# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm05002.fasta.nr -Q bm05002.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm05002, 517 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6823554 sequences Expectation_n fit: rho(ln(x))= 5.2563+/-0.000183; mu= 11.7532+/- 0.010 mean_var=70.3544+/-13.741, 0's: 36 Z-trim: 41 B-trim: 5 in 1/65 Lambda= 0.152907 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62089240|dbj|BAD93064.1| copine I variant [Homo ( 517) 3536 789.1 0 gi|119596587|gb|EAW76181.1| hCG38213, isoform CRA_ ( 513) 3501 781.3 0 gi|73991786|ref|XP_864737.1| PREDICTED: similar to ( 513) 3311 739.4 4.7e-211 gi|73991804|ref|XP_864903.1| PREDICTED: similar to ( 516) 3311 739.4 4.7e-211 gi|73991796|ref|XP_864829.1| PREDICTED: similar to ( 519) 3101 693.1 4.2e-197 gi|56203428|emb|CAI20122.1| copine I [Homo sapiens ( 386) 2673 598.6 8.7e-169 gi|10719953|sp|Q99829|CPNE1_HUMAN Copine-1 (Copine ( 537) 2639 591.2 2e-166 gi|61372462|gb|AAX43847.1| copine I [synthetic con ( 538) 2639 591.2 2e-166 gi|119596582|gb|EAW76176.1| hCG38213, isoform CRA_ ( 542) 2639 591.2 2.1e-166 gi|48145697|emb|CAG33071.1| CPNE1 [Homo sapiens] ( 537) 2634 590.1 4.4e-166 gi|90076324|dbj|BAE87842.1| unnamed protein produc ( 396) 2576 577.2 2.4e-162 gi|166831595|gb|ABY90120.1| RNA binding motif prot (1460) 2576 577.6 7e-162 gi|164623749|gb|ABY64675.1| RNA binding motif prot (1466) 2574 577.1 9.5e-162 gi|169731516|gb|ACA64888.1| RNA binding motif prot (1465) 2553 572.5 2.4e-160 gi|184185560|gb|ACC68958.1| copine I, isoform 8 (p ( 537) 2498 560.1 4.7e-157 gi|57104182|ref|XP_534404.1| PREDICTED: similar to ( 537) 2484 557.0 4e-156 gi|73991806|ref|XP_864924.1| PREDICTED: similar to ( 540) 2484 557.0 4e-156 gi|115304993|gb|AAI23846.1| Copine I [Bos taurus] ( 537) 2479 555.9 8.6e-156 gi|126540755|emb|CAM46029.1| copine I [Mus musculu ( 378) 2472 554.3 1.9e-155 gi|73991800|ref|XP_864864.1| PREDICTED: similar to ( 544) 2448 549.1 1e-153 gi|73991802|ref|XP_864884.1| PREDICTED: similar to ( 544) 2441 547.5 2.9e-153 gi|190402267|gb|ACE77677.1| RNA binding motif prot (1520) 2442 548.0 5.7e-153 gi|149030842|gb|EDL85869.1| rCG37481, isoform CRA_ ( 536) 2418 542.4 9.7e-152 gi|32363144|sp|Q8C166|CPNE1_MOUSE Copine-1 (Copine ( 536) 2413 541.3 2.1e-151 gi|34785817|gb|AAH57554.1| Copine I [Mus musculus] ( 536) 2413 541.3 2.1e-151 gi|74214557|dbj|BAE31125.1| unnamed protein produc ( 536) 2399 538.2 1.8e-150 gi|73991798|ref|XP_864845.1| PREDICTED: similar to ( 520) 2310 518.6 1.4e-144 gi|114681802|ref|XP_514610.2| PREDICTED: copine I ( 450) 2307 517.9 2e-144 gi|126291753|ref|XP_001381494.1| PREDICTED: simila ( 537) 2288 513.8 4.2e-143 gi|114662698|ref|XP_001142808.1| PREDICTED: copine ( 550) 2140 481.1 2.9e-133 gi|47225157|emb|CAF98784.1| unnamed protein produc ( 514) 2130 478.9 1.2e-132 gi|56203430|emb|CAI20124.1| copine I [Homo sapiens ( 305) 2100 472.1 8.1e-131 gi|150439331|emb|CAO72111.1| copine I [Homo sapien ( 481) 1965 442.5 1.1e-121 gi|66792546|gb|AAH96510.1| Hypothetical protein mg ( 533) 1924 433.5 6.1e-119 gi|48735062|gb|AAH72279.1| MGC82415 protein [Xenop ( 533) 1918 432.1 1.5e-118 gi|14193684|gb|AAK56087.1|AF332058_1 copine 1 prot ( 454) 1916 431.7 1.8e-118 gi|38512098|gb|AAH61671.1| MGC68823 protein [Xenop ( 533) 1899 427.9 2.8e-117 gi|14193682|gb|AAK56086.1|AF332057_1 copine 1 prot ( 448) 1895 427.0 4.5e-117 