# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm04925.fasta.nr -Q bm04925.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm04925, 296 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6824373 sequences Expectation_n fit: rho(ln(x))= 5.2785+/-0.000183; mu= 8.9510+/- 0.010 mean_var=73.6081+/-14.497, 0's: 43 Z-trim: 49 B-trim: 2929 in 1/65 Lambda= 0.149490 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|55976618|sp|Q9UBW8.1|CSN7A_HUMAN COP9 signaloso ( 275) 1730 381.9 5.9e-104 gi|7022499|dbj|BAA91620.1| unnamed protein product ( 275) 1725 380.8 1.3e-103 gi|73997739|ref|XP_543849.2| PREDICTED: similar to ( 275) 1725 380.8 1.3e-103 gi|6120135|gb|AAF04307.1|AF193844_1 COP9 complex s ( 275) 1724 380.6 1.5e-103 gi|109095298|ref|XP_001108537.1| PREDICTED: COP9 c ( 275) 1722 380.2 2e-103 gi|149049450|gb|EDM01904.1| COP9 (constitutive pho ( 275) 1711 377.8 1e-102 gi|55976587|sp|Q9CZ04|CSN7A_MOUSE COP9 signalosome ( 275) 1709 377.4 1.4e-102 gi|126339991|ref|XP_001365163.1| PREDICTED: simila ( 275) 1698 375.0 7.1e-102 gi|149712634|ref|XP_001496931.1| PREDICTED: simila ( 276) 1664 367.7 1.1e-99 gi|148667367|gb|EDK99783.1| COP9 (constitutive pho ( 318) 1657 366.2 3.7e-99 gi|109095306|ref|XP_001108422.1| PREDICTED: COP9 c ( 263) 1643 363.1 2.5e-98 gi|12850341|dbj|BAB28682.1| unnamed protein produc ( 277) 1625 359.3 3.9e-97 gi|12859161|dbj|BAB31554.1| unnamed protein produc ( 277) 1624 359.1 4.5e-97 gi|53133726|emb|CAG32192.1| hypothetical protein [ ( 275) 1562 345.7 4.8e-93 gi|62204486|gb|AAH93015.1| COPS7A protein [Homo sa ( 248) 1469 325.6 4.8e-87 gi|109095308|ref|XP_001108361.1| PREDICTED: COP9 c ( 248) 1461 323.9 1.6e-86 gi|110331897|gb|ABG67054.1| COP9 complex subunit 7 ( 225) 1397 310.0 2.1e-82 gi|110331811|gb|ABG67011.1| COP9 complex subunit 7 ( 225) 1386 307.7 1.1e-81 gi|12846376|dbj|BAB27144.1| unnamed protein produc ( 229) 1337 297.1 1.7e-78 gi|149434960|ref|XP_001518093.1| PREDICTED: simila ( 661) 1339 297.9 2.9e-78 gi|114643097|ref|XP_001162694.1| PREDICTED: COP9 c ( 262) 1333 296.3 3.4e-78 gi|95102032|dbj|BAE94260.1| ZH11 [Rattus norvegicu ( 229) 1325 294.5 1e-77 gi|109095310|ref|XP_001108483.1| PREDICTED: COP9 c ( 268) 1325 294.6 1.1e-77 gi|157279357|gb|AAI53239.1| COPS7A protein [Bos ta ( 240) 1262 281.0 1.3e-73 gi|71679865|gb|AAI00202.1| MGC114836 protein [Xeno ( 264) 1030 230.9 1.6e-58 gi|118095174|ref|XP_422740.2| PREDICTED: similar t ( 264) 1026 230.1 2.9e-58 gi|51703898|gb|AAH81067.1| MGC81975 protein [Xenop ( 264) 1023 229.4 4.6e-58 gi|126314609|ref|XP_001362958.1| PREDICTED: simila ( 264) 1016 227.9 1.3e-57 gi|149016354|gb|EDL75600.1| COP9 (constitutive pho ( 264) 1012 227.1 2.4e-57 gi|149016355|gb|EDL75601.1| COP9 (constitutive pho ( 322) 1012 227.1 2.8e-57 gi|15215085|gb|AAH12659.1| Cops7b protein [Mus mus ( 264) 1006 225.8 5.8e-57 gi|55976515|sp|Q8BV13|CSN7B_MOUSE COP9 signalosome ( 264) 1004 225.3 7.8e-57 gi|74206679|dbj|BAE41591.1| unnamed protein produc ( 264) 1002 224.9 1.1e-56 gi|109101441|ref|XP_001113929.1| PREDICTED: simila ( 264) 997 223.8 2.2e-56 gi|3309176|gb|AAC33904.1| COP9 complex subunit 7b ( 264) 996 223.6 2.6e-56 gi|122135967|sp|Q2KI56|CSN7B_BOVIN COP9 signalosom ( 264) 995 223.4 3e-56 gi|149711616|ref|XP_001498559.1| PREDICTED: simila ( 264) 994 223.2 3.5e-56 gi|55976598|sp|Q9H9Q2|CSN7B_HUMAN COP9 signalosome ( 264) 994 223.2 3.5e-56 gi|109101437|ref|XP_001113901.1| PREDICTED: simila ( 308) 990 222.4 7.2e-56 gi|37589772|gb|AAH59697.1| Cops7a protein [Danio r ( 293) 989 222.1 8e-56 gi|114583851|ref|XP_001145635.1| PREDICTED: hypoth ( 308) 987 221.7 1.1e-55 gi|94732345|emb|CAK04179.1| COP9 constitutive phot ( 293) 986 221.5 1.3e-55 gi|62897317|dbj|BAD96599.1| COP9 constitutive phot ( 264) 979 219.9 3.3e-55 gi|47221554|emb|CAF97819.1| unnamed protein produc ( 268) 976 219.3 5.2e-55 gi|194037864|ref|XP_001925656.1| PREDICTED: simila ( 259) 948 213.3 3.3e-53 gi|189529800|ref|XP_697089.3| PREDICTED: COP9 cons ( 266) 902 203.3 3.3e-50 gi|72008467|ref|XP_785591.1| PREDICTED: similar to ( 270) 900 202.9 4.5e-50 gi|76779768|gb|AAI06399.1| MGC131019 protein [Xeno ( 216) 875 197.5 1.6e-48 