# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm04335.fasta.nr -Q bm04335.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm04335, 448 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6823147 sequences Expectation_n fit: rho(ln(x))= 5.1856+/-0.000189; mu= 11.2695+/- 0.011 mean_var=79.2029+/-15.308, 0's: 41 Z-trim: 55 B-trim: 3132 in 1/66 Lambda= 0.144113 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62089212|dbj|BAD93050.1| HIV-1 Tat interactive ( 448) 3023 638.0 1.2e-180 gi|148701209|gb|EDL33156.1| HIV-1 tat interactive ( 469) 2964 625.8 6e-177 gi|34782810|gb|AAH00166.3| KAT5 protein [Homo sapi ( 457) 2936 620.0 3.3e-175 gi|75055068|sp|Q5RBG4.1|TIP60_PONAB Histone acetyl ( 461) 2936 620.0 3.3e-175 gi|61371562|gb|AAX43690.1| HIV-1 Tat interacting p ( 462) 2936 620.0 3.3e-175 gi|148701208|gb|EDL33155.1| HIV-1 tat interactive ( 457) 2932 619.1 5.9e-175 gi|125858009|gb|AAI29968.1| Htatip protein [Mus mu ( 460) 2932 619.1 5.9e-175 gi|25992522|gb|AAN77142.1| tat-interactive 60 kDa ( 461) 2932 619.1 5.9e-175 gi|73983070|ref|XP_866353.1| PREDICTED: similar to ( 494) 2932 619.2 6.2e-175 gi|149062089|gb|EDM12512.1| HIV-1 tat interactive ( 494) 2932 619.2 6.2e-175 gi|4097714|gb|AAD00163.1| cPLA2 interacting protei ( 461) 2930 618.7 7.9e-175 gi|149725417|ref|XP_001494276.1| PREDICTED: simila ( 461) 2927 618.1 1.2e-174 gi|126338796|ref|XP_001365749.1| PREDICTED: simila ( 461) 2910 614.6 1.4e-173 gi|119919274|ref|XP_001254793.1| PREDICTED: simila ( 533) 2860 604.2 2.1e-170 gi|149725419|ref|XP_001494340.1| PREDICTED: simila ( 472) 2854 602.9 4.6e-170 gi|73983064|ref|XP_866315.1| PREDICTED: similar to ( 458) 2839 599.8 3.9e-169 gi|13377734|gb|AAK20836.1| TIP60B [Rattus norvegic ( 392) 2637 557.7 1.5e-156 gi|30923328|sp|Q92993|TIP60_HUMAN Histone acetyltr ( 513) 2493 527.9 1.9e-147 gi|114638602|ref|XP_508558.2| PREDICTED: HIV-1 Tat ( 546) 2493 527.9 2e-147 gi|119594835|gb|EAW74429.1| HIV-1 Tat interacting ( 546) 2493 527.9 2e-147 gi|38605270|sp|Q8CHK4|TIP60_MOUSE Histone acetyltr ( 513) 2489 527.1 3.4e-147 gi|73983068|ref|XP_540849.2| PREDICTED: similar to ( 546) 2489 527.1 3.6e-147 gi|148701207|gb|EDL33154.1| HIV-1 tat interactive ( 546) 2489 527.1 3.6e-147 gi|25992518|gb|AAN77140.1| tat-interactive 60 kDa ( 386) 2483 525.7 6.6e-147 gi|76658164|ref|XP_581934.2| PREDICTED: similar to ( 513) 2484 526.0 7e-147 gi|149725415|ref|XP_001494234.1| PREDICTED: simila ( 513) 2484 526.0 7e-147 gi|189053845|dbj|BAG36104.1| unnamed protein produ ( 513) 2484 526.0 7e-147 gi|1381394|gb|AAB02683.1| tat interactive protein ( 482) 2482 525.6 8.9e-147 gi|1657982|gb|AAB18236.1| tat interactive protein ( 513) 2482 525.6 9.4e-147 gi|126338794|ref|XP_001365686.1| PREDICTED: simila ( 513) 2471 523.3 4.6e-146 gi|109105466|ref|XP_001112915.1| PREDICTED: HIV-1 ( 384) 2466 522.2 7.6e-146 gi|109105462|ref|XP_001113069.1| PREDICTED: HIV-1 ( 390) 2461 521.1 1.6e-145 gi|109105464|ref|XP_001112981.1| PREDICTED: HIV-1 ( 423) 2461 521.2 1.7e-145 gi|113197625|gb|AAI21280.1| Hypothetical protein M ( 506) 2232 473.6 4.1e-131 