hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20090525/iprscan-20090525-11540989/chunk_1/iprscan-20090525-11540989.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: bm04457 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00274.9.fs Fructose-bisphosphate aldolase class-I 906.6 1.8e-273 1 PF00274.9.ls Fructose-bisphosphate aldolase class-I 908.5 2.8e-270 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00274.9.fs 1/1 46 395 .] 1 350 [] 906.6 1.8e-273 PF00274.9.ls 1/1 46 395 .] 1 350 [] 908.5 2.8e-270 Alignments of top-scoring domains: PF00274.9.fs: domain 1 of 1, from 46 to 395: score 906.6, E = 1.8e-273 *->ELiktAkkIvaPGKGILAaDEStgTiGKRLasIgvENtEeNRRaYRe EL+++A +IvaPGKGILAaDES+g++ KRL++IgvENtEeNRR+YR+ bm04457 46 ELSDIALRIVAPGKGILAADESVGSMAKRLSQIGVENTEENRRLYRQ 92 LLFttdpglgqyISGvILFEETLYQktddGkpFvdlLkekgIvpGIKVDk LF++d+ ++++I+GvI+F+ETLYQk+d+G+pFv +++kgIv+GIKVDk bm04457 93 VLFSADDRVKKCIGGVIFFHETLYQKDDNGVPFVRTIQDKGIVVGIKVDK 142 GvvpLagTdgEttTqGLDgLaeRCaqYYkdGArFAKWRaVlkIsakntPS GvvpLagTdgEttTqGLDgL+eRCaqY+kdGA+FAKWR+VlkIs + tPS bm04457 143 GVVPLAGTDGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIS-ERTPS 191 elaikenAnvLARYAsICQqnGLVPIVEPEiLpDGdHdlercqeVtEkVl +lai+enAnvLARYAsICQqnG+VPIVEPEiLpDGdHdl+rcq+VtEkVl bm04457 192 ALAILENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVL 241 AavYkaLadhhVlLEGtLLKPNMVtpGadckkkatpeeiAeaTVtaLrRt AavYkaL+dhhV+LEGtLLKPNMVtpG++c+ k+tpeeiA+aTVtaLrRt bm04457 242 AAVYKALSDHHVYLEGTLLKPNMVTPGHACPIKYTPEEIAMATVTALRRT 291 VPpAVPGIvFLSGGQSEeeATlNLNAmNklplpkPWaLsFSYGRALQaSv VPpAVPG++FLSGGQSEeeA+ NLNA+N++plp+PWaL+FSYGRALQaS+ bm04457 292 VPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASA 341 LkaWkGkkeNvkaAQeallkRAkaNslAqlGKYtggaege.aasesLFvk L+aW G+ +N aA e+++kRA++N+lA++GKY+g++e+++aa++sL+++ bm04457 342 LNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGgAAAQSLYIA 391 nyaY<-* n+aY bm04457 392 NHAY 395 PF00274.9.ls: domain 1 of 1, from 46 to 395: score 908.5, E = 2.8e-270 *->ELiktAkkIvaPGKGILAaDEStgTiGKRLasIgvENtEeNRRaYRe EL+++A +IvaPGKGILAaDES+g++ KRL++IgvENtEeNRR+YR+ bm04457 46 ELSDIALRIVAPGKGILAADESVGSMAKRLSQIGVENTEENRRLYRQ 92 LLFttdpglgqyISGvILFEETLYQktddGkpFvdlLkekgIvpGIKVDk LF++d+ ++++I+GvI+F+ETLYQk+d+G+pFv +++kgIv+GIKVDk bm04457 93 VLFSADDRVKKCIGGVIFFHETLYQKDDNGVPFVRTIQDKGIVVGIKVDK 142 GvvpLagTdgEttTqGLDgLaeRCaqYYkdGArFAKWRaVlkIsakntPS GvvpLagTdgEttTqGLDgL+eRCaqY+kdGA+FAKWR+VlkIs + tPS bm04457 143 GVVPLAGTDGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIS-ERTPS 191 elaikenAnvLARYAsICQqnGLVPIVEPEiLpDGdHdlercqeVtEkVl +lai+enAnvLARYAsICQqnG+VPIVEPEiLpDGdHdl+rcq+VtEkVl bm04457 192 ALAILENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVL 241 AavYkaLadhhVlLEGtLLKPNMVtpGadckkkatpeeiAeaTVtaLrRt AavYkaL+dhhV+LEGtLLKPNMVtpG++c+ k+tpeeiA+aTVtaLrRt bm04457 242 AAVYKALSDHHVYLEGTLLKPNMVTPGHACPIKYTPEEIAMATVTALRRT 291 VPpAVPGIvFLSGGQSEeeATlNLNAmNklplpkPWaLsFSYGRALQaSv VPpAVPG++FLSGGQSEeeA+ NLNA+N++plp+PWaL+FSYGRALQaS+ bm04457 292 VPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASA 341 LkaWkGkkeNvkaAQeallkRAkaNslAqlGKYtggaege.aasesLFvk L+aW G+ +N aA e+++kRA++N+lA++GKY+g++e+++aa++sL+++ bm04457 342 LNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGgAAAQSLYIA 391 nyaY<-* n+aY bm04457 392 NHAY 395 //