hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-21021512/chunk_1/iprscan-20080807-21021512.nocrc
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Query sequence: bm04652
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00360                                                 201.8    6.3e-56   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00360    1/3     191   265 ..     1   121 []    71.0  1.5e-16
SM00360    2/3     272   349 ..     1   121 []    51.5  1.1e-10
SM00360    3/3     367   432 ..     1   121 []    79.4  4.5e-19

Alignments of top-scoring domains:
SM00360: domain 1 of 3, from 191 to 265: score 71.0, E = 1.5e-16
                   *->tlfVgNLndppdvteedLrelFkevksvevfraeteskfGkvvsvri
                       +fVg +  p d  e++L  lF              +k G++ + r+
     bm04652   191    EVFVGKI--PRDLYEDELVPLF--------------EKAGPIWDLRL 221  

                   vrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAlli
                   ++d+                      +G+++G+aF++F  +e+A+ A  +
     bm04652   222 MMDPL---------------------SGQNRGYAFITFCGKEAAQEA--V 248  

                   ealnaskGkeledgGrptlglrVe<-*
                   ++ +    +e+ + G++   l V    
     bm04652   249 KLCD---SYEI-RPGKH---LGVC    265  

SM00360: domain 2 of 3, from 272 to 349: score 51.5, E = 1.1e-10
                   *->tlfVgNLndppdvteedLrelF.kevksvevfraeteskfGkvvsvr
                      +lfVg +  p++ t+e + e F+k                G +v+v 
     bm04652   272    RLFVGSI--PKNKTKENILEEFsK-------------VTEG-LVDVI 302  

                   ivrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAll
                   + + +d                    +++k++Gf+F e+ed+ +A++A+ 
     bm04652   303 LYHQPD--------------------DKKKNRGFCFLEYEDHKSAAQAR- 331  

                   iealnaskGkeledgGrptlglrVe<-*
                    +++   ++ ++   G+    ++Ve   
     bm04652   332 RRLMS--GKVKV--WGNV---VTVE    349  

SM00360: domain 3 of 3, from 367 to 432: score 79.4, E = 4.5e-19
                   *->tlfVgNLndppdvteedLrelFkevksvevfraeteskfGkvvsvri
                      +lfV+NL    +vtee L++ F              s+fGk+++v+ 
     bm04652   367    VLFVRNL--ATTVTEEILEKSF--------------SEFGKLERVKK 397  

                   vrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAlli
                   ++d                             +aFV+Fed+ +A kA  +
     bm04652   398 LKD-----------------------------YAFVHFEDRGAAVKA--M 416  

                   ealnaskGkeledgGrptlglrVe<-*
                   +++n   Gke+  +G +   +++    
     bm04652   417 DEMN---GKEI--EGEE---IEIV    432  

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