# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm04679.fasta.nr -Q bm04679.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm04679, 488 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6814323 sequences Expectation_n fit: rho(ln(x))= 6.6332+/-0.000209; mu= 6.1779+/- 0.012 mean_var=151.4774+/-28.956, 0's: 31 Z-trim: 57 B-trim: 426 in 1/67 Lambda= 0.104208 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|67460768|sp|Q5RFL9.3|NONO_PONAB Non-POU domain- ( 471) 3200 492.7 7.7e-137 gi|30584547|gb|AAP36526.1| Homo sapiens non-POU do ( 472) 3200 492.7 7.8e-137 gi|67970671|dbj|BAE01678.1| unnamed protein produc ( 471) 3197 492.2 1.1e-136 gi|348239|gb|AAC37578.1| [Human mRNA, complete cds ( 471) 3193 491.6 1.6e-136 gi|158255716|dbj|BAF83829.1| unnamed protein produ ( 471) 3188 490.9 2.7e-136 gi|74007632|ref|XP_849110.1| PREDICTED: similar to ( 470) 3181 489.8 5.6e-136 gi|86821913|gb|AAI05533.1| Non-POU domain containi ( 470) 3178 489.4 7.7e-136 gi|407308|gb|AAA03427.1| 54 kDa protein gi|280 ( 471) 3178 489.4 7.7e-136 gi|114689049|ref|XP_529034.2| PREDICTED: non-POU d ( 478) 3171 488.3 1.6e-135 gi|148682196|gb|EDL14143.1| mCG119680, isoform CRA ( 509) 3170 488.2 1.9e-135 gi|148682195|gb|EDL14142.1| mCG119680, isoform CRA ( 512) 3170 488.2 1.9e-135 gi|74141990|dbj|BAE41058.1| unnamed protein produc ( 528) 3170 488.2 1.9e-135 gi|74007642|ref|XP_858140.1| PREDICTED: similar to ( 477) 3152 485.5 1.2e-134 gi|67460966|sp|Q99K48.3|NONO_MOUSE Non-POU domain- ( 473) 3143 484.1 2.9e-134 gi|74203206|dbj|BAE26278.1| unnamed protein produc ( 475) 3139 483.5 4.5e-134 gi|67460593|sp|Q5FVM4|NONO_RAT Non-POU domain-cont ( 476) 3137 483.2 5.5e-134 gi|74145658|dbj|BAE36217.1| unnamed protein produc ( 473) 3136 483.0 6.1e-134 gi|74141807|dbj|BAE40976.1| unnamed protein produc ( 473) 3134 482.7 7.5e-134 gi|1083440|pir||A54691 octamer-binding protein Non ( 473) 3128 481.8 1.4e-133 gi|74139027|dbj|BAE38416.1| unnamed protein produc ( 473) 3127 481.7 1.6e-133 gi|73978623|ref|XP_539822.2| PREDICTED: similar to ( 470) 3122 480.9 2.6e-133 gi|126342741|ref|XP_001362404.1| PREDICTED: simila ( 484) 2839 438.4 1.7e-120 gi|53134059|emb|CAG32298.1| hypothetical protein [ ( 473) 2672 413.3 6.1e-113 gi|74007640|ref|XP_858101.1| PREDICTED: similar to ( 382) 2567 397.4 3e-108 gi|114689055|ref|XP_001137048.1| PREDICTED: non-PO ( 390) 2543 393.8 3.7e-107 gi|109131167|ref|XP_001090372.1| PREDICTED: simila ( 390) 2543 393.8 3.7e-107 gi|74007652|ref|XP_858341.1| PREDICTED: similar to ( 383) 2529 391.7 1.6e-106 gi|74007650|ref|XP_858300.1| PREDICTED: similar to ( 389) 2524 390.9 2.7e-106 gi|28175300|gb|AAH45128.1| P54nrb protein [Xenopus ( 464) 2507 388.5 1.8e-105 gi|42490832|gb|AAH66129.1| Hypothetical protein MG ( 465) 2503 387.9 2.7e-105 gi|83642781|dbj|BAE54372.1| 54 kD nuclear RNA-bind ( 463) 2498 387.1 4.5e-105 gi|149042187|gb|EDL95894.1| rCG36231, isoform CRA_ ( 444) 2497 386.9 4.9e-105 gi|148697229|gb|EDL29176.1| mCG119749, isoform CRA ( 382) 2482 384.6 2.1e-104 gi|76608136|ref|XP_870830.1| PREDICTED: hypothetic ( 357) 2335 362.5 9e-98 gi|74007648|ref|XP_858262.1| PREDICTED: similar to ( 342) 2292 356.0 7.7e-96 gi|148682197|gb|EDL14144.1| mCG119680, isoform CRA ( 477) 2172 338.1 2.6e-90 gi|114689051|ref|XP_001136334.1| PREDICTED: simila ( 414) 2028 