hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090525/iprscan-20090525-11474056/chunk_1/iprscan-20090525-11474056.nocrc
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Query sequence: bm04385
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
PF00970.14.ls Oxidoreductase FAD-binding domain         201.5    1.9e-57   1
PF00970.14.fs Oxidoreductase FAD-binding domain         199.5    7.4e-57   1
PF00175.11.ls Oxidoreductase NAD-binding domain         157.8    2.6e-44   1
PF00175.11.fs Oxidoreductase NAD-binding domain         156.0    9.4e-44   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
PF00970.14.fs   1/1      63   170 ..     1   111 []   199.5  7.4e-57
PF00970.14.ls   1/1      63   170 ..     1   111 []   201.5  1.9e-57
PF00175.11.fs   1/1     195   304 ..     1   124 []   156.0  9.4e-44
PF00175.11.ls   1/1     195   304 ..     1   124 []   157.8  2.6e-44

Alignments of top-scoring domains:
PF00970.14.fs: domain 1 of 1, from 63 to 170: score 199.5, E = 7.4e-57
                   *->katlvekeelShDtriFrfaLpspdqvlgLPpGQhvflrlpdidGkl
                       ++l +k+ +Sh+t++FrfaLp++ ++lgLP+G+h++l  + idG+l
     bm04385    63    LLRLLDKTTVSHNTKRFRFALPTAHHTLGLPVGKHIYLSTR-IDGSL 108  

                   vvRaYSPaSspddvGrleLlVKvyFknvhPkfPpGGkmSqyLfdsqlkvG
                   v+R+Y+P++s++d+G+++L++Kvy k+vhPkfP+GGkmSqyL ds lkvG
     bm04385   109 VIRPYTPVTSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYL-DS-LKVG 156  

                   dtvevkGPlGhFeY<-*
                   d+ve++GP G ++Y   
     bm04385   157 DVVEFRGPSGLLTY    170  

PF00970.14.ls: domain 1 of 1, from 63 to 170: score 201.5, E = 1.9e-57
                   *->katlvekeelShDtriFrfaLpspdqvlgLPpGQhvflrlpdidGkl
                       ++l +k+ +Sh+t++FrfaLp++ ++lgLP+G+h++l  + idG+l
     bm04385    63    LLRLLDKTTVSHNTKRFRFALPTAHHTLGLPVGKHIYLSTR-IDGSL 108  

                   vvRaYSPaSspddvGrleLlVKvyFknvhPkfPpGGkmSqyLfdsqlkvG
                   v+R+Y+P++s++d+G+++L++Kvy k+vhPkfP+GGkmSqyL ds lkvG
     bm04385   109 VIRPYTPVTSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYL-DS-LKVG 156  

                   dtvevkGPlGhFeY<-*
                   d+ve++GP G ++Y   
     bm04385   157 DVVEFRGPSGLLTY    170  

PF00175.11.fs: domain 1 of 1, from 195 to 304: score 156.0, E = 9.4e-44
                   *->lmiaGGtGiaPlysvlkalledpelegyvdgtkvvlvyGnrteddll
                       miaGGtGi+P++++++a+l+ pe     d+t++ l+++n+te+d++
     bm04385   195    GMIAGGTGITPMLQLIRAILKVPE-----DPTQCFLLFANQTEKDII 236  

                   lreEleelakkypnvfrlkvvavvssrtddgwyGrkGyVtdalleellse
                   lre leel+++ypn  r+k++ ++ + ++++w ++kG+Vt ++++e+l+ 
     bm04385   237 LREDLEELQARYPN--RFKLWFTL-DHPPKDWAYSKGFVTADMIREHLP- 282  

                   lwelidldgtdvYvCGDPppMmkavrk<-*
                       +++d+++v++CG PppM++ ++    
     bm04385   283 ----APGDDVLVLLCG-PPPMVQLACH    304  

PF00175.11.ls: domain 1 of 1, from 195 to 304: score 157.8, E = 2.6e-44
                   *->lmiaGGtGiaPlysvlkalledpelegyvdgtkvvlvyGnrteddll
                       miaGGtGi+P++++++a+l+ pe     d+t++ l+++n+te+d++
     bm04385   195    GMIAGGTGITPMLQLIRAILKVPE-----DPTQCFLLFANQTEKDII 236  

                   lreEleelakkypnvfrlkvvavvssrtddgwyGrkGyVtdalleellse
                   lre leel+++ypn  r+k++ ++ + ++++w ++kG+Vt ++++e+l+ 
     bm04385   237 LREDLEELQARYPN--RFKLWFTL-DHPPKDWAYSKGFVTADMIREHLP- 282  

                   lwelidldgtdvYvCGDPppMmkavrk<-*
                       +++d+++v++CG PppM++ ++    
     bm04385   283 ----APGDDVLVLLCG-PPPMVQLACH    304  

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