gi|169641801|gb|AAI60398.1| MGC145349 protein [Xen ( 505) 2214 469.9 5.5e-130 gi|169145978|emb|CAQ13293.1| novel protein similar ( 520) 2147 456.0 8.8e-126 gi|60416012|gb|AAH90743.1| Zgc:110752 [Danio rerio ( 538) 2075 441.0 2.9e-121 gi|27529953|dbj|BAC53807.1| HIV-1 tat interactive ( 302) 2057 437.1 2.5e-120 gi|49902830|gb|AAH76045.1| Zgc:92510 [Danio rerio] ( 541) 2049 435.6 1.2e-119 gi|109105458|ref|XP_001113038.1| PREDICTED: HIV-1 ( 442) 2018 429.1 9.2e-118 gi|109105460|ref|XP_001113008.1| PREDICTED: HIV-1 ( 475) 2018 429.1 9.7e-118 gi|115653127|ref|XP_786024.2| PREDICTED: similar t ( 440) 1929 410.6 3.4e-112 gi|134105415|pdb|2OU2|A Chain A, Acetyltransferase ( 280) 1892 402.7 5e-110 gi|73983066|ref|XP_866329.1| PREDICTED: similar to ( 439) 1767 376.9 4.7e-102 gi|167865335|gb|EDS28718.1| histone acetyltransfer ( 458) 1751 373.6 4.9e-101 gi|110759952|ref|XP_396552.3| PREDICTED: similar t ( 453) 1747 372.7 8.6e-101 gi|156537355|ref|XP_001606507.1| PREDICTED: simila ( 457) 1746 372.5 1e-100 gi|91081059|ref|XP_975410.1| PREDICTED: similar to ( 459) 1737 370.7 3.7e-100 gi|193624672|ref|XP_001943386.1| PREDICTED: simila ( 456) 1709 364.8 2.1e-98 gi|190648499|gb|EDV45777.1| EG:EG0007.7 [Drosophil ( 542) 1707 364.5 3.1e-98 >>gi|62089212|dbj|BAD93050.1| HIV-1 Tat interactive prot (448 aa) initn: 3023 init1: 3023 opt: 3023 Z-score: 3398.5 bits: 638.0 E(): 1.2e-180 Smith-Waterman score: 3023; 100.000% identity (100.000% similar) in 448 aa overlap (1-448:1-448) 10 20 30 40 50 60 bm0433 PGLSKAPVYAILIALAEILSVKDISGRKLFYVHYIDFNKRLDEWVTHERLDLKKIQFPKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PGLSKAPVYAILIALAEILSVKDISGRKLFYVHYIDFNKRLDEWVTHERLDLKKIQFPKK 10 20 30 40 50 60 70 80 90 100 110 120 bm0433 EAKTPTKNGLPGSRPGSPEREVKRKVEVVSPATPVPSETAPASVFPQNGAARRAVAAQPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EAKTPTKNGLPGSRPGSPEREVKRKVEVVSPATPVPSETAPASVFPQNGAARRAVAAQPG 70 80 90 100 110 120 130 140 150 160 170 180 bm0433 RKRKSNCLGTDEDSQDSSDGIPSAPRMTGSLVSDRSHDDIVTRMKNIECIELGRHRLKPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RKRKSNCLGTDEDSQDSSDGIPSAPRMTGSLVSDRSHDDIVTRMKNIECIELGRHRLKPW 130 140 150 160 170 180 190 200 210 220 230 240 bm0433 YFSPYPQELTTLPVLYLCEFCLKYGRSLKCLQRHLTKCDLRHPPGNEIYRKGTISFFEID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 YFSPYPQELTTLPVLYLCEFCLKYGRSLKCLQRHLTKCDLRHPPGNEIYRKGTISFFEID 190 200 210 220 230 240 250 260 270 280 290 300 bm0433 GRKNKSYSQNLCLLAKCFLDHKTLYYDTDPFLFYVMTEYDCKGFHIVGYFSKEKESTEDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GRKNKSYSQNLCLLAKCFLDHKTLYYDTDPFLFYVMTEYDCKGFHIVGYFSKEKESTEDY 250 260 270 280 290 300 310 320 330 340 350 360 bm0433 NVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDLGLLSYRSYWSQTILEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 NVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDLGLLSYRSYWSQTILEI 310 320 330 340 350 360 370 380 390 400 410 420 bm0433 LMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNLINYYKGQYILTLSEDIVDGHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNLINYYKGQYILTLSEDIVDGHE 370 380 390 400 410 420 430 440 