316.4 7.8e-84 gi|73980880|ref|XP_854785.1| PREDICTED: similar to ( 337) 2015 314.4 2.6e-83 gi|28422768|gb|AAH46880.1| Non-POU domain containi ( 441) 1879 294.0 4.5e-77 gi|123785742|sp|Q4KLH4|PSPC1_RAT Paraspeckle compo ( 522) 1786 280.1 8.2e-73 gi|126327540|ref|XP_001374805.1| PREDICTED: simila ( 522) 1773 278.2 3.2e-72 gi|74762636|sp|Q8WXF1|PSPC1_HUMAN Paraspeckle comp ( 523) 1773 278.2 3.2e-72 gi|122145871|sp|Q1LZD9|PSPC1_BOVIN Paraspeckle com ( 520) 1769 277.6 4.8e-72 gi|74141372|dbj|BAE35969.1| unnamed protein produc ( 466) 1765 276.9 6.7e-72 gi|81915016|sp|Q8R326|PSPC1_MOUSE Paraspeckle comp ( 523) 1765 277.0 7.3e-72 gi|109120169|ref|XP_001088371.1| PREDICTED: simila ( 523) 1761 276.4 1.1e-71 gi|82233829|sp|Q5ZK88|PSPC1_CHICK Paraspeckle comp ( 523) 1758 275.9 1.5e-71 gi|26383339|dbj|BAB30876.2| unnamed protein produc ( 523) 1758 275.9 1.5e-71 gi|114648863|ref|XP_509555.2| PREDICTED: paraspeck ( 530) 1749 274.6 3.9e-71 gi|126330354|ref|XP_001380561.1| PREDICTED: simila ( 700) 1749 274.7 4.7e-71 >>gi|67460768|sp|Q5RFL9.3|NONO_PONAB Non-POU domain-cont (471 aa) initn: 3200 init1: 3200 opt: 3200 Z-score: 2611.8 bits: 492.7 E(): 7.7e-137 Smith-Waterman score: 3200; 100.000% identity (100.000% similar) in 471 aa overlap (18-488:1-471) 10 20 30 40 50 60 bm0467 RELGGTLLSAIEVEGAKMQSNKTFNLEKQNHTPRKHHQHHHQQQHHQQQQQQPPPPPIPA ::::::::::::::::::::::::::::::::::::::::::: gi|674 MQSNKTFNLEKQNHTPRKHHQHHHQQQHHQQQQQQPPPPPIPA 10 20 30 40 70 80 90 100 110 120 bm0467 NGQQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 NGQQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV 50 60 70 80 90 100 130 140 150 160 170 180 bm0467 FIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 FIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNEL 110 120 130 140 150 160 190 200 210 220 230 240 bm0467 LEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 LEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVT 170 180 190 200 210 220 250 260 270 280 290 300 bm0467 VEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 VEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQD 230 240 250 260 270 280 310 320 330 340 350 360 bm0467 QVDRNIKEAREKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 QVDRNIKEAREKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELR 290 300 310 320 330 340 370 380 390 400 410 420 bm0467 QEEERRRREEEMRRQQEEMMRRQQEGFKGTFPDAREQEIRMGQMAMGGAMGINNRGAMPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 QEEERRRREEEMRRQQEEMMRRQQEGFKGTFPDAREQEIRMGQMAMGGAMGINNRGAMPP 350 360 370 380 390 400 430 440 450 460 470 480 bm0467 APVPAGTPAPPGPATMMPDGTLGLTPPTTERFGQAATMEGIGAIGGTPPAFNRAAPGAEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 APVPAGTPAPPGPATMMPDGTLGLTPPTTERFGQAATMEGIGAIGGTPPAFNRAAPGAEF 410 420 430 440 450 460 bm0467 APNKRRRY :::::::: gi|674 APNKRRRY 470 >>gi|30584547|gb|AAP36526.1| Homo sapiens non-POU domain (472 aa) initn: 3200 init1: 3200 opt: 3200 Z-score: 2611.8 bits: 492.7 E(): 7.8e-137 Smith-Waterman score: 3200; 100.000% identity (100.000% similar) in 471 aa overlap (18-488:1-471) 10 20 30 40 50 60 bm0467 RELGGTLLSAIEVEGAKMQSNKTFNLEKQNHTPRKHHQHHHQQQHHQQQQQQPPPPPIPA ::::::::::::::::::::::::::::::::::::::::::: gi|305 MQSNKTFNLEKQNHTPRKHHQHHHQQQHHQQQQQQPPPPPIPA 10 20 30 40 70 80 90 100 110 120 bm0467 NGQQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 NGQQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV 50 60 70 80 90 100 130 140 150 160 170 180 bm0467 FIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 FIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNEL 110 120 130 140 150 160 190 200 210 220 230 240 bm0467 LEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 LEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVT 170 180 190 200 210 220 250 260 270 280 290 300 bm0467 VEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 VEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQD 230 240 250 260 270 280 310 320 330 340 350 360 bm0467 QVDRNIKEAREKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 QVDRNIKEAREKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELR 290 300 310 320 330 340 370 380 390 400 410 420 bm0467 QEEERRRREEEMRRQQEEMMRRQQEGFKGTFPDAREQEIRMGQMAMGGAMGINNRGAMPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 QEEERRRREEEMRRQQEEMMRRQQEGFKGTFPDAREQEIRMGQMAMGGAMGINNRGAMPP 350 360 370 380 390 400 430 440 450 460 470 480 bm0467 APVPAGTPAPPGPATMMPDGTLGLTPPTTERFGQAATMEGIGAIGGTPPAFNRAAPGAEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 APVPAGTPAPPGPATMMPDGTLGLTPPTTERFGQAATMEGIGAIGGTPPAFNRAAPGAEF 410 420 430 440 450 460 bm0467 APNKRRRY :::::::: gi|305 APNKRRRYL 470 >>gi|67970671|dbj|BAE01678.1| unnamed protein product [M (471 aa) initn: 3197 init1: 3197 opt: 3197 Z-score: 2609.4 bits: 492.2 E(): 1.1e-136 Smith-Waterman score: 3197; 99.788% identity (100.000% similar) in 471 aa overlap (18-488:1-471) 10 20 30 40 50 60 bm0467 RELGGTLLSAIEVEGAKMQSNKTFNLEKQNHTPRKHHQHHHQQQHHQQQQQQPPPPPIPA ::::::::::::::::::::::::::::::::::::::::::: gi|679 MQSNKTFNLEKQNHTPRKHHQHHHQQQHHQQQQQQPPPPPIPA 10 20 30 40 70 80 90 100 110 120 bm0467 NGQQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|679 NGQQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRRLFEKYGKAGEV 50 60 70 80 90 100 130 140 150 160 170 180 bm0467 FIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 FIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNEL 110 120 130 140 150 160 190 200 210 220 230 240 bm0467 LEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 LEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVT 170 180 190 200 210 220 250 260 270 280 290 300 bm0467 VEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 VEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQD 230 240 250 260 270 280 310 320 330 340 350 360 bm0467 QVDRNIKEAREKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 QVDRNIKEAREKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELR 290 300 310 320 330 340 370 380 390 400 410 420 bm0467 QEEERRRREEEMRRQQEEMMRRQQEGFKGTFPDAREQEIRMGQMAMGGAMGINNRGAMPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 QEEERRRREEEMRRQQEEMMRRQQEGFKGTFPDAREQEIRMGQMAMGGAMGINNRGAMPP 350 360 370 380 390 400 430 440 450 460 470 480 bm0467 APVPAGTPAPPGPATMMPDGTLGLTPPTTERFGQAATMEGIGAIGGTPPAFNRAAPGAEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 APVPAGTPAPPGPATMMPDGTLGLTPPTTERFGQAATMEGIGAIGGTPPAFNRAAPGAEF 410 420 430 440 450 460 bm0467 APNKRRRY :::::::: gi|679 APNKRRRY 470 >>gi|348239|gb|AAC37578.1| [Human mRNA, complete cds.], (471 aa) initn: 3193 init1: 3193 opt: 3193 Z-score: 2606.1 bits: 491.6 E(): 1.6e-136 