# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm04905.fasta.nr -Q bm04905.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm04905, 288 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6823071 sequences Expectation_n fit: rho(ln(x))= 4.9911+/-0.00019; mu= 11.2907+/- 0.011 mean_var=77.8222+/-15.068, 0's: 39 Z-trim: 45 B-trim: 746 in 1/65 Lambda= 0.145386 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62089236|dbj|BAD93062.1| cyclin D3 variant [Hom ( 288) 1960 420.0 2.1e-115 gi|119624481|gb|EAX04076.1| cyclin D3, isoform CRA ( 242) 1507 324.9 7.5e-87 gi|56204980|emb|CAI23490.1| cyclin D3 [Homo sapien ( 242) 1503 324.1 1.3e-86 gi|193786248|dbj|BAG51531.1| unnamed protein produ ( 242) 1502 323.8 1.5e-86 gi|109071152|ref|XP_001086274.1| PREDICTED: cyclin ( 242) 1498 323.0 2.8e-86 gi|21397158|gb|AAM51826.1|AF517525_1 cyclin D3 [Ho ( 292) 1491 321.6 8.8e-86 gi|20981685|sp|P30281|CCND3_HUMAN G1/S-specific cy ( 292) 1487 320.8 1.6e-85 gi|60654231|gb|AAX29808.1| cyclin D3 [synthetic co ( 293) 1487 320.8 1.6e-85 gi|90078112|dbj|BAE88736.1| unnamed protein produc ( 237) 1484 320.1 2.1e-85 gi|157939803|gb|ABW05542.1| cyclin D3 (predicted) ( 292) 1484 320.1 2.4e-85 gi|60822866|gb|AAX36623.1| cyclin D3 [synthetic co ( 292) 1474 318.0 1e-84 gi|115522019|gb|ABJ09399.1| cyclin D3 [Sus scrofa] ( 292) 1462 315.5 5.9e-84 gi|115312216|sp|Q3MHH5|CCND3_BOVIN G1/S-specific c ( 292) 1461 315.3 6.9e-84 gi|73972799|ref|XP_852046.1| PREDICTED: similar to ( 242) 1460 315.0 6.9e-84 gi|194223500|ref|XP_001918037.1| PREDICTED: simila ( 253) 1460 315.1 7.2e-84 gi|186886482|gb|ACC93617.1| Ccnd3 [Ovis aries] ( 292) 1454 313.9 1.9e-83 gi|184185441|gb|ACC68848.1| cyclin D3 (predicted) ( 292) 1453 313.6 2.2e-83 gi|231744|sp|P30282|CCND3_MOUSE G1/S-specific cycl ( 292) 1402 302.9 3.7e-80 gi|74197181|dbj|BAE35136.1| unnamed protein produc ( 292) 1402 302.9 3.7e-80 gi|13278570|gb|AAH04076.1| Cyclin D3 [Mus musculus ( 292) 1386 299.6 3.7e-79 gi|119624477|gb|EAX04072.1| cyclin D3, isoform CRA ( 211) 1377 297.6 1.1e-78 gi|148691626|gb|EDL23573.1| mCG15576, isoform CRA_ ( 289) 1378 297.9 1.2e-78 gi|1345742|sp|P48961|CCND3_RAT G1/S-specific cycli ( 293) 1376 297.5 1.6e-78 gi|193787061|dbj|BAG51884.1| unnamed protein produ ( 211) 1373 296.7 2e-78 gi|109071150|ref|XP_001086510.1| PREDICTED: cyclin ( 291) 1374 297.1 2.1e-78 gi|73972795|ref|XP_864857.1| PREDICTED: similar to ( 211) 1346 291.1 9.9e-77 gi|126309863|ref|XP_001370590.1| PREDICTED: simila ( 292) 1311 283.9 2e-74 gi|112280279|gb|ABI14673.1| cyclin D3 [Oryctolagus ( 214) 1259 272.8 3.1e-71 gi|180016|gb|AAA51929.1| cyclin D3 ( 186) 1135 246.8 1.9e-63 gi|148691623|gb|EDL23570.1| mCG15576, isoform CRA_ ( 237) 1061 231.3 1.1e-58 gi|53130850|emb|CAG31754.1| hypothetical protein [ ( 292) 1057 230.6 2.2e-58 gi|109071154|ref|XP_001086168.1| PREDICTED: cyclin ( 220) 1001 218.7 6.2e-55 gi|73972797|ref|XP_864879.1| PREDICTED: similar to ( 220) 981 214.5 1.1e-53 gi|149421960|ref|XP_001518484.1| PREDICTED: simila ( 276) 981 214.6 1.3e-53 gi|76779695|gb|AAI06704.1| MGC132398 protein [Xeno ( 291) 977 213.8 2.5e-53 gi|1705785|sp|P53782|CCND2_XENLA G1/S-specific cyc ( 291) 971 212.5 6e-53 gi|190576567|gb|ACE79058.1| cyclin D3 (predicted) ( 154) 967 211.5 6.7e-53 gi|1705784|sp|P49706|CCND2_CHICK G1/S-specific cyc ( 291) 970 212.3 6.9e-53 gi|148681355|gb|EDL13302.1| mCG122338 [Mus musculu ( 173) 949 207.7 1e-51 gi|47221876|emb|CAF98888.1| unnamed protein produc ( 297) 940 206.1 5.5e-51 gi|126340068|ref|XP_001365985.1| PREDICTED: simila ( 290) 934 204.8 1.3e-50 gi|126631726|gb|AAI33932.1| Zgc:162280 protein [Da ( 298) 929 203.7 2.7e-50 gi|231741|sp|P30279|CCND2_HUMAN G1/S-specific cycl ( 289) 928 203.5 3.1e-50 gi|54696554|gb|AAV38649.1| cyclin D2 [synthetic co ( 290) 928 203.5 3.1e-50 gi|62898886|dbj|BAD97297.1| cyclin