bm0433 RAMLKRLLRIDSKCLHFTPKDWSKRGKW :::::::::::::::::::::::::::: gi|620 RAMLKRLLRIDSKCLHFTPKDWSKRGKW 430 440 >>gi|148701209|gb|EDL33156.1| HIV-1 tat interactive prot (469 aa) initn: 2964 init1: 2964 opt: 2964 Z-score: 3332.0 bits: 625.8 E(): 6e-177 Smith-Waterman score: 2964; 98.649% identity (99.550% similar) in 444 aa overlap (5-448:26-469) 10 20 30 bm0433 PGLSKAPVYAILIALAEILSVKDISGRKLFYVHYIDFNK . :: ..:::::::::::::::::::::::::::: gi|148 VLGHRPPAWRWDSGRRVESPDLPWLRLPVCVVLIALAEILSVKDISGRKLFYVHYIDFNK 10 20 30 40 50 60 40 50 60 70 80 90 bm0433 RLDEWVTHERLDLKKIQFPKKEAKTPTKNGLPGSRPGSPEREVKRKVEVVSPATPVPSET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RLDEWVTHERLDLKKIQFPKKEAKTPTKNGLPGSRPGSPEREVKRKVEVVSPATPVPSET 70 80 90 100 110 120 100 110 120 130 140 150 bm0433 APASVFPQNGAARRAVAAQPGRKRKSNCLGTDEDSQDSSDGIPSAPRMTGSLVSDRSHDD ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 APASVFPQNGSARRAVAAQPGRKRKSNCLGTDEDSQDSSDGIPSAPRMTGSLVSDRSHDD 130 140 150 160 170 180 160 170 180 190 200 210 bm0433 IVTRMKNIECIELGRHRLKPWYFSPYPQELTTLPVLYLCEFCLKYGRSLKCLQRHLTKCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 IVTRMKNIECIELGRHRLKPWYFSPYPQELTTLPVLYLCEFCLKYGRSLKCLQRHLTKCD 190 200 210 220 230 240 220 230 240 250 260 270 bm0433 LRHPPGNEIYRKGTISFFEIDGRKNKSYSQNLCLLAKCFLDHKTLYYDTDPFLFYVMTEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LRHPPGNEIYRKGTISFFEIDGRKNKSYSQNLCLLAKCFLDHKTLYYDTDPFLFYVMTEY 250 260 270 280 290 300 280 290 300 310 320 330 bm0433 DCKGFHIVGYFSKEKESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DCKGFHIVGYFSKEKESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEK 310 320 330 340 350 360 340 350 360 370 380 390 bm0433 PLSDLGLLSYRSYWSQTILEILMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PLSDLGLLSYRSYWSQTILEILMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNL 370 380 390 400 410 420 400 410 420 430 440 bm0433 INYYKGQYILTLSEDIVDGHERAMLKRLLRIDSKCLHFTPKDWSKRGKW ::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 INYYKGQYILTLSEDIVDGHERAMLKRLLRIDSKCLHFTPKDWSKRGKW 430 440 450 460 >>gi|34782810|gb|AAH00166.3| KAT5 protein [Homo sapiens] (457 aa) initn: 2936 init1: 2936 opt: 2936 Z-score: 3300.7 bits: 620.0 E(): 3.3e-175 Smith-Waterman score: 2936; 100.000% identity (100.000% similar) in 434 aa overlap (15-448:24-457) 10 20 30 40 50 bm0433 PGLSKAPVYAILIALAEILSVKDISGRKLFYVHYIDFNKRLDEWVTHERLD ::::::::::::::::::::::::::::::::::::: gi|347 GEIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFNKRLDEWVTHERLD 10 20 30 40 50 60 60 70 80 90 100 110 bm0433 LKKIQFPKKEAKTPTKNGLPGSRPGSPEREVKRKVEVVSPATPVPSETAPASVFPQNGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 LKKIQFPKKEAKTPTKNGLPGSRPGSPEREVKRKVEVVSPATPVPSETAPASVFPQNGAA 70 80 90 100 110 120 120 130 140 150 160 170 bm0433 RRAVAAQPGRKRKSNCLGTDEDSQDSSDGIPSAPRMTGSLVSDRSHDDIVTRMKNIECIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 RRAVAAQPGRKRKSNCLGTDEDSQDSSDGIPSAPRMTGSLVSDRSHDDIVTRMKNIECIE 130 140 150 160 170 180 180 190 200 210 220 230 bm0433 LGRHRLKPWYFSPYPQELTTLPVLYLCEFCLKYGRSLKCLQRHLTKCDLRHPPGNEIYRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 