# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm04873.fasta.nr -Q bm04873.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm04873, 341 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6822138 sequences Expectation_n fit: rho(ln(x))= 6.0442+/-0.000188; mu= 5.9780+/- 0.011 mean_var=95.2906+/-18.440, 0's: 45 Z-trim: 56 B-trim: 0 in 0/65 Lambda= 0.131386 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|117434|sp|P16220|CREB1_HUMAN cAMP response elem ( 341) 2138 415.1 8.7e-114 gi|544097|sp|Q01147|CREB1_MOUSE cAMP response elem ( 341) 2134 414.3 1.5e-113 gi|55727172|emb|CAH90342.1| hypothetical protein [ ( 341) 2133 414.2 1.7e-113 gi|149755007|ref|XP_001505170.1| PREDICTED: simila ( 341) 2130 413.6 2.5e-113 gi|117435|sp|P15337|CREB1_RAT cAMP response elemen ( 341) 2124 412.4 5.5e-113 gi|62630216|gb|AAX88961.1| unknown [Homo sapiens] ( 293) 1824 355.5 6.4e-96 gi|286|emb|CAA40347.1| CREB2 [Bos taurus] gi|2 ( 325) 1547 303.1 4.4e-80 gi|74005265|ref|XP_860593.1| PREDICTED: similar to ( 328) 1543 302.3 7.6e-80 gi|12644184|sp|P27925|CREB1_BOVIN cAMP response el ( 325) 1542 302.1 8.6e-80 gi|111120272|gb|ABH06321.1| cAMP responsive elemen ( 327) 1542 302.1 8.6e-80 gi|181039|gb|AAA35715.1| transactivator protein ( 327) 1541 301.9 9.8e-80 gi|149045987|gb|EDL98880.1| cAMP responsive elemen ( 327) 1538 301.4 1.5e-79 gi|817948|emb|CAA47953.1| c-AMP-responsive-element ( 327) 1537 301.2 1.7e-79 gi|149755009|ref|XP_001505169.1| PREDICTED: simila ( 327) 1533 300.4 2.8e-79 gi|57546152|gb|AAW51947.1| cAMP responsive element ( 327) 1532 300.2 3.2e-79 gi|18203789|gb|AAH21649.1| CAMP responsive element ( 327) 1531 300.0 3.6e-79 gi|105530|pir||A40120 cAMP-responsive enhancer-bin ( 326) 1529 299.7 4.7e-79 gi|56059|emb|CAA42619.1| delta CREB [Rattus norveg ( 327) 1529 299.7 4.7e-79 gi|31323967|gb|AAP47151.1| cAMP response element-b ( 327) 1529 299.7 4.7e-79 gi|4586434|dbj|BAA36482.1| CREB [Taeniopygia gutta ( 327) 1527 299.3 6.2e-79 gi|1134859|emb|CAA63242.1| unnamed protein product ( 287) 1520 297.9 1.4e-78 gi|148667786|gb|EDL00203.1| cAMP responsive elemen ( 318) 1520 297.9 1.5e-78 gi|126337925|ref|XP_001365747.1| PREDICTED: simila ( 327) 1514 296.8 3.4e-78 gi|74005243|ref|XP_860219.1| PREDICTED: similar to ( 248) 1512 296.4 3.6e-78 gi|45708831|gb|AAH67956.1| CAMP responsive element ( 327) 1507 295.5 8.5e-78 gi|27371249|gb|AAH41206.1| Creb1-prov protein [Xen ( 324) 1491 292.4 6.9e-77 gi|30494|emb|CAA42620.1| delta CREB [Homo sapiens] ( 327) 1489 292.1 9.1e-77 gi|117655429|gb|ABK55614.1| cAMP responsive elemen ( 324) 1450 284.7 1.5e-74 gi|27882081|gb|AAH44436.1| CAMP responsive element ( 318) 1423 279.6 5.2e-73 gi|74005255|ref|XP_860428.1| PREDICTED: similar to ( 319) 1336 263.1 4.8e-68 gi|74005249|ref|XP_849974.1| PREDICTED: similar to ( 336) 1242 245.3 1.2e-62 gi|817952|emb|CAA47957.1| c-AMP-responsive-element ( 317) 1230 243.0 5.3e-62 gi|114582952|ref|XP_001139927.1| PREDICTED: cAMP r ( 323) 1218 240.7 2.6e-61 gi|74005257|ref|XP_860463.1| PREDICTED: similar to ( 309) 1197 236.7 4e-60 gi|109088689|ref|XP_001092480.1| PREDICTED: cAMP r ( 337) 1192 235.8 8.2e-60 gi|47212557|emb|CAF94114.1| unnamed protein produc ( 284) 1184 234.2 2.1e-59 gi|9624444|gb|AAF90178.1| cyclic AMP response elem ( 231) 1181 233.6 2.6e-59 gi|109088687|ref|XP_001088981.1| PREDICTED: cAMP r ( 338) 1180 233.5 4e-59 gi|149743467|ref|XP_001491575.1| PREDICTED: simila ( 330) 1165 230.7 2.8e-58 gi|119606325|gb|EAW85919.1| cAMP responsive elemen ( 332) 1163 230.3 3.7e-58 gi|8248905|gb|AAC60616.2| cyclic AMP-responsive el ( 332) 1162 230.1 4.2e-58 gi|54072633|gb|AAV28556.1| cAMP response element m ( 327) 1161 229.9 4.7e-58 gi|148691115|gb|EDL23062.1| cAMP responsive elemen ( 329) 1161 229.9 4.7e-58 gi|149032588|gb|EDL87466.1| cAMP responsive elemen ( 336) 1161 229.9 4.8e-58 gi|114630090|ref|XP_001149282.1| PREDICTED: simila ( 348) 1156 229.0 9.6e-58 gi|55660892|emb|CAH72496.1| cAMP responsive elemen ( 333) 1151 228.0 1.8e-57 gi|114630102|ref|XP_001149349.1| PREDICTED: simila ( 348) 1150 227.8 