hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-19320556/chunk_1/iprscan-20080807-19320556.nocrc
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Query sequence: bm04379
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
PF00245.10.ls   Alkaline phosphatase                    528.9   5.2e-156   1
PF00245.10.fs   Alkaline phosphatase                    527.1   1.7e-155   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
PF00245.10.fs     1/1     123   486 ..     1   530 []   527.1 1.7e-155
PF00245.10.ls     1/1     123   486 ..     1   530 []   528.9 5.2e-156

Alignments of top-scoring domains:
PF00245.10.fs: domain 1 of 1, from 123 to 486: score 527.1, E = 1.7e-155
                   *->kqaqtpaknvivlsGDGmGedstitaaRtlkeqadgqevgeetefam
                      k ++++aknvi+++GDGmG +st+taaR+lk+q+++   geet+++m
     bm04379   123    KLNTNVAKNVIMFLGDGMG-VSTVTAARILKGQLHHN-PGEETRLEM 167  

                   dqlplmalsktrdsdsnVtDSaltfkilaaaTAfacgvktyngaigvDaa
                   d++p++alskt++++++V+DSa      ++aTA++cgvk+++g++gv+aa
     bm04379   168 DKFPFVALSKTYNTNAQVPDSA------GTATAYLCGVKANEGTVGVSAA 211  

                   trrrqCntteGkevgtvleyAKkaGkatGlpvGrtRTaPaekravrfvtl
                   t r+ Cntt+G+ev ++l++AK+aGk++G+                    
     bm04379   212 TERSRCNTTQGNEVTSILHWAKDAGKSVGI-------------------- 241  

                   avvscqgygietGyVTTteithATPAafgaHvvsRkwygdaDmpaeAneq
                                 VTTt+++hATP+a +aH ++R+wy+d++mp+eA++q
     bm04379   242 --------------VTTTRVNHATPSAAYAHSADRDWYSDNEMPPEALSQ 277  

                   iaddiatqliknmakrkiDVlLggGdsifeygpnqersrsivaksvtehf
                   +++dia+ql+ n   r+iDV++ggG++++                     
     bm04379   278 GCKDIAYQLMHN--IRDIDVIMGGGRKYM--------------------- 304  

                   saeaeTLdeYRkryaqyktDpdlpaahAaaPwivvWDDHEteNnwavgsA
                                y+++ktD +++ +++a+++                  
     bm04379   305 -------------YPKNKTDVEYESDEKARGT------------------ 323  

                   RtdGRtpdnddnlikefklrkAAaaagYqyvmdrrsarlleGpdlqayrk
                   R+dG       +l++ +k++k++ ++++   ++r++        l ++  
     bm04379   324 RLDGL------DLVDTWKSFKPRYKHSH-FIWNRTE--------LLTLDP 358  

                   nkygplLGLFaldtrpyrwdgpqakpdgaappvaetenprrekttPsLke
                   + +++lLGLF++++++y                   e +r + t+PsL e
     bm04379   359 HNVDYLLGLFEPGDMQY-------------------ELNRNNVTDPSLSE 389  

                   mteeAikwLkrelreSsknkWkvlAqqvpfarskGFFLmVEGsrIDhaaH
                   m+++Ai+ L        kn+             kGFFL VEG+rIDh++H
     bm04379   390 MVVVAIQIL-------RKNP-------------KGFFLLVEGGRIDHGHH 419  

                   enkavnmDaWdGdpagalsEtldfDrAvkrAlefakkakdkeTlVvlTAD
                   e+          ++ +al+E++++DrA++ A  +++    ++Tl+v+TAD
     bm04379   420 EG----------KAKQALHEAVEMDRAIGQAGSLTSS---EDTLTVVTAD 456  

                   vHstaasflgpdaranypqifglppflasvtgp<-*
                    Hs++++f+g+++r+n  +ifgl+p+l   +++   
     bm04379   457 -HSHVFTFGGYTPRGN--SIFGLAPMLSDTDKK    486  

PF00245.10.ls: domain 1 of 1, from 123 to 486: score 528.9, E = 5.2e-156
                   *->kqaqtpaknvivlsGDGmGedstitaaRtlkeqadgqevgeetefam
                      k ++++aknvi+++GDGmG +st+taaR+lk+q+++   geet+++m
     bm04379   123    KLNTNVAKNVIMFLGDGMG-VSTVTAARILKGQLHHN-PGEETRLEM 167  

                   dqlplmalsktrdsdsnVtDSaltfkilaaaTAfacgvktyngaigvDaa
                   d++p++alskt++++++V+DSa      ++aTA++cgvk+++g++gv+aa
     bm04379   168 DKFPFVALSKTYNTNAQVPDSA------GTATAYLCGVKANEGTVGVSAA 211  

                   trrrqCntteGkevgtvleyAKkaGkatGlpvGrtRTaPaekravrfvtl
                   t r+ Cntt+G+ev ++l++AK+aGk++G+                    
     bm04379   212 TERSRCNTTQGNEVTSILHWAKDAGKSVGI-------------------- 241  

                   avvscqgygietGyVTTteithATPAafgaHvvsRkwygdaDmpaeAneq
                                 VTTt+++hATP+a +aH ++R+wy+d++mp+eA++q
     bm04379   242 --------------VTTTRVNHATPSAAYAHSADRDWYSDNEMPPEALSQ 277  

                   iaddiatqliknmakrkiDVlLggGdsifeygpnqersrsivaksvtehf
                   +++dia+ql+ n   r+iDV++ggG++++                     
     bm04379   278 GCKDIAYQLMHN--IRDIDVIMGGGRKYM--------------------- 304  

                   saeaeTLdeYRkryaqyktDpdlpaahAaaPwivvWDDHEteNnwavgsA
                                y+++ktD +++ +++a+++                  
     bm04379   305 -------------YPKNKTDVEYESDEKARGT------------------ 323  

                   RtdGRtpdnddnlikefklrkAAaaagYqyvmdrrsarlleGpdlqayrk
                   R+dG       +l++ +k++k++ ++++   ++r++        l ++  
     bm04379   324 RLDGL------DLVDTWKSFKPRYKHSH-FIWNRTE--------LLTLDP 358  

                   nkygplLGLFaldtrpyrwdgpqakpdgaappvaetenprrekttPsLke
                   + +++lLGLF++++++y                   e +r + t+PsL e
     bm04379   359 HNVDYLLGLFEPGDMQY-------------------ELNRNNVTDPSLSE 389  

                   mteeAikwLkrelreSsknkWkvlAqqvpfarskGFFLmVEGsrIDhaaH
                   m+++Ai+ L        kn+             kGFFL VEG+rIDh++H
     bm04379   390 MVVVAIQIL-------RKNP-------------KGFFLLVEGGRIDHGHH 419  

                   enkavnmDaWdGdpagalsEtldfDrAvkrAlefakkakdkeTlVvlTAD
                   e+          ++ +al+E++++DrA++ A  +++    ++Tl+v+TAD
     bm04379   420 EG----------KAKQALHEAVEMDRAIGQAGSLTSS---EDTLTVVTAD 456  

                   vHstaasflgpdaranypqifglppflasvtgp<-*
                    Hs++++f+g+++r+n  +ifgl+p+l   +++   
     bm04379   457 -HSHVFTFGGYTPRGN--SIFGLAPMLSDTDKK    486  

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