LGRHRLKPWYFSPYPQELTTLPVLYLCEFCLKYGRSLKCLQRHLTKCDLRHPPGNEIYRK 190 200 210 220 230 240 240 250 260 270 280 290 bm0433 GTISFFEIDGRKNKSYSQNLCLLAKCFLDHKTLYYDTDPFLFYVMTEYDCKGFHIVGYFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 GTISFFEIDGRKNKSYSQNLCLLAKCFLDHKTLYYDTDPFLFYVMTEYDCKGFHIVGYFS 250 260 270 280 290 300 300 310 320 330 340 350 bm0433 KEKESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDLGLLSYRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 KEKESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDLGLLSYRS 310 320 330 340 350 360 360 370 380 390 400 410 bm0433 YWSQTILEILMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNLINYYKGQYILTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|347 YWSQTILEILMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNLINYYKGQYILTL 370 380 390 400 410 420 420 430 440 bm0433 SEDIVDGHERAMLKRLLRIDSKCLHFTPKDWSKRGKW ::::::::::::::::::::::::::::::::::::: gi|347 SEDIVDGHERAMLKRLLRIDSKCLHFTPKDWSKRGKW 430 440 450 >>gi|75055068|sp|Q5RBG4.1|TIP60_PONAB Histone acetyltran (461 aa) initn: 2936 init1: 2936 opt: 2936 Z-score: 3300.6 bits: 620.0 E(): 3.3e-175 Smith-Waterman score: 2936; 100.000% identity (100.000% similar) in 434 aa overlap (15-448:28-461) 10 20 30 40 bm0433 PGLSKAPVYAILIALAEILSVKDISGRKLFYVHYIDFNKRLDEWVTH ::::::::::::::::::::::::::::::::: gi|750 MAEVGEIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFNKRLDEWVTH 10 20 30 40 50 60 50 60 70 80 90 100 bm0433 ERLDLKKIQFPKKEAKTPTKNGLPGSRPGSPEREVKRKVEVVSPATPVPSETAPASVFPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 ERLDLKKIQFPKKEAKTPTKNGLPGSRPGSPEREVKRKVEVVSPATPVPSETAPASVFPQ 70 80 90 100 110 120 110 120 130 140 150 160 bm0433 NGAARRAVAAQPGRKRKSNCLGTDEDSQDSSDGIPSAPRMTGSLVSDRSHDDIVTRMKNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 NGAARRAVAAQPGRKRKSNCLGTDEDSQDSSDGIPSAPRMTGSLVSDRSHDDIVTRMKNI 130 140 150 160 170 180 170 180 190 200 210 220 bm0433 ECIELGRHRLKPWYFSPYPQELTTLPVLYLCEFCLKYGRSLKCLQRHLTKCDLRHPPGNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 ECIELGRHRLKPWYFSPYPQELTTLPVLYLCEFCLKYGRSLKCLQRHLTKCDLRHPPGNE 190 200 210 220 230 240 230 240 250 260 270 280 bm0433 IYRKGTISFFEIDGRKNKSYSQNLCLLAKCFLDHKTLYYDTDPFLFYVMTEYDCKGFHIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 IYRKGTISFFEIDGRKNKSYSQNLCLLAKCFLDHKTLYYDTDPFLFYVMTEYDCKGFHIV 250 260 270 280 290 300 290 300 310 320 330 340 bm0433 GYFSKEKESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDLGLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 GYFSKEKESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDLGLL 310 320 330 340 350 360 350 360 370 380 390 400 bm0433 SYRSYWSQTILEILMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNLINYYKGQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 SYRSYWSQTILEILMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNLINYYKGQY 370 380 390 400 410 420 410 420 430 440 bm0433 ILTLSEDIVDGHERAMLKRLLRIDSKCLHFTPKDWSKRGKW ::::::::::::::::::::::::::::::::::::::::: gi|750 ILTLSEDIVDGHERAMLKRLLRIDSKCLHFTPKDWSKRGKW 430 440 450 460 >>gi|61371562|gb|AAX43690.1| HIV-1 