Smith-Waterman score: 3193; 99.788% identity (99.788% similar) in 471 aa overlap (18-488:1-471) 10 20 30 40 50 60 bm0467 RELGGTLLSAIEVEGAKMQSNKTFNLEKQNHTPRKHHQHHHQQQHHQQQQQQPPPPPIPA ::::::::::::::::::::::::::::::::::::::::::: gi|348 MQSNKTFNLEKQNHTPRKHHQHHHQQQHHQQQQQQPPPPPIPA 10 20 30 40 70 80 90 100 110 120 bm0467 NGQQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|348 NGQQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV 50 60 70 80 90 100 130 140 150 160 170 180 bm0467 FIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNEL ::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|348 FIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLHVRNLPQYVSNEL 110 120 130 140 150 160 190 200 210 220 230 240 bm0467 LEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|348 LEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVT 170 180 190 200 210 220 250 260 270 280 290 300 bm0467 VEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|348 VEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQD 230 240 250 260 270 280 310 320 330 340 350 360 bm0467 QVDRNIKEAREKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|348 QVDRNIKEAREKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELR 290 300 310 320 330 340 370 380 390 400 410 420 bm0467 QEEERRRREEEMRRQQEEMMRRQQEGFKGTFPDAREQEIRMGQMAMGGAMGINNRGAMPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|348 QEEERRRREEEMRRQQEEMMRRQQEGFKGTFPDAREQEIRMGQMAMGGAMGINNRGAMPP 350 360 370 380 390 400 430 440 450 460 470 480 bm0467 APVPAGTPAPPGPATMMPDGTLGLTPPTTERFGQAATMEGIGAIGGTPPAFNRAAPGAEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|348 APVPAGTPAPPGPATMMPDGTLGLTPPTTERFGQAATMEGIGAIGGTPPAFNRAAPGAEF 410 420 430 440 450 460 bm0467 APNKRRRY :::::::: gi|348 APNKRRRY 470 >>gi|158255716|dbj|BAF83829.1| unnamed protein product [ (471 aa) initn: 3188 init1: 3188 opt: 3188 Z-score: 2602.1 bits: 490.9 E(): 2.7e-136 Smith-Waterman score: 3188; 99.575% identity (100.000% similar) in 471 aa overlap (18-488:1-471) 10 20 30 40 50 60 bm0467 RELGGTLLSAIEVEGAKMQSNKTFNLEKQNHTPRKHHQHHHQQQHHQQQQQQPPPPPIPA :.::::::::::::::::::::::::::::::::::::::::: gi|158 MRSNKTFNLEKQNHTPRKHHQHHHQQQHHQQQQQQPPPPPIPA 10 20 30 40 70 80 90 100 110 120 bm0467 NGQQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|158 NGQQASSQNEGLTIDLKNFRKPGEKTFTRRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV 50 60 70 80 90 100 130 140 150 160 170 180 bm0467 FIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 FIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNEL 110 120 130 140 150 160 190 200 210 220 230 240 bm0467 LEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 LEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVT 170 180 190 200 210 220 250 260 270 280 290 300 bm0467 VEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 VEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQD 230 240 250 260 270 280 310 320 330 340 350 360 bm0467 QVDRNIKEAREKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 QVDRNIKEAREKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELR 290 300 310 320 330 340 370 380 390 400 410 420 bm0467 QEEERRRREEEMRRQQEEMMRRQQEGFKGTFPDAREQEIRMGQMAMGGAMGINNRGAMPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 QEEERRRREEEMRRQQEEMMRRQQEGFKGTFPDAREQEIRMGQMAMGGAMGINNRGAMPP 350 360 370 