hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-19320556/chunk_1/iprscan-20080807-19320556.nocrc
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Query sequence: bm04379
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
SM00098                                                 933.9   2.5e-276   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
SM00098        1/1     130   569 ..     1   541 []   933.9 2.5e-276

Alignments of top-scoring domains:
SM00098: domain 1 of 1, from 130 to 569: score 933.9, E = 2.5e-276
                   *->KNVIlFiGDGMGvStitAARilkgqalkgklgeetllafDqfptgal
                      KNVI+F+GDGMGvSt+tAARilkgq l++ +geet l++D+fp +al
     bm04379   130    KNVIMFLGDGMGVSTVTAARILKGQ-LHHNPGEETRLEMDKFPFVAL 175  

                   sTkTydpdkqVtDSAAtATAylcGvKTynGaIGVdaavsrnnCqtdhgke
                   s kTy++++qV+DSA+tATAylcGvK+++G++GV+aa+ r+ C+t++g+e
     bm04379   176 S-KTYNTNAQVPDSAGTATAYLCGVKANEGTVGVSAATERSRCNTTQGNE 224  

                   vkSvLEwAKkaGKsTGlVTTTritHATPAatyAHvasRkWyGPAndndiP
                   v+S+L wAK+aGKs+G+VTTTr++HATP+a+yAH+a+R+Wy   +dn++P
     bm04379   225 VTSILHWAKDAGKSVGIVTTTRVNHATPSAAYAHSADRDWY---SDNEMP 271  

                   aealekGgcgdIaeQLveNaPghriDVlLGGGrsyFaptgtkdpeYtiFe
                   +eal++ gc+dIa+QL+ N+  ++iDV++GGGr+y++p++ +d+eY   e
     bm04379   272 PEALSQ-GCKDIAYQLMHNI--RDIDVIMGGGRKYMYPKNKTDVEY---E 315  

                   gdegtrGtRrdGRNLieewkakkeskkagyqyVwnRteLlkLLKavgank
                    de++rGtR+dG +L++ wk++ +++ ++++  wnRteLl     ++++ 
     bm04379   316 SDEKARGTRLDGLDLVDTWKSF-KPRYKHSHFIWNRTELLT----LDPHN 360  

                   vdpLLGLFadeyvPVrWlGPkAaygGdkPagdltyeidRdDeagePSLaE
                   vd+LLGLF++                    gd++ye++R+ + ++PSL+E
     bm04379   361 VDYLLGLFEP--------------------GDMQYELNRN-NVTDPSLSE 389  

                   MTevAIrlLsknsnedkdekGFFLlVEGgRIDhahHeNdavgALhEtvaF
                   M++vAI++L kn      +kGFFLlVEGgRIDh+hHe++a++ALhE+v++
     bm04379   390 MVVVAIQILRKN------PKGFFLLVEGGRIDHGHHEGKAKQALHEAVEM 433  

                   DqAiqaAlefakkedeTLvvVTADHsHvgtfgGyslrgsdifglaPSleq
                   D+Ai++A+ +++  ++TL+vVTADHsHv+tfgGy++rg++ifglaP+   
     bm04379   434 DRAIGQAGSLTS-SEDTLTVVTADHSHVFTFGGYTPRGNSIFGLAPM--- 479  

                   vikdadrkpytvlaykngpGyvvHlaiDSRpqvFekknasngkrpnvklT
                    ++d+d+kp+t+++y+ngpGy+v                ++g+r+nv  +
     bm04379   480 -LSDTDKKPFTAILYGNGPGYKV----------------VGGERENV--S 510  

                   kaEiaspeYraqsavpldsetLDDNANAIQDaindifnfRsqiGWTThGH
                   ++++a+++Y+aqsavpl++et                            H
     bm04379   511 MVDYAHNNYQAQSAVPLRHET----------------------------H 532  

                   tGeDVaVfAyGPhaATWSYVLhlfrGvqEQTyiahvmayAlclg<-*
                   +GeDVaVf +GP+a       hl++Gv+EQ+y++hvmayA+c+g   
     bm04379   533 GGEDVAVFSKGPMA-------HLLHGVHEQNYVPHVMAYAACIG    569  

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