Tat interacting prote (462 aa) initn: 2936 init1: 2936 opt: 2936 Z-score: 3300.6 bits: 620.0 E(): 3.3e-175 Smith-Waterman score: 2936; 100.000% identity (100.000% similar) in 434 aa overlap (15-448:28-461) 10 20 30 40 bm0433 PGLSKAPVYAILIALAEILSVKDISGRKLFYVHYIDFNKRLDEWVTH ::::::::::::::::::::::::::::::::: gi|613 MAEVGEIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFNKRLDEWVTH 10 20 30 40 50 60 50 60 70 80 90 100 bm0433 ERLDLKKIQFPKKEAKTPTKNGLPGSRPGSPEREVKRKVEVVSPATPVPSETAPASVFPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 ERLDLKKIQFPKKEAKTPTKNGLPGSRPGSPEREVKRKVEVVSPATPVPSETAPASVFPQ 70 80 90 100 110 120 110 120 130 140 150 160 bm0433 NGAARRAVAAQPGRKRKSNCLGTDEDSQDSSDGIPSAPRMTGSLVSDRSHDDIVTRMKNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 NGAARRAVAAQPGRKRKSNCLGTDEDSQDSSDGIPSAPRMTGSLVSDRSHDDIVTRMKNI 130 140 150 160 170 180 170 180 190 200 210 220 bm0433 ECIELGRHRLKPWYFSPYPQELTTLPVLYLCEFCLKYGRSLKCLQRHLTKCDLRHPPGNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 ECIELGRHRLKPWYFSPYPQELTTLPVLYLCEFCLKYGRSLKCLQRHLTKCDLRHPPGNE 190 200 210 220 230 240 230 240 250 260 270 280 bm0433 IYRKGTISFFEIDGRKNKSYSQNLCLLAKCFLDHKTLYYDTDPFLFYVMTEYDCKGFHIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 IYRKGTISFFEIDGRKNKSYSQNLCLLAKCFLDHKTLYYDTDPFLFYVMTEYDCKGFHIV 250 260 270 280 290 300 290 300 310 320 330 340 bm0433 GYFSKEKESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDLGLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 GYFSKEKESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDLGLL 310 320 330 340 350 360 350 360 370 380 390 400 bm0433 SYRSYWSQTILEILMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNLINYYKGQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 SYRSYWSQTILEILMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNLINYYKGQY 370 380 390 400 410 420 410 420 430 440 bm0433 ILTLSEDIVDGHERAMLKRLLRIDSKCLHFTPKDWSKRGKW ::::::::::::::::::::::::::::::::::::::::: gi|613 ILTLSEDIVDGHERAMLKRLLRIDSKCLHFTPKDWSKRGKWL 430 440 450 460 >>gi|148701208|gb|EDL33155.1| HIV-1 tat interactive prot (457 aa) initn: 2932 init1: 2932 opt: 2932 Z-score: 3296.2 bits: 619.1 E(): 5.9e-175 Smith-Waterman score: 2932; 99.770% identity (100.000% similar) in 434 aa overlap (15-448:24-457) 10 20 30 40 50 bm0433 PGLSKAPVYAILIALAEILSVKDISGRKLFYVHYIDFNKRLDEWVTHERLD ::::::::::::::::::::::::::::::::::::: gi|148 GEIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFNKRLDEWVTHERLD 10 20 30 40 50 60 60 70 80 90 100 110 bm0433 LKKIQFPKKEAKTPTKNGLPGSRPGSPEREVKRKVEVVSPATPVPSETAPASVFPQNGAA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|148 LKKIQFPKKEAKTPTKNGLPGSRPGSPEREVKRKVEVVSPATPVPSETAPASVFPQNGSA 70 80 90 100 110 120 120 130 140 150 160 170 bm0433 RRAVAAQPGRKRKSNCLGTDEDSQDSSDGIPSAPRMTGSLVSDRSHDDIVTRMKNIECIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RRAVAAQPGRKRKSNCLGTDEDSQDSSDGIPSAPRMTGSLVSDRSHDDIVTRMKNIECIE 130 140 150 160 170 180 180 190 200 210 220 230 bm0433 LGRHRLKPWYFSPYPQELTTLPVLYLCEFCLKYGRSLKCLQRHLTKCDLRHPPGNEIYRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LGRHRLKPWYFSPYPQELTTLPVLYLCEFCLKYGRSLKCLQRHLTKCDLRHPPGNEIYRK 