2.1e-57 gi|149743469|ref|XP_001491602.1| PREDICTED: simila ( 299) 1147 227.2 2.8e-57 gi|114630092|ref|XP_001147722.1| PREDICTED: simila ( 349) 1144 226.7 4.6e-57 gi|114630122|ref|XP_001149407.1| PREDICTED: simila ( 293) 1138 225.5 8.9e-57 >>gi|117434|sp|P16220|CREB1_HUMAN cAMP response element- (341 aa) initn: 2138 init1: 2138 opt: 2138 Z-score: 2198.0 bits: 415.1 E(): 8.7e-114 Smith-Waterman score: 2138; 100.000% identity (100.000% similar) in 341 aa overlap (1-341:1-341) 10 20 30 40 50 60 bm0487 MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN 10 20 30 40 50 60 70 80 90 100 110 120 bm0487 GQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 GQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTD 70 80 90 100 110 120 130 140 150 160 170 180 bm0487 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG 130 140 150 160 170 180 190 200 210 220 230 240 bm0487 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV 190 200 210 220 230 240 250 260 270 280 290 300 bm0487 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC 250 260 270 280 290 300 310 320 330 340 bm0487 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD ::::::::::::::::::::::::::::::::::::::::: gi|117 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD 310 320 330 340 >>gi|544097|sp|Q01147|CREB1_MOUSE cAMP response element- (341 aa) initn: 2134 init1: 2134 opt: 2134 Z-score: 2193.9 bits: 414.3 E(): 1.5e-113 Smith-Waterman score: 2134; 99.707% identity (100.000% similar) in 341 aa overlap (1-341:1-341) 10 20 30 40 50 60 bm0487 MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|544 MTMESGADNQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN 10 20 30 40 50 60 70 80 90 100 110 120 bm0487 GQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|544 GQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTD 70 80 90 100 110 120 130 140 150 160 170 180 bm0487 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|544 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG 130 140 150 160 170 180 190 200 210 220 230 240 bm0487 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|544 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV 190 200 210 220 230 240 250 260 270 280 290 300 bm0487 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|544 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC 250 260 270 280 290 300 310 320 330 340 bm0487 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD ::::::::::::::::::::::::::::::::::::::::: gi|544 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD 310 320 330 340 >>gi|55727172|emb|CAH90342.1| hypothetical protein [Pong (341 aa) initn: 2133 init1: 2133 opt: 2133 Z-score: 2192.8 bits: 414.2 E(): 1.7e-113 Smith-Waterman score: 2133; 99.707% identity (100.000% similar) in 341 aa overlap (1-341:1-341) 10 20 30 40 50 60 bm0487 MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN 10 20 30 40 50 60 70 80 90 100 110 120 bm0487 GQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 GQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTD 70 80 90 100 110 120 130 140 150 160 170 180 bm0487 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG 130 140 150 160 170 180 190 200 210 220 230 240 bm0487 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV 190 200 210 220 230 240 250 260 270 280 290 300 bm0487 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC 250 260 270 280 290 300 310 320 330 340 bm0487 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD ::::::::::::::::::::::::::::::.:::::::::: gi|557 RRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYCHKSD 310 320 330 340 >>gi|149755007|ref|XP_001505170.1| PREDICTED: similar to (341 aa) initn: 2130 init1: 2130 opt: 2130 Z-score: 2189.8 bits: 413.6 E(): 2.5e-113 Smith-Waterman score: 2130; 99.707% identity (100.000% similar) in 341 aa overlap (1-341:1-341) 10 20 30 40 50 60 bm0487 MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN 10 20 30 40 50 60 70 80 90 100 110 120 bm0487 GQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTD 70 80 90 100 110 120 