D2 variant [Hom ( 289) 927 203.3 3.6e-50 gi|61365653|gb|AAX42741.1| cyclin D2 [synthetic co ( 290) 927 203.3 3.6e-50 gi|61355683|gb|AAX41165.1| cyclin D2 [synthetic co ( 289) 926 203.1 4.1e-50 gi|73997778|ref|XP_854586.1| PREDICTED: similar to ( 289) 925 202.9 4.8e-50 gi|231742|sp|P30280|CCND2_MOUSE G1/S-specific cycl ( 289) 925 202.9 4.8e-50 gi|149049359|gb|EDM01813.1| cyclin D2, isoform CRA ( 288) 921 202.1 8.5e-50 >>gi|62089236|dbj|BAD93062.1| cyclin D3 variant [Homo sa (288 aa) initn: 1960 init1: 1960 opt: 1960 Z-score: 2227.0 bits: 420.0 E(): 2.1e-115 Smith-Waterman score: 1960; 100.000% identity (100.000% similar) in 288 aa overlap (1-288:1-288) 10 20 30 40 50 60 bm0490 TLRHCRGGDWLCSDAGRGGEVQSSPRGWWLRPPPLPKGRLRRRRDRAPATPVGAPGRSPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 TLRHCRGGDWLCSDAGRGGEVQSSPRGWWLRPPPLPKGRLRRRRDRAPATPVGAPGRSPD 10 20 30 40 50 60 70 80 90 100 110 120 bm0490 EEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKL 70 80 90 100 110 120 130 140 150 160 170 180 bm0490 CIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 CIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQT 130 140 150 160 170 180 190 200 210 220 230 240 bm0490 FLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 FLALCATDYTFAMYPPSMIATGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQ 190 200 210 220 230 240 250 260 270 280 bm0490 EQIEAALRESLREAAQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL :::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EQIEAALRESLREAAQTSSSPAPKAPRGSSSQGPSQTSTPTDVTAIHL 250 260 270 280 >>gi|119624481|gb|EAX04076.1| cyclin D3, isoform CRA_d [ (242 aa) initn: 1494 init1: 1494 opt: 1507 Z-score: 1714.4 bits: 324.9 E(): 7.5e-87 Smith-Waterman score: 1507; 97.059% identity (98.319% similar) in 238 aa overlap (53-288:5-242) 30 40 50 60 70 80 bm0490 SSPRGWWLRPPPLPKGRLRRRRDRAPATPVGAPGRS--PDEEVCEEQRCEEEVFPLAMNY :. ::: :. .:::::::::::::::::: gi|119 MKSAGGSGRSLLPSPRVCEEQRCEEEVFPLAMNY 10 20 30 90 100 110 120 130 140 bm0490 LDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLV 40 50 60 70 80 90 150 160 170 180 190 200 bm0490 LGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIA 100 110 120 130 140 150 210 220 230 240 250 260 bm0490 TGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSS 160 170 180 190 200 210 270 280 bm0490 PAPKAPRGSSSQGPSQTSTPTDVTAIHL :::::::::::::::::::::::::::: gi|119 PAPKAPRGSSSQGPSQTSTPTDVTAIHL 220 230 240 >>gi|56204980|emb|CAI23490.1| cyclin D3 [Homo sapiens] (242 aa) initn: 1490 init1: 1490 opt: 1503 Z-score: 1709.9 bits: 324.1 E(): 1.3e-86 Smith-Waterman score: 1503; 96.639% identity (98.319% similar) in 238 aa overlap (53-288:5-242) 30 40 50 60 70 80 bm0490 SSPRGWWLRPPPLPKGRLRRRRDRAPATPVGAPGRS--PDEEVCEEQRCEEEVFPLAMNY :. ::: :. .:::::::::::::::::: gi|562 MKSAGGSGRSLLPSPRVCEEQRCEEEVFPLAMNY 10 20 30 90 100 110 120 130 140 bm0490 LDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 LDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLV 40 50 60 70 80 90 150 160 170 180 190 200 bm0490 LGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 LGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIA 100 110 120 130 140 150 210 220 230 240 250 260 bm0490 TGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSS ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|562 TGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREASQTSSS 160 170 180 190 200 210 270 280 bm0490 PAPKAPRGSSSQGPSQTSTPTDVTAIHL :::::::::::::::::::::::::::: gi|562 PAPKAPRGSSSQGPSQTSTPTDVTAIHL 220 230 240 >>gi|193786248|dbj|BAG51531.1| unnamed protein product [ (242 aa) initn: 1489 init1: 1489 opt: 1502 Z-score: 1708.8 bits: 323.8 E(): 1.5e-86 Smith-Waterman score: 1502; 96.639% identity (98.319% similar) in 238 aa overlap (53-288:5-242) 30 40 50 60 70 80 bm0490 