190 200 210 220 230 240 240 250 260 270 280 290 bm0433 GTISFFEIDGRKNKSYSQNLCLLAKCFLDHKTLYYDTDPFLFYVMTEYDCKGFHIVGYFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GTISFFEIDGRKNKSYSQNLCLLAKCFLDHKTLYYDTDPFLFYVMTEYDCKGFHIVGYFS 250 260 270 280 290 300 300 310 320 330 340 350 bm0433 KEKESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDLGLLSYRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KEKESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDLGLLSYRS 310 320 330 340 350 360 360 370 380 390 400 410 bm0433 YWSQTILEILMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNLINYYKGQYILTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YWSQTILEILMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNLINYYKGQYILTL 370 380 390 400 410 420 420 430 440 bm0433 SEDIVDGHERAMLKRLLRIDSKCLHFTPKDWSKRGKW ::::::::::::::::::::::::::::::::::::: gi|148 SEDIVDGHERAMLKRLLRIDSKCLHFTPKDWSKRGKW 430 440 450 >>gi|125858009|gb|AAI29968.1| Htatip protein [Mus muscul (460 aa) initn: 2932 init1: 2932 opt: 2932 Z-score: 3296.1 bits: 619.1 E(): 5.9e-175 Smith-Waterman score: 2932; 99.770% identity (100.000% similar) in 434 aa overlap (15-448:27-460) 10 20 30 40 bm0433 PGLSKAPVYAILIALAEILSVKDISGRKLFYVHYIDFNKRLDEWVTHE :::::::::::::::::::::::::::::::::: gi|125 AEVGEIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFNKRLDEWVTHE 10 20 30 40 50 60 50 60 70 80 90 100 bm0433 RLDLKKIQFPKKEAKTPTKNGLPGSRPGSPEREVKRKVEVVSPATPVPSETAPASVFPQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 RLDLKKIQFPKKEAKTPTKNGLPGSRPGSPEREVKRKVEVVSPATPVPSETAPASVFPQN 70 80 90 100 110 120 110 120 130 140 150 160 bm0433 GAARRAVAAQPGRKRKSNCLGTDEDSQDSSDGIPSAPRMTGSLVSDRSHDDIVTRMKNIE :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 GSARRAVAAQPGRKRKSNCLGTDEDSQDSSDGIPSAPRMTGSLVSDRSHDDIVTRMKNIE 130 140 150 160 170 180 170 180 190 200 210 220 bm0433 CIELGRHRLKPWYFSPYPQELTTLPVLYLCEFCLKYGRSLKCLQRHLTKCDLRHPPGNEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 CIELGRHRLKPWYFSPYPQELTTLPVLYLCEFCLKYGRSLKCLQRHLTKCDLRHPPGNEI 190 200 210 220 230 240 230 240 250 260 270 280 bm0433 YRKGTISFFEIDGRKNKSYSQNLCLLAKCFLDHKTLYYDTDPFLFYVMTEYDCKGFHIVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 YRKGTISFFEIDGRKNKSYSQNLCLLAKCFLDHKTLYYDTDPFLFYVMTEYDCKGFHIVG 250 260 270 280 290 300 290 300 310 320 330 340 bm0433 YFSKEKESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDLGLLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 YFSKEKESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDLGLLS 310 320 330 340 350 360 350 360 370 380 390 400 bm0433 YRSYWSQTILEILMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNLINYYKGQYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 YRSYWSQTILEILMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNLINYYKGQYI 370 380 390 400 410 420 410 420 430 440 bm0433 LTLSEDIVDGHERAMLKRLLRIDSKCLHFTPKDWSKRGKW :::::::::::::::::::::::::::::::::::::::: gi|125 LTLSEDIVDGHERAMLKRLLRIDSKCLHFTPKDWSKRGKW 430 440 450 460 >>gi|25992522|gb|AAN77142.1| tat-interactive 60 kDa prot (461 aa) initn: 2932 