAD93049.1| stromal cell derived facto (391 aa) initn: 2634 init1: 2634 opt: 2634 Z-score: 2696.7 bits: 507.8 E(): 1.4e-141 Smith-Waterman score: 2634; 100.000% identity (100.000% similar) in 391 aa overlap (1-391:1-391) 10 20 30 40 50 60 bm0428 LRRQEEDGEGRSRAAAASLAHSLAHSPAPSLPPLPSPAPALAPAHSLLGLLLGRMSGSSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LRRQEEDGEGRSRAAAASLAHSLAHSPAPSLPPLPSPAPALAPAHSLLGLLLGRMSGSSL 10 20 30 40 50 60 70 80 90 100 110 120 bm0428 PSALALSLLLVSGSLLPGPGAAQNAGFVKSPMSETKLTGDAFELYCDVVGSPTPEIQWWY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PSALALSLLLVSGSLLPGPGAAQNAGFVKSPMSETKLTGDAFELYCDVVGSPTPEIQWWY 70 80 90 100 110 120 130 140 150 160 170 180 bm0428 AEVNRAESFRQLWDGARKRRVTVNTAYGSNGVSVLRITRLTLEDSGTYECRASNDPKRND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 AEVNRAESFRQLWDGARKRRVTVNTAYGSNGVSVLRITRLTLEDSGTYECRASNDPKRND 130 140 150 160 170 180 190 200 210 220 230 240 bm0428 LRQNPSITWIRAQATISVLQKPRIVTSEEVIIRDSPVLPVTLQCNLTSSSHTLTYSYWTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LRQNPSITWIRAQATISVLQKPRIVTSEEVIIRDSPVLPVTLQCNLTSSSHTLTYSYWTK 190 200 210 220 230 240 250 260 270 280 290 300 bm0428 NGVELSATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 NGVELSATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRS 250 260 270 280 290 300 310 320 330 340 350 360 bm0428 ENKNEGQDATMYCKSVGYPHPDWIWRKKENGMPMDIVNTSGRFFIINKENYTELNIVNLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ENKNEGQDATMYCKSVGYPHPDWIWRKKENGMPMDIVNTSGRFFIINKENYTELNIVNLQ 310 320 330 340 350 360 370 380 390 bm0428 ITEDPGEYECNATWPHSGLSWEFWLKLSSLW ::::::::::::::::::::::::::::::: gi|620 ITEDPGEYECNATWPHSGLSWEFWLKLSSLW 370 380 390 >>gi|5442036|gb|AAD43217.1|AF109126_1 stromal cell-deriv (398 aa) initn: 2131 init1: 2131 opt: 2131 Z-score: 2182.9 bits: 412.7 E(): 6e-113 Smith-Waterman score: 2131; 100.000% identity (100.000% similar) in 319 aa overlap (55-373:1-319) 30 40 50 60 70 80 bm0428 HSPAPSLPPLPSPAPALAPAHSLLGLLLGRMSGSSLPSALALSLLLVSGSLLPGPGAAQN :::::::::::::::::::::::::::::: gi|544 MSGSSLPSALALSLLLVSGSLLPGPGAAQN 10 20 30 90 100 110 120 130 140 bm0428 AGFVKSPMSETKLTGDAFELYCDVVGSPTPEIQWWYAEVNRAESFRQLWDGARKRRVTVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|544 AGFVKSPMSETKLTGDAFELYCDVVGSPTPEIQWWYAEVNRAESFRQLWDGARKRRVTVN 40 50 60 70 80 90 150 160 170 180 190 200 bm0428 TAYGSNGVSVLRITRLTLEDSGTYECRASNDPKRNDLRQNPSITWIRAQATISVLQKPRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|544 TAYGSNGVSVLRITRLTLEDSGTYECRASNDPKRNDLRQNPSITWIRAQATISVLQKPRI 100 110 120 130 140 150 210 220 230 240 250 260 bm0428 VTSEEVIIRDSPVLPVTLQCNLTSSSHTLTYSYWTKNGVELSATRKNASNMEYRINKPRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|544 VTSEEVIIRDSPVLPVTLQCNLTSSSHTLTYSYWTKNGVELSATRKNASNMEYRINKPRA 160 170 180 190 200 210 270 280 290 300 310 320 bm0428 EDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDATMYCKSVGYPHPDWI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|544 EDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDATMYCKSVGYPHPDWI 220 230 240 250 260 270 330 340 350 360 370 380 bm0428 WRKKENGMPMDIVNTSGRFFIINKENYTELNIVNLQITEDPGEYECNATWPHSGLSWEFW ::::::::::::::::::::::::::::::::::::::::::::::::: gi|544 WRKKENGMPMDIVNTSGRFFIINKENYTELNIVNLQITEDPGEYECNATNAIGSASVVTV 280 290 300 310 320 330 390 bm0428 LKLSSLW gi|544 LRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRKRPDEVPDDDEPAGPMKTNSTNNHKDK 340 350 360 370 380 390 >>gi|194038709|ref|XP_001928700.1| PREDICTED: neuroplast (398 aa) initn: 2052 init1: 2052 opt: 2053 Z-score: 2103.2 bits: 398.0 E(): 1.7e-108 Smith-Waterman score: 2053; 91.202% identity (95.601% similar) in 341 aa overlap (55-391:1-341) 30 40 50 60 70 80 bm0428 HSPAPSLPPLPSPAPALAPAHSLLGLLLGRMSGSSLPSALALSLLLVSGSLLPGPGAAQN : :::::::::::::::::::::::::::: gi|194 MLGSSLPSALALSLLLVSGSLLPGPGAAQN 10 20 30 90 100 110 120 130 140 bm0428 AGFVKSPMSETKLTGDAFELYCDVVGSPTPEIQWWYAEVNRAESFRQLWDGARKRRVTVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 AGFVKSPMSETKLTGDAFELYCDVVGSPTPEIQWWYAEVNRAESFRQLWDGARKRRVTVN 40 50 60 70 80 90 150 160 170 180 190 200 bm0428 TAYGSNGVSVLRITRLTLEDSGTYECRASNDPKRNDLRQNPSITWIRAQATISVLQKPRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TAYGSNGVSVLRITRLTLEDSGTYECRASNDPKRNDLRQNPSITWIRAQATISVLQKPRI 100 110 120 130 140 150 210 220 230 240 250 260 bm0428 VTSEEVIIRDSPVLPVTLQCNLTSSSHTLTYSYWTKNGVELSATRKNASNMEYRINKPRA :::::::::.::::::::::::::.::::::::::::::::.:::::::::::::::::: gi|194 VTSEEVIIRESPVLPVTLQCNLTSNSHTLTYSYWTKNGVELTATRKNASNMEYRINKPRA 160 170 180 190 200 210 270 280 290 300 310 320 bm0428 EDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDATMYCKSVGYPHPDWI ::::::::::::.:::::::::::::::::::::::::::::::: :::::::::::.:: gi|194 EDSGEYHCVYHFASAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWI 220 230 240 250 260 270 330 340 350 360 370 380 bm0428 WRKKENGMPMDIVNTSGRFFIINKENYTELNIVNLQITEDPGEYECNATWPHSGLSWEFW :::::::: .:::::::::.:::.::::::.:.:::::::::::::::: ...: gi|194 WRKKENGMLVDIVNTSGRFIIINRENYTELSIMNLQITEDPGEYECNATNSIGSVSVVTI 280 290 300 310 320 330 390 bm0428 LKLSS----LW :.. : :: gi|194 LRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRKRPDEVPDDDEPAGPMKTNSTNNHKDK 340 350 360 370 380 390 >>gi|1806278|emb|CAA67712.1| glycoprotein 56 [Rattus nor (393 aa) initn: 2029 init1: 1046 opt: 2031 Z-score: 2080.8 bits: 393.8 E(): 2.9e-107 Smith-Waterman score: 2031; 95.611% identity (98.119% similar) in 319 aa overlap (55-373:1-318) 30 40 50 60 70 80 bm0428 HSPAPSLPPLPSPAPALAPAHSLLGLLLGRMSGSSLPSALALSLLLVSGSLLPGPGAAQN :::::::.:::::::::::::::::::::: gi|180 MSGSSLPGALALSLLLVSGSLLPGPGAAQN 10 20 30 90 100 110 120 130 140 bm0428 AGFVKSPMSETKLTGDAFELYCDVVGSPTPEIQWWYAEVNRAESFRQLWDGARKRRVTVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|180 