hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-21280167/chunk_1/iprscan-20080807-21280167.nocrc
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Query sequence: bm04690
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00051.9.fs Kringle domain                                  39.6      2e-11   2
PF00051.9.ls Kringle domain                                  22.3    1.2e-07   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00051.9.ls   1/1      48   124 ..     1    85 []    22.3  1.2e-07
PF00051.9.fs   2/2      88   107 ..    49    68 ..    32.9  2.1e-09

Alignments of top-scoring domains:
PF00051.9.ls: domain 1 of 1, from 48 to 124: score 22.3, E = 1.2e-07
                   *->CyqGnGesYRGtvstTeSGapCQaW.dsqtphrHskYtpenfpakgL
                      C+++nG+ YR        G+ C++W d+q+  + s   p    ++  
     bm04690    48    CFWDNGHLYREDQTSPAPGLRCLNWlDAQSGLA-SA--PV--SGA-- 87   

                   geGkHNYCRNPDGderGPWCYTltdprvrwE..YCsdiprC<-*
                     G+H YCRNPD d+rGPWCY+    ++  E++ C d+ rC   
     bm04690    88 --GNHSYCRNPDEDPRGPWCYV-SGEAGVPEkrPCEDL-RC    124  

PF00051.9.fs: domain 2 of 2, from 88 to 107: score 32.9, E = 2.1e-09
                   *->GkHNYCRNPDGderGPWCYT<-*
                      G+H YCRNPD d+rGPWCY+   
     bm04690    88    GNHSYCRNPDEDPRGPWCYV    107  

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