SSPRGWWLRPPPLPKGRLRRRRDRAPATPVGAPGRS--PDEEVCEEQRCEEEVFPLAMNY :. ::: :. .:::::::::::::::::: gi|193 MKSAGGSGRSLLPSPRVCEEQRCEEEVFPLAMNY 10 20 30 90 100 110 120 130 140 bm0490 LDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 LDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLV 40 50 60 70 80 90 150 160 170 180 190 200 bm0490 LGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIA :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|193 LGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFVMYPPSMIA 100 110 120 130 140 150 210 220 230 240 250 260 bm0490 TGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 TGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSS 160 170 180 190 200 210 270 280 bm0490 PAPKAPRGSSSQGPSQTSTPTDVTAIHL :::::::::::::::::::::::::::: gi|193 PAPKAPRGSSSQGPSQTSTPTDVTAIHL 220 230 240 >>gi|109071152|ref|XP_001086274.1| PREDICTED: cyclin D3 (242 aa) initn: 1485 init1: 1485 opt: 1498 Z-score: 1704.2 bits: 323.0 E(): 2.8e-86 Smith-Waterman score: 1498; 96.639% identity (98.319% similar) in 238 aa overlap (53-288:5-242) 30 40 50 60 70 80 bm0490 SSPRGWWLRPPPLPKGRLRRRRDRAPATPVGAPGRS--PDEEVCEEQRCEEEVFPLAMNY :. ::: :. .:::::::::::::::::: gi|109 MKIAGGSGRSLLPSLRVCEEQRCEEEVFPLAMNY 10 20 30 90 100 110 120 130 140 bm0490 LDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LDRYLSCVPTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLV 40 50 60 70 80 90 150 160 170 180 190 200 bm0490 LGKLKWDLAAVIAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIA ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|109 LGKLKWDLAAVIAHDFLALILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIA 100 110 120 130 140 150 210 220 230 240 250 260 bm0490 TGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TGSIGAAVQGLGACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSS 160 170 180 190 200 210 270 280 bm0490 PAPKAPRGSSSQGPSQTSTPTDVTAIHL :::::::::::::::::::::::::::: gi|109 PAPKAPRGSSSQGPSQTSTPTDVTAIHL 220 230 240 >>gi|21397158|gb|AAM51826.1|AF517525_1 cyclin D3 [Homo s (292 aa) initn: 1491 init1: 1491 opt: 1491 Z-score: 1695.2 bits: 321.6 E(): 8.8e-86 Smith-Waterman score: 1491; 100.000% identity (100.000% similar) in 227 aa overlap (62-288:66-292) 40 50 60 70 80 90 bm0490 PPPLPKGRLRRRRDRAPATPVGAPGRSPDEEVCEEQRCEEEVFPLAMNYLDRYLSCVPTR :::::::::::::::::::::::::::::: gi|213 ERYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTR 40 50 60 70 80 90 100 110 120 130 140 150 bm0490 KAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|213 KAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAV 100 110 120 130 140 150 160 170 180 190 200 210 bm0490 IAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|213 IAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGL 160 170 180 190 200 210 220 230 240 250 260 270 bm0490 GACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|213 GACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSS 220 230 240 250 260 270 280 bm0490 QGPSQTSTPTDVTAIHL ::::::::::::::::: gi|213 QGPSQTSTPTDVTAIHL 280 290 >>gi|20981685|sp|P30281|CCND3_HUMAN G1/S-specific cyclin (292 aa) initn: 1487 init1: 1487 opt: 1487 Z-score: 1690.7 bits: 320.8 E(): 1.6e-85 Smith-Waterman score: 1487; 99.559% identity (100.000% similar) in 227 aa overlap (62-288:66-292) 40 50 60 70 80 90 bm0490 PPPLPKGRLRRRRDRAPATPVGAPGRSPDEEVCEEQRCEEEVFPLAMNYLDRYLSCVPTR :::::::::::::::::::::::::::::: gi|209 ERYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTR 40 50 60 70 80 90 100 110 120 130 140 150 bm0490 KAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 KAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAV 100 110 120 130 140 150 160 170 180 190 200 210 bm0490 IAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 IAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGL 160 170 180 190 200 210 220 230 240 250 