AGFVKSPMSETKLTGDAFELYCDVVGSPTPEIQWWYAEVNRAESFRQLWDGARKRRVTVN 40 50 60 70 80 90 150 160 170 180 190 200 bm0428 TAYGSNGVSVLRITRLTLEDSGTYECRASNDPKRNDLRQNPSITWIRAQATISVLQKPRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|180 TAYGSNGVSVLRITRLTLEDSGTYECRASNDPKRNDLRQNPSITWIRAQATISVLQKPRI 100 110 120 130 140 150 210 220 230 240 250 260 bm0428 VTSEEVIIRDSPVLPVTLQCNLTSSSHTLTYSYWTKNGVELSATRKNASNMEYRINKPRA ::::::::::: .:::::::::::::::: :::::::::::.:::::::::::::::::: gi|180 VTSEEVIIRDS-LLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNASNMEYRINKPRA 160 170 180 190 200 270 280 290 300 310 320 bm0428 EDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDATMYCKSVGYPHPDWI ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::.:. gi|180 EDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWM 210 220 230 240 250 260 330 340 350 360 370 380 bm0428 WRKKENGMPMDIVNTSGRFFIINKENYTELNIVNLQITEDPGEYECNATWPHSGLSWEFW :::::::. .: :.:::::::::::::::::::::::::::::::::: gi|180 WRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTV 270 280 290 300 310 320 390 bm0428 LKLSSLW gi|180 LRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRKRPDEVPDAGPMKTNSTNNHKDKNLRQ 330 340 350 360 370 380 >>gi|149041843|gb|EDL95684.1| stromal cell derived facto (394 aa) initn: 2029 init1: 1046 opt: 2031 Z-score: 2080.8 bits: 393.8 E(): 2.9e-107 Smith-Waterman score: 2031; 95.611% identity (98.119% similar) in 319 aa overlap (55-373:1-318) 30 40 50 60 70 80 bm0428 HSPAPSLPPLPSPAPALAPAHSLLGLLLGRMSGSSLPSALALSLLLVSGSLLPGPGAAQN :::::::.:::::::::::::::::::::: gi|149 MSGSSLPGALALSLLLVSGSLLPGPGAAQN 10 20 30 90 100 110 120 130 140 bm0428 AGFVKSPMSETKLTGDAFELYCDVVGSPTPEIQWWYAEVNRAESFRQLWDGARKRRVTVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AGFVKSPMSETKLTGDAFELYCDVVGSPTPEIQWWYAEVNRAESFRQLWDGARKRRVTVN 40 50 60 70 80 90 150 160 170 180 190 200 bm0428 TAYGSNGVSVLRITRLTLEDSGTYECRASNDPKRNDLRQNPSITWIRAQATISVLQKPRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TAYGSNGVSVLRITRLTLEDSGTYECRASNDPKRNDLRQNPSITWIRAQATISVLQKPRI 100 110 120 130 140 150 210 220 230 240 250 260 bm0428 VTSEEVIIRDSPVLPVTLQCNLTSSSHTLTYSYWTKNGVELSATRKNASNMEYRINKPRA ::::::::::: .:::::::::::::::: :::::::::::.:::::::::::::::::: gi|149 VTSEEVIIRDS-LLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNASNMEYRINKPRA 160 170 180 190 200 270 280 290 300 310 320 bm0428 EDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDATMYCKSVGYPHPDWI ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::.:. gi|149 EDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWM 210 220 230 240 250 260 330 340 350 360 370 380 bm0428 WRKKENGMPMDIVNTSGRFFIINKENYTELNIVNLQITEDPGEYECNATWPHSGLSWEFW :::::::. .: :.:::::::::::::::::::::::::::::::::: gi|149 WRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTV 270 280 290 300 310 