hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-00504177/chunk_1/iprscan-20090618-00504177.nocrc
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Query sequence: bm04965
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
PF00069.15.ls Protein kinase domain                       311.8    1.1e-90   1
PF00069.15.fs Protein kinase domain                       309.9    4.3e-90   1
PF07714.7.fs Protein tyrosine kinase                      27.9    5.4e-08   2

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
PF00069.15.fs   1/1     190   506 ..     1   287 []   309.9  4.3e-90
PF07714.7.fs   1/2     190   224 ..     1    38 [.    18.8  2.3e-05
PF00069.15.ls   1/1     190   506 ..     1   287 []   311.8  1.1e-90

Alignments of top-scoring domains:
PF00069.15.fs: domain 1 of 1, from 190 to 506: score 309.9, E = 4.3e-90
                   *->yelleklGsGsfGtVykakhkgtgk.iVAvKiikkrkekskkdktar
                      ye++ +lG+G+fG+V ++++++ g + VAvKi+k +++ ++  ++  
     bm04965   190    YEIVDTLGEGAFGKVVECIDHKAGGrHVAVKIVKNVDRYCEAARS-- 234  

                   rlsEiqilkrLs.....HpN.IvrlidvfedkdhlylVlEycegGLrvld
                      Eiq+l +L+++++++ ++ v+++++fe ++h+++V+E+++      +
     bm04965   235 ---EIQVLEHLNttdpnSTFrCVQMLEWFEHHGHICIVFELLGL-----S 276  

                   Lfdylsetrrkgpll.fsedeakkialQilrgleYLHsngiiHRDLKPeN
                    +d+++    ++++l+f  d+++k+a+Qi++ +++LHsn+  H DLKPeN
     bm04965   277 TYDFIK----ENGFLpFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPEN 322  

                   ILldnngvvda...............flKiaDFGlAkklst.sss.lttf
                   IL+++ ++++a +++ ++++++  ++++K+ DFG+A    t  +++ +t+
     bm04965   323 ILFVQSDYTEAynpkikrdertlinpDIKVVDFGSA----TyDDEhHSTL 368  

                   vGTpwYmAPEvllggngygtkvDvWSlGvilyelltGkpPFsgevqds.l
                   v T++Y+APEv+l + g+++++DvWS+G+il+e ++G + F+ +   ++ 
     bm04965   369 VSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTH---DsK 414  

                   dqlqlirkilgpplefdspewdsisrse.fr...................
                    +l+++++ilgp ++  +++++ + +++++r + +++++ ++  +++ ++
     bm04965   415 EHLAMMERILGPLPKHMIQKTRKRKYFHhDRldwdehssagryvsrrckp 464  

                   ....r.l.pnlseeakdLikkcLnkDPskRltaeeilqHPwf<-*
                    ++ +  ++  +e + dLi k+L++DP+kR+t +e+l+HP+f   
     bm04965   465 lkefMlSqDVEHERLFDLIQKMLEYDPAKRITLREALKHPFF    506  

PF07714.7.fs: domain 1 of 2, from 190 to 224: score 18.8, E = 2.3e-05
                   *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtLke<-*
                       ++  +LGeGaFG+V++++ +   + ++ +VAVK++k+   
     bm04965   190    YEIVDTLGEGAFGKVVECIDH---KAGGRHVAVKIVKN    224  

PF00069.15.ls: domain 1 of 1, from 190 to 506: score 311.8, E = 1.1e-90
                   *->yelleklGsGsfGtVykakhkgtgk.iVAvKiikkrkekskkdktar
                      ye++ +lG+G+fG+V ++++++ g + VAvKi+k +++ ++  ++  
     bm04965   190    YEIVDTLGEGAFGKVVECIDHKAGGrHVAVKIVKNVDRYCEAARS-- 234  

                   rlsEiqilkrLs.....HpN.IvrlidvfedkdhlylVlEycegGLrvld
                      Eiq+l +L+++++++ ++ v+++++fe ++h+++V+E+++      +
     bm04965   235 ---EIQVLEHLNttdpnSTFrCVQMLEWFEHHGHICIVFELLGL-----S 276  

                   Lfdylsetrrkgpll.fsedeakkialQilrgleYLHsngiiHRDLKPeN
                    +d+++    ++++l+f  d+++k+a+Qi++ +++LHsn+  H DLKPeN
     bm04965   277 TYDFIK----ENGFLpFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPEN 322  

                   ILldnngvvda...............flKiaDFGlAkklst.sss.lttf
                   IL+++ ++++a +++ ++++++  ++++K+ DFG+A    t  +++ +t+
     bm04965   323 ILFVQSDYTEAynpkikrdertlinpDIKVVDFGSA----TyDDEhHSTL 368  

                   vGTpwYmAPEvllggngygtkvDvWSlGvilyelltGkpPFsgevqds.l
                   v T++Y+APEv+l + g+++++DvWS+G+il+e ++G + F+ +   ++ 
     bm04965   369 VSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTH---DsK 414  

                   dqlqlirkilgpplefdspewdsisrse.fr...................
                    +l+++++ilgp ++  +++++ + +++++r + +++++ ++  +++ ++
     bm04965   415 EHLAMMERILGPLPKHMIQKTRKRKYFHhDRldwdehssagryvsrrckp 464  

                   ....r.l.pnlseeakdLikkcLnkDPskRltaeeilqHPwf<-*
                    ++ +  ++  +e + dLi k+L++DP+kR+t +e+l+HP+f   
     bm04965   465 lkefMlSqDVEHERLFDLIQKMLEYDPAKRITLREALKHPFF    506  

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