hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-19201065/chunk_1/iprscan-20080807-19201065.nocrc
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Query sequence: bm04335
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00298                                                  36.7    3.2e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00298    1/1      12    63 ..     1    63 []    36.7  3.2e-06

Alignments of top-scoring domains:
SM00298: domain 1 of 1, from 12 to 63: score 36.7, E = 3.2e-06
                   *->eyeivEkIldhrwekkkgeveYLVKWkGysysedtWEpeenleemLk
                        +  ++Il ++  +  g++ ++V++ +++++ d+W++ e+l     
     bm04335    12    LIA-LAEILSVK--DISGRKLFYVHYIDFNKRLDEWVTHERL----- 50   

                   kkncekkldeykkrek<-*
                      + kk++  kk++k   
     bm04335    51 ---DLKKIQFPKKEAK    63   

//