320 390 bm0428 LKLSSLW gi|149 LRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRKRPDEVPDGKPTLPTITKIKTCARETQ 330 340 350 360 370 380 >>gi|149041842|gb|EDL95683.1| stromal cell derived facto (397 aa) initn: 2029 init1: 1046 opt: 2031 Z-score: 2080.8 bits: 393.8 E(): 2.9e-107 Smith-Waterman score: 2031; 95.611% identity (98.119% similar) in 319 aa overlap (55-373:1-318) 30 40 50 60 70 80 bm0428 HSPAPSLPPLPSPAPALAPAHSLLGLLLGRMSGSSLPSALALSLLLVSGSLLPGPGAAQN :::::::.:::::::::::::::::::::: gi|149 MSGSSLPGALALSLLLVSGSLLPGPGAAQN 10 20 30 90 100 110 120 130 140 bm0428 AGFVKSPMSETKLTGDAFELYCDVVGSPTPEIQWWYAEVNRAESFRQLWDGARKRRVTVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AGFVKSPMSETKLTGDAFELYCDVVGSPTPEIQWWYAEVNRAESFRQLWDGARKRRVTVN 40 50 60 70 80 90 150 160 170 180 190 200 bm0428 TAYGSNGVSVLRITRLTLEDSGTYECRASNDPKRNDLRQNPSITWIRAQATISVLQKPRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TAYGSNGVSVLRITRLTLEDSGTYECRASNDPKRNDLRQNPSITWIRAQATISVLQKPRI 100 110 120 130 140 150 210 220 230 240 250 260 bm0428 VTSEEVIIRDSPVLPVTLQCNLTSSSHTLTYSYWTKNGVELSATRKNASNMEYRINKPRA ::::::::::: .:::::::::::::::: :::::::::::.:::::::::::::::::: gi|149 VTSEEVIIRDS-LLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNASNMEYRINKPRA 160 170 180 190 200 270 280 290 300 310 320 bm0428 EDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDATMYCKSVGYPHPDWI ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::.:. gi|149 EDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWM 210 220 230 240 250 260 330 340 350 360 370 380 bm0428 WRKKENGMPMDIVNTSGRFFIINKENYTELNIVNLQITEDPGEYECNATWPHSGLSWEFW :::::::. .: :.:::::::::::::::::::::::::::::::::: gi|149 WRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTV 270 280 290 300 310 320 390 bm0428 LKLSSLW gi|149 LRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRKRPDEVPDDDEPAGPMKTNSTNNHKDK 330 340 350 360 370 380 >>gi|148694008|gb|EDL25955.1| neuroplastin, isoform CRA_ (397 aa) initn: 2011 init1: 1040 opt: 2013 Z-score: 2062.4 bits: 390.4 E(): 3.1e-106 Smith-Waterman score: 2013; 94.671% identity (97.806% similar) in 319 aa overlap (55-373:1-318) 30 40 50 60 70 80 bm0428 HSPAPSLPPLPSPAPALAPAHSLLGLLLGRMSGSSLPSALALSLLLVSGSLLPGPGAAQN :::::::.:::::::::::::::::::::: gi|148 MSGSSLPGALALSLLLVSGSLLPGPGAAQN 10 20 30 90 100 110 120 130 140 bm0428 AGFVKSPMSETKLTGDAFELYCDVVGSPTPEIQWWYAEVNRAESFRQLWDGARKRRVTVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AGFVKSPMSETKLTGDAFELYCDVVGSPTPEIQWWYAEVNRAESFRQLWDGARKRRVTVN 40 50 60 70 80 90 150 160 170 180 190 200 bm0428 TAYGSNGVSVLRITRLTLEDSGTYECRASNDPKRNDLRQNPSITWIRAQATISVLQKPRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TAYGSNGVSVLRITRLTLEDSGTYECRASNDPKRNDLRQNPSITWIRAQATISVLQKPRI 100 110 120 130 140 150 210 220 230 240 250 260 bm0428 VTSEEVIIRDSPVLPVTLQCNLTSSSHTLTYSYWTKNGVELSATRKNASNMEYRINKPRA :::::::::.: .:::::::::::::::: :::::.:::::.:::::::::::::::::: gi|148 VTSEEVIIRES-LLPVTLQCNLTSSSHTLMYSYWTRNGVELTATRKNASNMEYRINKPRA 160 170 180 190 200 270 280 290 300 310 320 bm0428 EDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDATMYCKSVGYPHPDWI ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::.:: gi|148 EDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWI 210 220 230 240 250 260 330 340 350 360 370 380 bm0428 WRKKENGMPMDIVNTSGRFFIINKENYTELNIVNLQITEDPGEYECNATWPHSGLSWEFW :::::::. .: :.:::::: ::::::::.:::::::::::::::::: gi|148 WRKKENGVFEEISNSSGRFFITNKENYTELSIVNLQITEDPGEYECNATNSIGSASVSTV 270 280 290 300 310 320 390 bm0428 LKLSSLW gi|148 LRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRKRPDEVPDDDEPAGPMKTNSTNNHKDK 330 340 350 360 370 380 >>gi|126272248|ref|XP_001365249.1| PREDICTED: similar to (398 aa) initn: 1934 init1: 1934 opt: 1934 Z-score: 1981.7 bits: 375.5 E(): 9.7e-102 Smith-Waterman score: 1934; 89.028% identity (96.238% similar) in 319 aa overlap (55-373:1-319) 30 40 50 60 70 80 bm0428 HSPAPSLPPLPSPAPALAPAHSLLGLLLGRMSGSSLPSALALSLLLVSGSLLPGPGAAQN ::::::::.::::::::.::::: :::::: gi|126 MSGSSLPSSLALSLLLVTGSLLPVPGAAQN 10 20 30 90 100 110 120 130 140 bm0428 AGFVKSPMSETKLTGDAFELYCDVVGSPTPEIQWWYAEVNRAESFRQLWDGARKRRVTVN ::::::::::::::::::::::::::::::::::::::::. :::::::::::::::::: gi|126 AGFVKSPMSETKLTGDAFELYCDVVGSPTPEIQWWYAEVNQPESFRQLWDGARKRRVTVN 40 50 60 70 80 90 150 160 170 180 190 200 bm0428 TAYGSNGVSVLRITRLTLEDSGTYECRASNDPKRNDLRQNPSITWIRAQATISVLQKPRI :::::::::::::: :::::::::::::::::.:::::::::.::::::::::::::::: gi|126 TAYGSNGVSVLRITGLTLEDSGTYECRASNDPRRNDLRQNPSLTWIRAQATISVLQKPRI 100 110 120 130 140 150 210 220 230 240 250 260 bm0428 VTSEEVIIRDSPVLPVTLQCNLTSSSHTLTYSYWTKNGVELSATRKNASNMEYRINKPRA :::.::::::::. :::::::::::.: :::::::::::..::::.:::::..::::. gi|126 VTSDEVIIRDSPAPSFTLQCNLTSSSHSLQYSYWTKNGVELTTTRKNVSNMEYKVNKPRS 160 170 180 190 200 210 270 280 290 300 310 320 bm0428 EDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDATMYCKSVGYPHPDWI :::::::::..:..:::::::::::: :.:::::::::::::::: :::::::::::.:: gi|126 EDSGEYHCVFQFLNAPKANATIEVKALPEITGHKRSENKNEGQDALMYCKSVGYPHPEWI 220 230 240 250 260 270 330 340 350 360 370 380 bm0428 WRKKENGMPMDIVNTSGRFFIINKENYTELNIVNLQITEDPGEYECNATWPHSGLSWEFW :::::::. ::.::::::::: :::::::: :.:::::::::::::::: gi|126 WRKKENGIFMDLVNTSGRFFITNKENYTELYIINLQITEDPGEYECNATNTIGSDSFVTV 280 290 300 310 320 330 390 bm0428 LKLSSLW gi|126 LRVRSHLAPLWPFLGILAEIIILVVIILIYEKRKRPDEVPDDDEPAGPMKTNSTNNHKDK 340 350 360 370 380 390 >>gi|57997036|emb|CAB55909.2| hypothetical protein [Homo (308 aa) initn: 1901 init1: 1901 opt: 1901 Z-score: 1949.4 bits: 369.2 E(): 6.1e-100 Smith-Waterman score: 1901; 100.000% identity (100.000% similar) in 282 aa overlap (92-373:1-282) 70 80 90 100 110 120 bm0428 SALALSLLLVSGSLLPGPGAAQNAGFVKSPMSETKLTGDAFELYCDVVGSPTPEIQWWYA :::::::::::::::::::::::::::::: gi|579 MSETKLTGDAFELYCDVVGSPTPEIQWWYA 10 20 30 130 140 150 160 170 180 bm0428 EVNRAESFRQLWDGARKRRVTVNTAYGSNGVSVLRITRLTLEDSGTYECRASNDPKRNDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 EVNRAESFRQLWDGARKRRVTVNTAYGSNGVSVLRITRLTLEDSGTYECRASNDPKRNDL 40 50 60 70 80 90 190 200 210 220 230 240 bm0428 RQNPSITWIRAQATISVLQKPRIVTSEEVIIRDSPVLPVTLQCNLTSSSHTLTYSYWTKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 RQNPSITWIRAQATISVLQKPRIVTSEEVIIRDSPVLPVTLQCNLTSSSHTLTYSYWTKN 100 110 120 130 140 150 250 260 270 280 290 300 bm0428 GVELSATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 GVELSATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRSE 160 170 180 190 200 210 310 320 330 340 350 360 bm0428 NKNEGQDATMYCKSVGYPHPDWIWRKKENGMPMDIVNTSGRFFIINKENYTELNIVNLQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 NKNEGQDATMYCKSVGYPHPDWIWRKKENGMPMDIVNTSGRFFIINKENYTELNIVNLQI 220 230 240 250 260 270 370 380 390 bm0428 TEDPGEYECNATWPHSGLSWEFWLKLSSLW :::::::::::: gi|579 TEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLG 280 290 300 >>gi|74000967|ref|XP_544762.2| PREDICTED: similar to str (361 aa) initn: 1870 init1: 1870 opt: 1870 Z-score: 1916.8 bits: 363.4 E(): 4e-98 Smith-Waterman score: 1870; 97.518% identity (99.645% similar) in 282 aa overlap (92-373:1-282) 70 80 90 100 110 120 bm0428 SALALSLLLVSGSLLPGPGAAQNAGFVKSPMSETKLTGDAFELYCDVVGSPTPEIQWWYA :::::::::::::::::::::::::::::: gi|740 MSETKLTGDAFELYCDVVGSPTPEIQWWYA 10 20 30 130 140 150 160 170 180 bm0428 EVNRAESFRQLWDGARKRRVTVNTAYGSNGVSVLRITRLTLEDSGTYECRASNDPKRNDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 EVNRAESFRQLWDGARKRRVTVNTAYGSNGVSVLRITRLTLEDSGTYECRASNDPKRNDL 40 50 60 70 80 90 190 200 210 220 230 240 bm0428 RQNPSITWIRAQATISVLQKPRIVTSEEVIIRDSPVLPVTLQCNLTSSSHTLTYSYWTKN ::::::::::::::::::::::::::::.:.::::::::::::::::::::::::::::: gi|740 RQNPSITWIRAQATISVLQKPRIVTSEEIILRDSPVLPVTLQCNLTSSSHTLTYSYWTKN 100 110 120 130 140 150 250 260 270 280 290 300 bm0428 GVELSATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRSE ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 GVELTATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRSE 160 170 180 190 200 210 310 320 330 340 350 360 bm0428 NKNEGQDATMYCKSVGYPHPDWIWRKKENGMPMDIVNTSGRFFIINKENYTELNIVNLQI :::::::: :::::::::::.:::::::::::.::::::::::::::::::::.:::::: gi|740 NKNEGQDAMMYCKSVGYPHPEWIWRKKENGMPVDIVNTSGRFFIINKENYTELSIVNLQI 220 230 240 250 260 270 370 380 390 bm0428 TEDPGEYECNATWPHSGLSWEFWLKLSSLW :::::::::::: gi|740 TEDPGEYECNATNSIGSASVVTILRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRKRPD 280 290 300 310 320 330 391 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Thu Aug 7 19:03:42 2008 done: Thu Aug 7 19:06:11 2008 Total Scan time: 810.940 Total Display time: 0.080 Function used was FASTA [version 34.26.5 April 26, 2007]