380 390 400 430 440 450 460 470 480 bm0467 APVPAGTPAPPGPATMMPDGTLGLTPPTTERFGQAATMEGIGAIGGTPPAFNRAAPGAEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 APVPAGTPAPPGPATMMPDGTLGLTPPTTERFGQAATMEGIGAIGGTPPAFNRAAPGAEF 410 420 430 440 450 460 bm0467 APNKRRRY :::::::: gi|158 APNKRRRY 470 >>gi|74007632|ref|XP_849110.1| PREDICTED: similar to non (470 aa) initn: 3051 init1: 3051 opt: 3181 Z-score: 2596.4 bits: 489.8 E(): 5.6e-136 Smith-Waterman score: 3181; 99.788% identity (99.788% similar) in 471 aa overlap (18-488:1-470) 10 20 30 40 50 60 bm0467 RELGGTLLSAIEVEGAKMQSNKTFNLEKQNHTPRKHHQHHHQQQHHQQQQQQPPPPPIPA :::::::::::::::::::::::::: :::::::::::::::: gi|740 MQSNKTFNLEKQNHTPRKHHQHHHQQ-HHQQQQQQPPPPPIPA 10 20 30 40 70 80 90 100 110 120 bm0467 NGQQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 NGQQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV 50 60 70 80 90 100 130 140 150 160 170 180 bm0467 FIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 FIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNEL 110 120 130 140 150 160 190 200 210 220 230 240 bm0467 LEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 LEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVT 170 180 190 200 210 220 250 260 270 280 290 300 bm0467 VEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 VEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQD 230 240 250 260 270 280 310 320 330 340 350 360 bm0467 QVDRNIKEAREKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 QVDRNIKEAREKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELR 290 300 310 320 330 340 370 380 390 400 410 420 bm0467 QEEERRRREEEMRRQQEEMMRRQQEGFKGTFPDAREQEIRMGQMAMGGAMGINNRGAMPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 QEEERRRREEEMRRQQEEMMRRQQEGFKGTFPDAREQEIRMGQMAMGGAMGINNRGAMPP 350 360 370 380 390 400 430 440 450 460 470 480 bm0467 APVPAGTPAPPGPATMMPDGTLGLTPPTTERFGQAATMEGIGAIGGTPPAFNRAAPGAEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 APVPAGTPAPPGPATMMPDGTLGLTPPTTERFGQAATMEGIGAIGGTPPAFNRAAPGAEF 410 420 430 440 450 460 bm0467 APNKRRRY :::::::: gi|740 APNKRRRY 470 >>gi|86821913|gb|AAI05533.1| Non-POU domain containing, (470 aa) initn: 3048 init1: 3048 opt: 3178 Z-score: 2594.0 bits: 489.4 E(): 7.7e-136 Smith-Waterman score: 3178; 99.575% identity (99.788% similar) in 471 aa overlap (18-488:1-470) 10 20 30 40 50 60 bm0467 RELGGTLLSAIEVEGAKMQSNKTFNLEKQNHTPRKHHQHHHQQQHHQQQQQQPPPPPIPA :::::::::::::::::::::::::: :::::::::::::.:: gi|868 MQSNKTFNLEKQNHTPRKHHQHHHQQ-HHQQQQQQPPPPPMPA 10 20 30 40 70 80 90 100 110 120 bm0467 NGQQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|868 NGQQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV 50 60 70 80 90 100 130 140 150 160 170 180 bm0467 FIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|868 FIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNEL 110 120 130 140 150 160 190 200 210 220 230 240 bm0467 LEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|868 LEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVT 170 180 190 200 210 220 250 260 270 280 290 300 bm0467 VEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|868 VEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQD 230 240 250 260 270 280 310 320 330 340 350 360 bm0467 QVDRNIKEAREKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|868 QVDRNIKEAREKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELR 290 300 310 320 330 340 370 380 390 400 410 420 bm0467 QEEERRRREEEMRRQQEEMMRRQQEGFKGTFPDAREQEIRMGQMAMGGAMGINNRGAMPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|868 QEEERRRREEEMRRQQEEMMRRQQEGFKGTFPDAREQEIRMGQMAMGGAMGINNRGAMPP 350 360 370 380 390 400 430 440 450 460 470 480 bm0467 APVPAGTPAPPGPATMMPDGTLGLTPPTTERFGQAATMEGIGAIGGTPPAFNRAAPGAEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|868 APVPAGTPAPPGPATMMPDGTLGLTPPTTERFGQAATMEGIGAIGGTPPAFNRAAPGAEF 410 420 430 440 450 460 bm0467 APNKRRRY :::::::: gi|868 APNKRRRY 470 >>gi|407308|gb|AAA03427.1| 54 kDa protein gi|2808511 (471 aa) initn: 3178 init1: 3178 opt: 3178 Z-score: 2593.9 bits: 489.4 E(): 7.7e-136 Smith-Waterman score: 3178; 99.151% identity (100.000% similar) in 471 aa overlap (18-488:1-471) 10 20 30 40 50 60 bm0467 RELGGTLLSAIEVEGAKMQSNKTFNLEKQNHTPRKHHQHHHQQQHHQQQQQQPPPPPIPA ::::::::::::::::::::::::::::::::::::::::::: gi|407 MQSNKTFNLEKQNHTPRKHHQHHHQQQHHQQQQQQPPPPPIPA 10 20 30 40 70 80 90 100 110 120 bm0467 NGQQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 NGQQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV 50 60 70 80 90 100 130 140 150 160 170 180 bm0467 FIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 FIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQYVSNEL 110 120 130 140 150 160 190 200 210 220 230 240 bm0467 LEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 LEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLTTFPRPVT 170 180 190 200 210 220 250 260 270 280 290 300 bm0467 VEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 VEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQD 230 240 250 260 270 280 310 320 330 340 350 360 bm0467 QVDRNIKEAREKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 QVDRNIKEAREKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLELR 290 300 310 320 330 340 370 380 390 400 410 420 bm0467 QEEERRRREEEMRRQQEEMMRRQQEGFKGTFPDAREQEIRMGQMAMGGAMGINNRGAMPP ::::::::::::::..::::::..:::::::::::::::::::::::::::::::::::: gi|407 QEEERRRREEEMRRHEEEMMRRHEEGFKGTFPDAREQEIRMGQMAMGGAMGINNRGAMPP 350 360 370 380 390 400 430 440 450 460 470 480 bm0467 APVPAGTPAPPGPATMMPDGTLGLTPPTTERFGQAATMEGIGAIGGTPPAFNRAAPGAEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|407 APVPAGTPAPPGPATMMPDGTLGLTPPTTERFGQAATMEGIGAIGGTPPAFNRAAPGAEF 410 420 430 440 450 460 bm0467 APNKRRRY :::::::: gi|407 APNKRRRY 470 >>gi|114689049|ref|XP_529034.2| PREDICTED: non-POU domai (478 aa) initn: 2813 init1: 2813 opt: 3171 Z-score: 2588.2 bits: 488.3 E(): 1.6e-135 Smith-Waterman score: 3171; 98.326% identity (98.536% similar) in 478 aa overlap (18-488:1-478) 10 20 30 40 50 60 bm0467 RELGGTLLSAIEVEGAKMQSNKTFNLEKQNHTPRKHHQHHHQQQHHQQQQQQPPPPPIPA ::::::::::::::::::::::::::::::::::::::::::: gi|114 MQSNKTFNLEKQNHTPRKHHQHHHQQQHHQQQQQQPPPPPIPA 10 20 30 40 70 80 90 100 110 bm0467 NGQQASSQ-------NEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEK :::::::: .:::::::::::::::::::::::::::::::::::::::::::: gi|114 NGQQASSQMTVCLLSDEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEK 50 60 70 80 90 100 120 130 140 150 160 170 bm0467 YGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLP 110 120 130 140 150 160 180 190 200 210 220 230 bm0467 QYVSNELLEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QYVSNELLEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAARKALDRCSEGSFLLT 170 180 190 200 210 220 240 250 260 270 280 290 bm0467 TFPRPVTVEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TFPRPVTVEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGSFEYEYAMRWKALIE 230 240 250 260 270 280 300 310 320 330 340 350 bm0467 MEKQQQDQVDRNIKEAREKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MEKQQQDQVDRNIKEAREKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQK 290 300 310 320 330 340 360 370 380 390 400 410 bm0467 RKQLELRQEEERRRREEEMRRQQEEMMRRQQEGFKGTFPDAREQEIRMGQMAMGGAMGIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RKQLELRQEEERRRREEEMRRQQEEMMRRQQEGFKGTFPDAREQEIRMGQMAMGGAMGIN 350 360 370 380 390 400 420 430 440 450 460 470 bm0467 NRGAMPPAPVPAGTPAPPGPATMMPDGTLGLTPPTTERFGQAATMEGIGAIGGTPPAFNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 NRGAMPPAPVPAGTPAPPGPATMMPDGTLGLTPPTTERFGQAATMEGIGAIGGTPPAFNR 410 420 430 440 450 460 480 bm0467 AAPGAEFAPNKRRRY ::::::::::::::: gi|114 AAPGAEFAPNKRRRY 470 >>gi|148682196|gb|EDL14143.1| mCG119680, isoform CRA_b [ (509 aa) initn: 2993 init1: 2993 opt: 3170 Z-score: 2587.0 bits: 488.2 E(): 1.9e-135 Smith-Waterman score: 3170; 97.708% identity (98.958% similar) in 480 aa overlap (11-488:30-509) 10 20 30 40 bm0467 RELGGTLLSAIEVEGAKMQSNKTFNLEKQNHTPRKHHQHHH :.:.:.::::::.:::::::::::::::::: gi|148 AASPILRAKNCGQRSRLVRTARQTLCCVQIQVKGTKMQSNKAFNLEKQNHTPRKHHQHHH 10 20 30 40 50 60 50 60 70 80 90 bm0467 QQQHHQQQQQQP--PPPPIPANGQQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLP ::.:.:::::: :::::::::::::::::::::::::::::::::::::::::::::: gi|148 QQHHQQQQQQQQQQPPPPIPANGQQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLP 70 80 90 100 110 120 100 110 120 130 140 150 bm0467 PDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVR 130 140 150 160 170 180 160 170 180 190 200 210 bm0467 FACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FACHSASLTVRNLPQYVSNELLEEAFSVFGQVERAVVIVDDRGRPSGKGIVEFSGKPAAR 190 200 210 220 230 240 220 230 240 250 260 270 bm0467 KALDRCSEGSFLLTTFPRPVTVEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KALDRCSEGSFLLTTFPRPVTVEPMDQLDDEEGLPEKLVIKNQQFHKEREQPPRFAQPGS 250 260 270 280 290 300 280 290 300 310 320 330 bm0467 FEYEYAMRWKALIEMEKQQQDQVDRNIKEAREKLEMEMEAARHEHQVMLMRQDLMRRQEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FEYEYAMRWKALIEMEKQQQDQVDRNIKEAREKLEMEMEAARHEHQVMLMRQDLMRRQEE 310 320 330 340 350 360 340 350 360 370 380 390 bm0467 LRRMEELHNQEVQKRKQLELRQEEERRRREEEMRRQQEEMMRRQQEGFKGTFPDAREQEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LRRMEELHNQEVQKRKQLELRQEEERRRREEEMRRQQEEMMRRQQEGFKGTFPDAREQEI 370 380 390 400 410 420 400 410 420 430 440 450 bm0467 RMGQMAMGGAMGINNRGAMPPAPVPAGTPAPPGPATMMPDGTLGLTPPTTERFGQAATME ::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::: gi|148 RMGQMAMGGAMGINNRGAMPPAPVPPGTPAPPGPATMMPDGTLGLTPPTTERFGQAATME 430 440 450 460 470 480 460 470 480 bm0467 GIGAIGGTPPAFNRAAPGAEFAPNKRRRY :::::::::::::: :::::::::::::: gi|148 GIGAIGGTPPAFNRPAPGAEFAPNKRRRY 490 500 488 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Thu Aug 7 21:19:21 2008 done: Thu Aug 7 21:21:46 2008 Total Scan time: 855.550 Total Display time: 0.150 Function used was FASTA [version 34.26.5 April 26, 2007]