init1: 2932 opt: 2932 Z-score: 3296.1 bits: 619.1 E(): 5.9e-175 Smith-Waterman score: 2932; 99.770% identity (100.000% similar) in 434 aa overlap (15-448:28-461) 10 20 30 40 bm0433 PGLSKAPVYAILIALAEILSVKDISGRKLFYVHYIDFNKRLDEWVTH ::::::::::::::::::::::::::::::::: gi|259 MAEVGEIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFNKRLDEWVTH 10 20 30 40 50 60 50 60 70 80 90 100 bm0433 ERLDLKKIQFPKKEAKTPTKNGLPGSRPGSPEREVKRKVEVVSPATPVPSETAPASVFPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 ERLDLKKIQFPKKEAKTPTKNGLPGSRPGSPEREVKRKVEVVSPATPVPSETAPASVFPQ 70 80 90 100 110 120 110 120 130 140 150 160 bm0433 NGAARRAVAAQPGRKRKSNCLGTDEDSQDSSDGIPSAPRMTGSLVSDRSHDDIVTRMKNI ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 NGSARRAVAAQPGRKRKSNCLGTDEDSQDSSDGIPSAPRMTGSLVSDRSHDDIVTRMKNI 130 140 150 160 170 180 170 180 190 200 210 220 bm0433 ECIELGRHRLKPWYFSPYPQELTTLPVLYLCEFCLKYGRSLKCLQRHLTKCDLRHPPGNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 ECIELGRHRLKPWYFSPYPQELTTLPVLYLCEFCLKYGRSLKCLQRHLTKCDLRHPPGNE 190 200 210 220 230 240 230 240 250 260 270 280 bm0433 IYRKGTISFFEIDGRKNKSYSQNLCLLAKCFLDHKTLYYDTDPFLFYVMTEYDCKGFHIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 IYRKGTISFFEIDGRKNKSYSQNLCLLAKCFLDHKTLYYDTDPFLFYVMTEYDCKGFHIV 250 260 270 280 290 300 290 300 310 320 330 340 bm0433 GYFSKEKESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDLGLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 GYFSKEKESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDLGLL 310 320 330 340 350 360 350 360 370 380 390 400 bm0433 SYRSYWSQTILEILMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNLINYYKGQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 SYRSYWSQTILEILMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNLINYYKGQY 370 380 390 400 410 420 410 420 430 440 bm0433 ILTLSEDIVDGHERAMLKRLLRIDSKCLHFTPKDWSKRGKW ::::::::::::::::::::::::::::::::::::::::: gi|259 ILTLSEDIVDGHERAMLKRLLRIDSKCLHFTPKDWSKRGKW 430 440 450 460 >>gi|73983070|ref|XP_866353.1| PREDICTED: similar to HIV (494 aa) initn: 2932 init1: 2932 opt: 2932 Z-score: 3295.7 bits: 619.2 E(): 6.2e-175 Smith-Waterman score: 2932; 99.770% identity (100.000% similar) in 434 aa overlap (15-448:61-494) 10 20 30 40 bm0433 PGLSKAPVYAILIALAEILSVKDISGRKLFYVHYIDFNKRLDEW :::::::::::::::::::::::::::::: gi|739 GAALSPQGEIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFNKRLDEW 40 50 60 70 80 90 50 60 70 80 90 100 bm0433 VTHERLDLKKIQFPKKEAKTPTKNGLPGSRPGSPEREVKRKVEVVSPATPVPSETAPASV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VTHERLDLKKIQFPKKEAKTPTKNGLPGSRPGSPEREVKRKVEVVSPATPVPSETAPASV 100 110 120 130 140 150 110 120 130 140 150 160 bm0433 FPQNGAARRAVAAQPGRKRKSNCLGTDEDSQDSSDGIPSAPRMTGSLVSDRSHDDIVTRM :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 FPQNGSARRAVAAQPGRKRKSNCLGTDEDSQDSSDGIPSAPRMTGSLVSDRSHDDIVTRM 160 170 180 190 200 210 170 180 190 200 210 220 bm0433 KNIECIELGRHRLKPWYFSPYPQELTTLPVLYLCEFCLKYGRSLKCLQRHLTKCDLRHPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KNIECIELGRHRLKPWYFSPYPQELTTLPVLYLCEFCLKYGRSLKCLQRHLTKCDLRHPP 220 230 240 250 260 