130 140 150 160 170 180 bm0487 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG 130 140 150 160 170 180 190 200 210 220 230 240 bm0487 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|149 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPATTILQYAQTTDGQQILVPSNQV 190 200 210 220 230 240 250 260 270 280 290 300 bm0487 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC 250 260 270 280 290 300 310 320 330 340 bm0487 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD ::::::::::::::::::::::::::::::::::::::::: gi|149 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD 310 320 330 340 >>gi|117435|sp|P15337|CREB1_RAT cAMP response element-bi (341 aa) initn: 2124 init1: 2124 opt: 2124 Z-score: 2183.6 bits: 412.4 E(): 5.5e-113 Smith-Waterman score: 2124; 99.120% identity (100.000% similar) in 341 aa overlap (1-341:1-341) 10 20 30 40 50 60 bm0487 MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN :::.:::.:::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|117 MTMDSGADNQQSGDAAVTEAESQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN 10 20 30 40 50 60 70 80 90 100 110 120 bm0487 GQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 GQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTD 70 80 90 100 110 120 130 140 150 160 170 180 bm0487 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG 130 140 150 160 170 180 190 200 210 220 230 240 bm0487 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV 190 200 210 220 230 240 250 260 270 280 290 300 bm0487 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC 250 260 270 280 290 300 310 320 330 340 bm0487 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD ::::::::::::::::::::::::::::::::::::::::: gi|117 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD 310 320 330 340 >>gi|62630216|gb|AAX88961.1| unknown [Homo sapiens] (293 aa) initn: 1824 init1: 1824 opt: 1824 Z-score: 1877.2 bits: 355.5 E(): 6.4e-96 Smith-Waterman score: 1824; 100.000% identity (100.000% similar) in 293 aa overlap (1-293:1-293) 10 20 30 40 50 60 bm0487 MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|626 MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN 10 20 30 40 50 60 70 80 90 100 110 120 bm0487 GQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|626 GQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTD 70 80 90 100 110 120 130 140 150 160 170 180 bm0487 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|626 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG 130 140 150 160 170 180 190 200 210 220 230 240 bm0487 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|626 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV 190 200 210 220 230 240 250 260 270 280 290 300 bm0487 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|626 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKN 250 260 270 280 290 310 320 330 340 bm0487 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD >>gi|286|emb|CAA40347.1| CREB2 [Bos taurus] gi|27805 (325 aa) initn: 1510 init1: 1510 opt: 1547 Z-score: 1592.8 bits: 303.1 E(): 4.4e-80 Smith-Waterman score: 1975; 94.985% identity (95.280% similar) in 339 aa overlap (3-341:1-325) 10 20 30 40 50 60 bm0487 MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|286 MESGAENQQSGDAAVTEAESQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN 10 20 30 40 50 70 80 90 100 110 120 bm0487 GQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTD : :::::::::::::::::::::::: ::::::::::::::::::: gi|286 GTKVQVHGVIQAAQPSVIQSPQVQTVQ--------------ISTIAESEDSQESVDSVTD 60 70 80 90 100 130 140 150 160 170 180 bm0487 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|286 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG 110 120 130 140 150 160 190 200 210 220 230 240 bm0487 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|286 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV 170 180 190 200 210 220 250 260 270 280 290 300 bm0487 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|286 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC 