hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090416/iprscan-20090416-11454009/chunk_1/iprscan-20090416-11454009.nocrc
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Query sequence: bm04834
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF03909.7.fs BSD domain                                      67.9    5.6e-19   1
PF03909.7.ls BSD domain                                      69.9    7.6e-18   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF03909.7.fs   1/1     181   246 ..     1    68 []    67.9  5.6e-19
PF03909.7.ls   1/1     181   246 ..     1    68 []    69.9  7.6e-18

Alignments of top-scoring domains:
PF03909.7.fs: domain 1 of 1, from 181 to 246: score 67.9, E = 5.6e-19
                   *->dlkpsdswdnefdldekteehiqalLkedpaLrklynelVPkkvste
                      +++p+++  ++fd+d+ +   ++ +L+ed+ L+k+++ lVPk v+ e
     bm04834   181    LRDPPAGVQFNFDFDQMYPV-ALVMLQEDELLSKMRFALVPKLVK-E 225  

                   eeFWarYFyllrkillkeeqr<-*
                   e FW++YFy++ +i+++ +     
     bm04834   226 EVFWRNYFYRVSLIKQSAQLT    246  

PF03909.7.ls: domain 1 of 1, from 181 to 246: score 69.9, E = 7.6e-18
                   *->dlkpsdswdnefdldekteehiqalLkedpaLrklynelVPkkvste
                      +++p+++  ++fd+d+ +   ++ +L+ed+ L+k+++ lVPk v+ e
     bm04834   181    LRDPPAGVQFNFDFDQMYPV-ALVMLQEDELLSKMRFALVPKLVK-E 225  

                   eeFWarYFyllrkillkeeqr<-*
                   e FW++YFy++ +i+++ +     
     bm04834   226 EVFWRNYFYRVSLIKQSAQLT    246  

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