260 270 bm0490 GACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSS :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|209 GACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREASQTSSSPAPKAPRGSSS 220 230 240 250 260 270 280 bm0490 QGPSQTSTPTDVTAIHL ::::::::::::::::: gi|209 QGPSQTSTPTDVTAIHL 280 290 >>gi|60654231|gb|AAX29808.1| cyclin D3 [synthetic constr (293 aa) initn: 1487 init1: 1487 opt: 1487 Z-score: 1690.7 bits: 320.8 E(): 1.6e-85 Smith-Waterman score: 1487; 99.559% identity (100.000% similar) in 227 aa overlap (62-288:66-292) 40 50 60 70 80 90 bm0490 PPPLPKGRLRRRRDRAPATPVGAPGRSPDEEVCEEQRCEEEVFPLAMNYLDRYLSCVPTR :::::::::::::::::::::::::::::: gi|606 ERYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTR 40 50 60 70 80 90 100 110 120 130 140 150 bm0490 KAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 KAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAV 100 110 120 130 140 150 160 170 180 190 200 210 bm0490 IAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 IAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGL 160 170 180 190 200 210 220 230 240 250 260 270 bm0490 GACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSS :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|606 GACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREASQTSSSPAPKAPRGSSS 220 230 240 250 260 270 280 bm0490 QGPSQTSTPTDVTAIHL ::::::::::::::::: gi|606 QGPSQTSTPTDVTAIHLL 280 290 >>gi|90078112|dbj|BAE88736.1| unnamed protein product [M (237 aa) initn: 1484 init1: 1484 opt: 1484 Z-score: 1688.5 bits: 320.1 E(): 2.1e-85 Smith-Waterman score: 1484; 99.559% identity (100.000% similar) in 227 aa overlap (62-288:11-237) 40 50 60 70 80 90 bm0490 PPPLPKGRLRRRRDRAPATPVGAPGRSPDEEVCEEQRCEEEVFPLAMNYLDRYLSCVPTR :::::::::::::::::::::::::::::: gi|900 MRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTR 10 20 30 40 100 110 120 130 140 150 bm0490 KAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 KAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAV 50 60 70 80 90 100 160 170 180 190 200 210 bm0490 IAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGL :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 IAHDFLALILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGL 110 120 130 140 150 160 220 230 240 250 260 270 bm0490 GACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 GACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSS 170 180 190 200 210 220 280 bm0490 QGPSQTSTPTDVTAIHL ::::::::::::::::: gi|900 QGPSQTSTPTDVTAIHL 230 >>gi|157939803|gb|ABW05542.1| cyclin D3 (predicted) [Pap (292 aa) initn: 1484 init1: 1484 opt: 1484 Z-score: 1687.3 bits: 320.1 E(): 2.4e-85 Smith-Waterman score: 1484; 99.559% identity (100.000% similar) in 227 aa overlap (62-288:66-292) 40 50 60 70 80 90 bm0490 PPPLPKGRLRRRRDRAPATPVGAPGRSPDEEVCEEQRCEEEVFPLAMNYLDRYLSCVPTR :::::::::::::::::::::::::::::: gi|157 ERYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTR 40 50 60 70 80 90 100 110 120 130 140 150 bm0490 KAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 KAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAV 100 110 120 130 140 150 160 170 180 190 200 210 bm0490 IAHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGL :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 IAHDFLALILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGL 160 170 180 190 200 210 220 230 240 250 260 270 bm0490 GACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 GACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSS 220 230 240 250 260 270 280 bm0490 QGPSQTSTPTDVTAIHL ::::::::::::::::: gi|157 QGPSQTSTPTDVTAIHL 280 290 288 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Thu Aug 7 21:56:09 2008 done: Thu Aug 7 21:58:48 2008 Total Scan time: 728.410 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]