270 230 240 250 260 270 280 bm0433 GNEIYRKGTISFFEIDGRKNKSYSQNLCLLAKCFLDHKTLYYDTDPFLFYVMTEYDCKGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GNEIYRKGTISFFEIDGRKNKSYSQNLCLLAKCFLDHKTLYYDTDPFLFYVMTEYDCKGF 280 290 300 310 320 330 290 300 310 320 330 340 bm0433 HIVGYFSKEKESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 HIVGYFSKEKESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDL 340 350 360 370 380 390 350 360 370 380 390 400 bm0433 GLLSYRSYWSQTILEILMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNLINYYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GLLSYRSYWSQTILEILMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNLINYYK 400 410 420 430 440 450 410 420 430 440 bm0433 GQYILTLSEDIVDGHERAMLKRLLRIDSKCLHFTPKDWSKRGKW :::::::::::::::::::::::::::::::::::::::::::: gi|739 GQYILTLSEDIVDGHERAMLKRLLRIDSKCLHFTPKDWSKRGKW 460 470 480 490 >>gi|149062089|gb|EDM12512.1| HIV-1 tat interactive prot (494 aa) initn: 2932 init1: 2932 opt: 2932 Z-score: 3295.7 bits: 619.2 E(): 6.2e-175 Smith-Waterman score: 2932; 99.770% identity (100.000% similar) in 434 aa overlap (15-448:61-494) 10 20 30 40 bm0433 PGLSKAPVYAILIALAEILSVKDISGRKLFYVHYIDFNKRLDEW :::::::::::::::::::::::::::::: gi|149 GAALSPQGEIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFNKRLDEW 40 50 60 70 80 90 50 60 70 80 90 100 bm0433 VTHERLDLKKIQFPKKEAKTPTKNGLPGSRPGSPEREVKRKVEVVSPATPVPSETAPASV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VTHERLDLKKIQFPKKEAKTPTKNGLPGSRPGSPEREVKRKVEVVSPATPVPSETAPASV 100 110 120 130 140 150 110 120 130 140 150 160 bm0433 FPQNGAARRAVAAQPGRKRKSNCLGTDEDSQDSSDGIPSAPRMTGSLVSDRSHDDIVTRM :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 FPQNGSARRAVAAQPGRKRKSNCLGTDEDSQDSSDGIPSAPRMTGSLVSDRSHDDIVTRM 160 170 180 190 200 210 170 180 190 200 210 220 bm0433 KNIECIELGRHRLKPWYFSPYPQELTTLPVLYLCEFCLKYGRSLKCLQRHLTKCDLRHPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KNIECIELGRHRLKPWYFSPYPQELTTLPVLYLCEFCLKYGRSLKCLQRHLTKCDLRHPP 220 230 240 250 260 270 230 240 250 260 270 280 bm0433 GNEIYRKGTISFFEIDGRKNKSYSQNLCLLAKCFLDHKTLYYDTDPFLFYVMTEYDCKGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GNEIYRKGTISFFEIDGRKNKSYSQNLCLLAKCFLDHKTLYYDTDPFLFYVMTEYDCKGF 280 290 300 310 320 330 290 300 310 320 330 340 bm0433 HIVGYFSKEKESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HIVGYFSKEKESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDL 340 350 360 370 380 390 350 360 370 380 390 400 bm0433 GLLSYRSYWSQTILEILMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNLINYYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GLLSYRSYWSQTILEILMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNLINYYK 400 410 420 430 440 450 410 420 430 440 bm0433 GQYILTLSEDIVDGHERAMLKRLLRIDSKCLHFTPKDWSKRGKW :::::::::::::::::::::::::::::::::::::::::::: gi|149 GQYILTLSEDIVDGHERAMLKRLLRIDSKCLHFTPKDWSKRGKW 460 470 480 490 448 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Thu Aug 7 19:17:43 2008 done: Thu Aug 7 19:20:09 2008 Total Scan time: 851.480 Total Display time: 0.130 Function used was FASTA [version 34.26.5 April 26, 2007]