230 240 250 260 270 280 310 320 330 340 bm0487 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD ::::::::::::::::::::::::::::::::::::::::: gi|286 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD 290 300 310 320 >>gi|74005265|ref|XP_860593.1| PREDICTED: similar to cAM (328 aa) initn: 1510 init1: 1510 opt: 1543 Z-score: 1588.7 bits: 302.3 E(): 7.6e-80 Smith-Waterman score: 2016; 96.188% identity (96.188% similar) in 341 aa overlap (1-341:1-328) 10 20 30 40 50 60 bm0487 MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN 10 20 30 40 50 60 70 80 90 100 110 120 bm0487 GQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTD ::::::::::::::::::::::::::: :::::::::::::::::::: gi|740 GQTVQVHGVIQAAQPSVIQSPQVQTVQ-------------QISTIAESEDSQESVDSVTD 70 80 90 100 130 140 150 160 170 180 bm0487 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG 110 120 130 140 150 160 190 200 210 220 230 240 bm0487 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV 170 180 190 200 210 220 250 260 270 280 290 300 bm0487 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC 230 240 250 260 270 280 310 320 330 340 bm0487 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD ::::::::::::::::::::::::::::::::::::::::: gi|740 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD 290 300 310 320 >>gi|12644184|sp|P27925|CREB1_BOVIN cAMP response elemen (325 aa) initn: 1510 init1: 1510 opt: 1542 Z-score: 1587.7 bits: 302.1 E(): 8.6e-80 Smith-Waterman score: 1989; 95.575% identity (95.870% similar) in 339 aa overlap (3-341:1-325) 10 20 30 40 50 60 bm0487 MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|126 MESGAENQQSGDAAVTEAESQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN 10 20 30 40 50 70 80 90 100 110 120 bm0487 GQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTD ::::::::::::::::::::::::::: ::::::::::::::::::: gi|126 GQTVQVHGVIQAAQPSVIQSPQVQTVQ--------------ISTIAESEDSQESVDSVTD 60 70 80 90 100 130 140 150 160 170 180 bm0487 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG 110 120 130 140 150 160 190 200 210 220 230 240 bm0487 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV 170 180 190 200 210 220 250 260 270 280 290 300 bm0487 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC 230 240 250 260 270 280 310 320 330 340 bm0487 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD ::::::::::::::::::::::::::::::::::::::::: gi|126 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD 290 300 310 320 >>gi|111120272|gb|ABH06321.1| cAMP responsive element bi (327 aa) initn: 1510 init1: 1510 opt: 1542 Z-score: 1587.7 bits: 302.1 E(): 8.6e-80 Smith-Waterman score: 2001; 95.601% identity (95.894% similar) in 341 aa overlap (1-341:1-327) 10 20 30 40 50 60 bm0487 MTMESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|111 MTMESGAENQQSGDAAVTEAESQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPN 10 20 30 40 50 60 70 80 90 100 110 120 bm0487 GQTVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTD ::::::::::::::::::::::::::: ::::::::::::::::::: gi|111 GQTVQVHGVIQAAQPSVIQSPQVQTVQ--------------ISTIAESEDSQESVDSVTD 70 80 90 100 130 140 150 160 170 180 bm0487 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 SQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSG 110 120 130 140 150 160 190 200 210 220 230 240 bm0487 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 QYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQV 170 180 190 200 210 220 250 260 270 280 290 300 bm0487 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 VVQAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAAREC 230 240 250 260 270 280 310 320 330 340 bm0487 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD ::::::::::::::::::::::::::::::::::::::::: gi|111 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD 290 300 310 320 341 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Thu Aug 7 21:49:38 2008 done: Thu Aug 7 21:52:11 2008 Total Scan time: 775.790 Total Display time: 0.080 Function used was FASTA [version 34.26.5 April 26, 2007]