hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-22045412/chunk_1/iprscan-20080807-22045412.nocrc
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Query sequence: bm04918
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00093                                                 414.4   6.2e-120   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00093    1/1     166   513 ..     1   372 []   414.4 6.2e-120

Alignments of top-scoring domains:
SM00093: domain 1 of 1, from 166 to 513: score 414.4, E = 6.2e-120
                   *->fdLykqLakesp..kNiffSPvSIssALamlsLGAkGsTatQilevL
                      ++Ly++++++++ ++N+ fSP+SI+s L+++ LGA+ +T+t++  +L
     bm04918   166    LKLYHAFSAMKKveTNMAFSPFSIASLLTQVLLGAGENTKTNLESIL 212  

                   gFnlteltseasddiHqgFqhLlselnkpdpneqleLktaNaLFvdkslk
                   +++++  t     ++Hq+++ +++  +++          ++ +F++ +l 
     bm04918   213 SYPKDF-T-----CVHQALKGFTTKGVTS----------VSQIFHSPDLA 246  

                   lleeFledvkklYgaEvqsvdFsdpaeeAkkqINdwVekqTqGKIkdLls
                   ++++F+ ++++lY +  +++ +s+++++ +++IN wV+k+T++KI +Ll+
     bm04918   247 IRDTFVNASRTLYSS--SPRVLSNNSDANLELINTWVAKNTNNKISRLLD 294  

                   egsld.dTrlvLVNaIyFKGkWkkpFdpenTreedFhvdetttVkVpMMs
                   +  l +dTrlvL+NaIy  +kWk+ Fdp++Tr e+Fh  + +++kVpMM+
     bm04918   295 S--LPsDTRLVLLNAIYLSAKWKTTFDPKKTRMEPFHFKN-SVIKVPMMN 341  

                   qtgmkfnyghdeelscqvleLPYkGdnaSmliiLPdeveDsggLeqlEka
                   +++++  ++ d++l+++v +L++++ n+S++i++P+  +  + Le  E+a
     bm04918   342 SKKYPVAHFIDQTLKAKVGQLQLSH-NLSLVILVPQNLK--HRLEDMEQA 388  

                   LtpetlkkWtk.lsltkrksveLyLPKFkleiSgsydLkddvLekLGitd
                   L+p ++k ++++l+++k +++ L+LP++k+++  s d+ + ++ekL   d
     bm04918   389 LSPSVFKAIMEkLEMSKFQPTLLTLPRIKVTT--SQDMLS-IMEKLEFFD 435  

                   lFspskADLSgisedasedLkvSkvvHKAflEVnEeGtEAaAaTgviavp
                     +  + +L+g++ed  +dL+vS ++H+++lE++E+G+EAaAa+++ +++
     bm04918   436 FSY--DLNLCGLTED--PDLQVSAMQHQTVLELTETGVEAAAASAISVAR 481  

                   r...fkanrPFLFlIrdnkTgsiLFmGkVvnP<-*
                   +   f + +PFLF+++d++++++ FmG+V++P   
     bm04918   482 TllvFEVQQPFLFMLWDQQHKFPVFMGRVYDP    513  

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