hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-20440252/chunk_1/iprscan-20080807-20440252.nocrc
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Query sequence: bm04613
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00171.12.fs Aldehyde dehydrogenase family                  533.1     5e-164   1
PF00171.12.ls Aldehyde dehydrogenase family                  278.7      1e-80   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00171.12.fs   1/1      43   324 ..     1   289 [.   533.1   5e-164
PF00171.12.ls   1/1      43   330 .]     1   479 []   278.7    1e-80

Alignments of top-scoring domains:
PF00171.12.fs: domain 1 of 1, from 43 to 324: score 533.1, E = 5e-164
                   *->WvdsssGsetievinPathgeviatvpaataeDvdaAvaAAraAfk.
                      W+ds sG ++++v+nPat +e++++v ++++eDvd+Av+AAr+Af+ 
     bm04613    43    WHDSVSG-KKFPVFNPAT-EEELCQVEEGDKEDVDKAVKAARQAFQi 87   

                   sGaWaktppaeRariLrkaAdlleeradeLAeletlEtGKplaeArgaev
                   +++W+ ++++eR+r+L+k+Adl+e+++  LA +e+++ GK ++ A+  + 
     bm04613    88 GSPWRTMDASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDL 137  

                   praidtlryyAglarkleGetipsdtdapggpgrlaytrRePvGVVgaIt
                   +++i tlry+Ag+a+k++G+tip+d       ++++ytr+eP+GV+g+I+
     bm04613   138 AGCIKTLRYCAGWADKIQGRTIPID------GNFFTYTRHEPIGVCGQII 181  

                   PWNFPlllaawKiAPALAaGNtVVlKPaElTPlsalllAelfeeAGlPaG
                   PWNFPl ++ wKi+PAL +GNtVV+KPaE+TPl+al +A l++eAG+P+G
     bm04613   182 PWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPLTALHVASLIKEAGFPPG 231  

                   VlNvVtGsGsevGdaLveHPdvdkvsFTGSTavGrrIaeaAalknlKrvt
                   V+N+V+G+G+++G+a+++H+d+dkv+FTGST+vG++I eaA+++nlKrvt
     bm04613   232 VVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVT 281  

                   LELGGKsPlIVfdDADLdaAvegavfgaFfnaGQvCtAgsRll<-*
                   LELGGKsP+IV++DADLd Ave a +g+F+++GQ+C+A+sR++   
     bm04613   282 LELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIF    324  

PF00171.12.ls: domain 1 of 1, from 43 to 330: score 278.7, E = 1e-80
                   *->WvdsssGsetievinPathgeviatvpaataeDvdaAvaAAraAfk.
                      W+ds sG ++++v+nPat +e++++v ++++eDvd+Av+AAr+Af+ 
     bm04613    43    WHDSVSG-KKFPVFNPAT-EEELCQVEEGDKEDVDKAVKAARQAFQi 87   

                   sGaWaktppaeRariLrkaAdlleeradeLAeletlEtGKplaeArgaev
                   +++W+ ++++eR+r+L+k+Adl+e+++  LA +e+++ GK ++ A+  + 
     bm04613    88 GSPWRTMDASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDL 137  

                   praidtlryyAglarkleGetipsdtdapggpgrlaytrRePvGVVgaIt
                   +++i tlry+Ag+a+k++G+tip+d       ++++ytr+eP+GV+g+I+
     bm04613   138 AGCIKTLRYCAGWADKIQGRTIPID------GNFFTYTRHEPIGVCGQII 181  

                   PWNFPlllaawKiAPALAaGNtVVlKPaElTPlsalllAelfeeAGlPaG
                   PWNFPl ++ wKi+PAL +GNtVV+KPaE+TPl+al +A l++eAG+P+G
     bm04613   182 PWNFPLVMLIWKIGPALSCGNTVVVKPAEQTPLTALHVASLIKEAGFPPG 231  

                   VlNvVtGsGsevGdaLveHPdvdkvsFTGSTavGrrIaeaAalknlKrvt
                   V+N+V+G+G+++G+a+++H+d+dkv+FTGST+vG++I eaA+++nlKrvt
     bm04613   232 VVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVT 281  

                   LELGGKsPlIVfdDADLdaAvegavfgaFfnaGQvCtAgsRllVhesiyD
                   LELGGKsP+IV++DADLd Ave a +g+F+++GQ+C+A+sR++       
     bm04613   282 LELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIF------- 324  

                   eFverlveaakklkvGdPlDpdtdiGPliskkqlekvlsyiedAkeeGAk
                                                                     
     bm04613     - -------------------------------------------------- -    

                   lltGGerrpeeaglekGyfvePTvladVtpdmriaqEEiFGPVlsvipFd
                     +G                                              
     bm04613   325 --CGR--------------------------------------------- 327  

                   deeEAIelANdteYGLaagVfTrDldrAlrvarrleaGtVwiNdyttgdp
                                                                     
     bm04613     - -------------------------------------------------- -    

                   eaaqPFGGfKqSGiGgREgGkegleeYtetKtV<-*
                                i                      
     bm04613   328 -------------IN-----------------L    330  

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