gi|109101439|ref|XP_001113954.1| PREDICTED: simila ( 278) 867 195.8 6.4e-48 gi|114583857|ref|XP_001145718.1| PREDICTED: COP9 c ( 278) 864 195.2 1e-47 >>gi|55976618|sp|Q9UBW8.1|CSN7A_HUMAN COP9 signalosome c (275 aa) initn: 1730 init1: 1730 opt: 1730 Z-score: 2021.4 bits: 381.9 E(): 5.9e-104 Smith-Waterman score: 1730; 100.000% identity (100.000% similar) in 275 aa overlap (22-296:1-275) 10 20 30 40 50 60 bm0492 GRGRSHVSGHPEPKSPTLSAVMSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPG ::::::::::::::::::::::::::::::::::::::: gi|559 MSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPG 10 20 30 70 80 90 100 110 120 bm0492 VYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 VYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHL 40 50 60 70 80 90 130 140 150 160 170 180 bm0492 SVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 SVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIG 100 110 120 130 140 150 190 200 210 220 230 240 bm0492 RDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 RDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKT 160 170 180 190 200 210 250 260 270 280 290 bm0492 IKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 IKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKSN 220 230 240 250 260 270 >>gi|7022499|dbj|BAA91620.1| unnamed protein product [Ho (275 aa) initn: 1725 init1: 1725 opt: 1725 Z-score: 2015.6 bits: 380.8 E(): 1.3e-103 Smith-Waterman score: 1725; 99.636% identity (100.000% similar) in 275 aa overlap (22-296:1-275) 10 20 30 40 50 60 bm0492 GRGRSHVSGHPEPKSPTLSAVMSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPG ::::::::::::::::::::::::::::::::::::::: gi|702 MSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPG 10 20 30 70 80 90 100 110 120 bm0492 VYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|702 VYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHL 40 50 60 70 80 90 130 140 150 160 170 180 bm0492 SVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|702 SVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIG 100 110 120 130 140 150 190 200 210 220 230 240 bm0492 RDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKT ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|702 RDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKET 160 170 180 190 200 210 250 260 270 280 290 bm0492 IKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|702 IKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKSN 220 230 240 250 260 270 >>gi|73997739|ref|XP_543849.2| PREDICTED: similar to COP (275 aa) initn: 1725 init1: 1725 opt: 1725 Z-score: 2015.6 bits: 380.8 E(): 1.3e-103 Smith-Waterman score: 1725; 99.636% identity (100.000% similar) in 275 aa overlap (22-296:1-275) 10 20 30 40 50 60 bm0492 GRGRSHVSGHPEPKSPTLSAVMSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPG ::::::::::::::::::::::::::::::::::::::: gi|739 MSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPG 10 20 30 70 80 90 100 110 120 bm0492 VYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHL 40 50 60 70 80 90 130 140 150 160 170 180 bm0492 SVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIG 100 110 120 130 140 150 190 200 210 220 230 240 bm0492 RDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKT :::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RDIQRQDLSAITRTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKT 160 170 180 190 200 210 250 260 270 280 290 bm0492 IKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 IKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKSN 220 230 240 250 260 270 >>gi|6120135|gb|AAF04307.1|AF193844_1 COP9 complex subun (275 aa) initn: 1724 init1: 1724 opt: 1724 Z-score: 2014.4 bits: 380.6 E(): 1.5e-103 Smith-Waterman score: 1724; 99.636% identity (100.000% similar) in 275 aa overlap (22-296:1-275) 10 20 30 40 50 60 bm0492 GRGRSHVSGHPEPKSPTLSAVMSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPG ::::::::::::::::::::::::::::::::::::::: gi|612 MSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPG 10 20 30 70 80 90 100 110 120 bm0492 VYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 VYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHL 40 50 60 70 80 90 130 140 150 160 170 180 bm0492 SVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 SVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIG 100 110 120 130 140 150 190 200 210 220 230 240 bm0492 RDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 RDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKT 160 170 180 190 200 210 250 260 270 280 290 bm0492 IKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKSN :::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|612 IKVTTAAAAAATSQDPEQHLTELREPAPGTNQRHPSKKASKGKGLRGSAKIWSKSN 220 230 240 250 260 270 >>gi|109095298|ref|XP_001108537.1| PREDICTED: COP9 const (275 aa) initn: 1722 init1: 1722 opt: 1722 Z-score: 2012.1 bits: 380.2 E(): 2e-103 Smith-Waterman score: 1722; 99.273% identity (100.000% similar) in 275 aa overlap (22-296:1-275) 10 20 30 40 50 60 bm0492 GRGRSHVSGHPEPKSPTLSAVMSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPG ::::::::::::::::::::::::::::::::::::::: gi|109 MSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPG 10 20 30 70 80 90 100 110 120 bm0492 VYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHL 40 50 60 70 80 90 130 140 150 160 170 180 bm0492 SVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIG :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|109 SVVTLAAKVKCIPYAVLLESLALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIG 100 110 120 130 140 150 190 200 210 220 230 240 bm0492 RDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKT ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RDIQRQDLNAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKT 160 170 180 190 200 210 250 260 270 280 290 bm0492 IKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKSN 220 230 240 250 260 270 >>gi|149049450|gb|EDM01904.1| COP9 (constitutive photomo (275 aa) initn: 1711 init1: 1711 opt: 1711 Z-score: 1999.3 bits: 377.8 E(): 1e-102 Smith-Waterman score: 1711; 98.909% identity (99.636% similar) in 275 aa overlap (22-296:1-275) 10 20 30 40 50 60 bm0492 GRGRSHVSGHPEPKSPTLSAVMSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPG ::::::::::::::::::::::::::::::::::::::: gi|149 MSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPG 10 20 30 70 80 90 100 110 120 bm0492 VYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHL :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|149 VYVFGELLDMPNVRELADSDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHL 40 50 60 70 80 90 130 140 150 160 170 180 bm0492 SVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIG 100 110 120 130 140 150 190 200 210 220 230 240 bm0492 RDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKT ::::::::::::.:::::::::::::::::::::::: :::::::::::::::::::::: gi|149 RDIQRQDLSAIAQTLQEWCVGCEVVLSGIEEQVSRANLHKEQQLGLKQQIESEVANLKKT 160 170 180 190 200 210 250 260 270 280 290 bm0492 IKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKSN 220 230 240 250 260 270 >>gi|55976587|sp|Q9CZ04|CSN7A_MOUSE COP9 signalosome com (275 aa) initn: 1709 init1: 1709 opt: 1709 Z-score: 1997.0 bits: 377.4 E(): 1.4e-102 Smith-Waterman score: 1709; 98.909% identity (99.636% similar) in 275 aa overlap (22-296:1-275) 10 20 30 40 50 60 bm0492 GRGRSHVSGHPEPKSPTLSAVMSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPG ::::::::::::::::::::::::::::::::::::::: gi|559 MSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPG 10 20 30 70 80 90 100 110 120 bm0492 VYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHL ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|559 VYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTDAQKNKLRHL 40 50 60 70 80 90 130 140 150 160 170 180 bm0492 SVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 SVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIG 100 110 120 130 140 150 190 200 210 220 230 240 bm0492 RDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKT ::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|559 RDIQRQDLSAIAQTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKT 160 170 180 190 200 210 250 260 270 280 290 bm0492 IKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKSN ::::::::::::::::::::::::::: :::::::::::::::::::::::::::: gi|559 IKVTTAAAAAATSQDPEQHLTELREPASGTNQRQPSKKASKGKGLRGSAKIWSKSN 220 230 240 250 260 270 >>gi|126339991|ref|XP_001365163.1| PREDICTED: similar to (275 aa) initn: 1698 init1: 1698 opt: 1698 Z-score: 1984.1 bits: 375.0 E(): 7.1e-102 Smith-Waterman score: 1698; 97.818% identity (99.636% similar) in 275 aa overlap (22-296:1-275) 10 20 30 40 50 60 bm0492 GRGRSHVSGHPEPKSPTLSAVMSAEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPG ::.:::::::::::::::::::::::::::::::::::: gi|126 MSSEVKVTGQNQEQFLLLAKSAKGAALATLIHQVLEAPG 10 20 30 70 80 90 100 110 120 bm0492 VYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHL :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|126 VYVFGELLDMPNVRELAESDFAPTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRHL 40 50 60 70 80 90 130 140 150 160 170 180 bm0492 SVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 SVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSIG 100 110 120 130 140 150 190 200 210 220 230 240 bm0492 RDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKT :::::::::.::.::::::.:::::::::::::::::::::::::::::::::::::::: gi|126 RDIQRQDLSSIAQTLQEWCMGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKKT 160 170 180 190 200 210 250 260 270 280 290 bm0492 IKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKSN ::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|126 IKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASKGKGLRSSAKIWSKSN 220 230 240 250 260 270 >>gi|149712634|ref|XP_001496931.1| PREDICTED: similar to (276 aa) initn: 1661 init1: 1661 opt: 1664 Z-score: 1944.5 bits: 367.7 E(): 1.1e-99 Smith-Waterman score: 1664; 96.739% identity (98.551% similar) in 276 aa overlap (22-296:1-276) 10 20 30 40 50 bm0492 GRGRSHVSGHPEPKSPTLSAVMSAEVKVT-GQNQEQFLLLAKSAKGAALATLIHQVLEAP :::: . ....:::::::::::::::::::::::::: gi|149 MSAEGEGDKARSKEQFLLLAKSAKGAALATLIHQVLEAP 10 20 30 60 70 80 90 100 110 bm0492 GVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLAEARNLPPLTEAQKNKLRH 40 50 60 70 80 90 120 130 140 150 160 170 bm0492 LSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADVLRGSLDQRNQRLEVDYSI 100 110 120 130 140 150 180 190 200 210 220 230 bm0492 GRDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GRDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKEQQLGLKQQIESEVANLKK 160 170 180 190 200 210 240 250 260 270 280 290 bm0492 TIKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKSN ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TIKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASKGKGLRGSAKIWSKSN 220 230 240 250 260 270 >>gi|148667367|gb|EDK99783.1| COP9 (constitutive photomo (318 aa) initn: 1657 init1: 1657 opt: 1657 Z-score: 1935.5 bits: 366.2 E(): 3.7e-99 Smith-Waterman score: 1657; 96.703% identity (98.901% similar) in 273 aa overlap (12-284:32-304) 10 20 30 40 bm0492 GRGRSHVSGHPEPKSPTLSAVMSAEVKVTGQNQEQFLLLAK : ..: :.:.:::::::::::::::::::: gi|148 RKGLRAAAGGDGAAAPPRALGDEASSSRNLEARAPHLGAAMSAEVKVTGQNQEQFLLLAK 10 20 30 40 50 60 50 60 70 80 90 100 bm0492 SAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SAKGAALATLIHQVLEAPGVYVFGELLDMPNVRELAESDFASTFRLLTVFAYGTYADYLA 70 80 90 100 110 120 110 120 130 140 150 160 bm0492 EARNLPPLTEAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADV :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EARNLPPLTDAQKNKLRHLSVVTLAAKVKCIPYAVLLEALALRNVRQLEDLVIEAVYADV 130 140 150 160 170 180 170 180 190 200 210 220 bm0492 LRGSLDQRNQRLEVDYSIGRDIQRQDLSAIARTLQEWCVGCEVVLSGIEEQVSRANQHKE :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|148 LRGSLDQRNQRLEVDYSIGRDIQRQDLSAIAQTLQEWCVGCEVVLSGIEEQVSRANQHKE 190 200 210 220 230 240 230 240 250 260 270 280 bm0492 QQLGLKQQIESEVANLKKTIKVTTAAAAAATSQDPEQHLTELREPAPGTNQRQPSKKASK :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::: gi|148 QQLGLKQQIESEVANLKKTIKVTTAAAAAATSQDPEQHLTELREPASGTNQRQPSKKASK 250 260 270 280 290 300 290 bm0492 GKGLRGSAKIWSKSN ::: gi|148 GKGEKINPQSTVKPSAK 310 296 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Thu Aug 7 22:08:29 2008 done: Thu Aug 7 22:11:07 2008 Total Scan time: 743.900 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]