hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-21280167/chunk_1/iprscan-20080807-21280167.nocrc
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Query sequence: bm04690
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00130                                                  94.6    1.2e-23   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00130    1/1      46   126 ..     1    90 []    94.6  1.2e-23

Alignments of top-scoring domains:
SM00130: domain 1 of 1, from 46 to 126: score 94.6, E = 1.2e-23
                   *->rdCyagddnGesYRGtvstTkSGkpCQrWdsqtphlhrftpesfpea
                      + C+++  nG+ YR +    + G++C++W + ++ l +      p +
     bm04690    46    GGCFWD--NGHLYREDQTSPAPGLRCLNWLDAQSGLASA-----PVS 85   

                   gqLGlleeNYCRNPDGdsegPWCYT.tdpnvrdweyCdipqCes<-*
                   g   ++++ YCRNPD d++gPWCY++ + +v++  +C+  +C++   
     bm04690    86 G---AGNHSYCRNPDEDPRGPWCYVsGEAGVPEKRPCEDLRCPE    126  

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