gi|156225107|gb|EDO45927.1| predicted protein [Nem ( 528) 1879 423.5 5.9e-116 gi|156230371|gb|AAI51890.1| Cpne3l protein [Danio ( 534) 1873 422.2 1.5e-115 gi|28277654|gb|AAH45408.1| Copine III [Danio rerio ( 532) 1835 413.8 5e-113 gi|114620814|ref|XP_519845.2| PREDICTED: copine II ( 591) 1829 412.5 1.4e-112 gi|67460450|sp|Q5RAE1.1|CPNE3_PONAB Copine-3 (Copi ( 537) 1827 412.1 1.7e-112 gi|67476974|sp|Q8BT60|CPNE3_MOUSE Copine-3 (Copine ( 533) 1826 411.8 2e-112 gi|119596586|gb|EAW76180.1| hCG38213, isoform CRA_ ( 304) 1820 410.4 3.2e-112 gi|10719946|sp|O75131|CPNE3_HUMAN Copine-3 (Copine ( 537) 1822 411.0 3.7e-112 gi|54696020|gb|AAV38382.1| copine III [synthetic c ( 538) 1822 411.0 3.7e-112 gi|158259285|dbj|BAF85601.1| unnamed protein produ ( 537) 1821 410.7 4.3e-112 gi|73999554|ref|XP_544163.2| PREDICTED: similar to ( 707) 1822 411.0 4.6e-112 gi|37682119|gb|AAQ97986.1| copine III [Danio rerio ( 533) 1819 410.3 5.8e-112 >>gi|62089240|dbj|BAD93064.1| copine I variant [Homo sap (517 aa) initn: 3536 init1: 3536 opt: 3536 Z-score: 4212.5 bits: 789.1 E(): 0 Smith-Waterman score: 3536; 100.000% identity (100.000% similar) in 517 aa overlap (1-517:1-517) 10 20 30 40 50 60 bm0500 GVNWMAHCVTLVQLSISCDHLIDKDIGSKSDPLCVLLQDVGGGSWAELGRTERVRNCSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GVNWMAHCVTLVQLSISCDHLIDKDIGSKSDPLCVLLQDVGGGSWAELGRTERVRNCSSP 10 20 30 40 50 60 70 80 90 100 110 120 bm0500 EFSKTLQLEYRFETVQKLRFGIYDIDNKTPELRDDDFLGGAECSLGQIVSSQVLTLPLML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EFSKTLQLEYRFETVQKLRFGIYDIDNKTPELRDDDFLGGAECSLGQIVSSQVLTLPLML 70 80 90 100 110 120 130 140 150 160 170 180 bm0500 KPGKPAGRGTITDFLGKSDPFLEFFRQGDGKWHLVYRSEVIKNNLNPTWKRFSVPVQHFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 KPGKPAGRGTITDFLGKSDPFLEFFRQGDGKWHLVYRSEVIKNNLNPTWKRFSVPVQHFC 130 140 150 160 170 180 190 200 210 220 230 240 bm0500 GGNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQAVPAEFECIHPEKQQKKKSYKNSGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GGNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQAVPAEFECIHPEKQQKKKSYKNSGT 190 200 210 220 230 240 250 260 270 280 290 300 bm0500 IRVKICRVETEYSFLDYVMGGCQINFTVGVDFTGSNGDPSSPDSLHYLSPTGVNEYLMAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 IRVKICRVETEYSFLDYVMGGCQINFTVGVDFTGSNGDPSSPDSLHYLSPTGVNEYLMAL 250 260 270 280 290 300 310 320 330 340 350 360 bm0500 WSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCAGIQGIVDAYRQAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 WSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCAGIQGIVDAYRQAL 310 320 330 340 350 360 370 380 390 400 410 420 bm0500 PQVRLYGPTNFAPIINHVARFAAQAAHQGTASQYFMLLLLTDGAVTDVEATREAVVRASN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PQVRLYGPTNFAPIINHVARFAAQAAHQGTASQYFMLLLLTDGAVTDVEATREAVVRASN 370 380 390 400 410 420 430 440 450 460 470 480 bm0500 LPMSVIIVGVGGADFEAMEQLDADGGPLHTRSGQAAARDIVQFVPYRRFQNAPREALAQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LPMSVIIVGVGGADFEAMEQLDADGGPLHTRSGQAAARDIVQFVPYRRFQNAPREALAQT 430 440 450 460 470 480 490 500 510 bm0500 VLAEVPTQLVSYFRAQGWAPLKPLPPSAKDPAQAPQA ::::::::::::::::::::::::::::::::::::: gi|620 VLAEVPTQLVSYFRAQGWAPLKPLPPSAKDPAQAPQA 490 500 510 >>gi|119596587|gb|EAW76181.1| hCG38213, isoform CRA_d [H (513 aa) initn: 3501 init1: 3501 opt: 3501 Z-score: 4170.8 bits: 781.3 E(): 0 Smith-Waterman score: 3501; 100.000% identity (100.000% similar) in 513 aa overlap (5-517:1-513) 10 20 30 40 50 60 bm0500 GVNWMAHCVTLVQLSISCDHLIDKDIGSKSDPLCVLLQDVGGGSWAELGRTERVRNCSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MAHCVTLVQLSISCDHLIDKDIGSKSDPLCVLLQDVGGGSWAELGRTERVRNCSSP 10 20 30 40 50 70 80 90 100 110 120 bm0500 EFSKTLQLEYRFETVQKLRFGIYDIDNKTPELRDDDFLGGAECSLGQIVSSQVLTLPLML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EFSKTLQLEYRFETVQKLRFGIYDIDNKTPELRDDDFLGGAECSLGQIVSSQVLTLPLML 60 70 80 90 100 110 130 140 150 160 170 180 bm0500 KPGKPAGRGTITDFLGKSDPFLEFFRQGDGKWHLVYRSEVIKNNLNPTWKRFSVPVQHFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KPGKPAGRGTITDFLGKSDPFLEFFRQGDGKWHLVYRSEVIKNNLNPTWKRFSVPVQHFC 120 130 140 150 160 170 190 200 210 220 230 240 bm0500 GGNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQAVPAEFECIHPEKQQKKKSYKNSGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GGNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQAVPAEFECIHPEKQQKKKSYKNSGT 180 190 200 210 220 230 250 260 270 280 290 300 bm0500 IRVKICRVETEYSFLDYVMGGCQINFTVGVDFTGSNGDPSSPDSLHYLSPTGVNEYLMAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IRVKICRVETEYSFLDYVMGGCQINFTVGVDFTGSNGDPSSPDSLHYLSPTGVNEYLMAL 240 250 260 270 280 290 310 320 330 340 350 360 bm0500 WSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCAGIQGIVDAYRQAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 WSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCAGIQGIVDAYRQAL 300 310 320 330 340 350 370 380 390 400 410 420 bm0500 PQVRLYGPTNFAPIINHVARFAAQAAHQGTASQYFMLLLLTDGAVTDVEATREAVVRASN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PQVRLYGPTNFAPIINHVARFAAQAAHQGTASQYFMLLLLTDGAVTDVEATREAVVRASN 360 370 380 390 400 410 430 440 450 460 470 480 bm0500 LPMSVIIVGVGGADFEAMEQLDADGGPLHTRSGQAAARDIVQFVPYRRFQNAPREALAQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LPMSVIIVGVGGADFEAMEQLDADGGPLHTRSGQAAARDIVQFVPYRRFQNAPREALAQT 420 430 440 450 460 470 490 500 510 bm0500 VLAEVPTQLVSYFRAQGWAPLKPLPPSAKDPAQAPQA ::::::::::::::::::::::::::::::::::::: gi|119 VLAEVPTQLVSYFRAQGWAPLKPLPPSAKDPAQAPQA 480 490 500 510 >>gi|73991786|ref|XP_864737.1| PREDICTED: similar to Cop (513 aa) initn: 3311 init1: 3311 opt: 3311 Z-score: 3944.3 bits: 739.4 E(): 4.7e-211 Smith-Waterman score: 3311; 93.555% identity (99.219% similar) in 512 aa overlap (5-516:1-512) 10 20 30 40 50 60 bm0500 GVNWMAHCVTLVQLSISCDHLIDKDIGSKSDPLCVLLQDVGGGSWAELGRTERVRNCSSP ::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|739 MAHCVTLVQLSISCDHLIDKDIASKSDPLCVLLQDVGGGSWAELGRTERVRNCSSP 10 20 30 40 50 70 80 90 100 110 120 bm0500 EFSKTLQLEYRFETVQKLRFGIYDIDNKTPELRDDDFLGGAECSLGQIVSSQVLTLPLML ::::::::::.::::::::::::::::::::: ::::::::::::::::::...:::::: gi|739 EFSKTLQLEYHFETVQKLRFGIYDIDNKTPELGDDDFLGGAECSLGQIVSSHIITLPLML 60 70 80 90 100 110 130 140 150 160 170 180 bm0500 KPGKPAGRGTITDFLGKSDPFLEFFRQGDGKWHLVYRSEVIKNNLNPTWKRFSVPVQHFC ::::::::::::::::::::::::::::::::::.::::::::::::::::::::.:::: gi|739 KPGKPAGRGTITDFLGKSDPFLEFFRQGDGKWHLAYRSEVIKNNLNPTWKRFSVPLQHFC 120 130 140 150 160 170 190 200 210 220 230 240 bm0500 GGNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQAVPAEFECIHPEKQQKKKSYKNSGT ::.:::::::.::::::::::::::::.::::::::::.::::::::::::::::::::: gi|739 GGDPSTPIQVRCSDYDSDGSHDLIGTFYTSLAQLQAVPVEFECIHPEKQQKKKSYKNSGT 180 190 200 210 220 230 250 260 270 280 290 300 bm0500 IRVKICRVETEYSFLDYVMGGCQINFTVGVDFTGSNGDPSSPDSLHYLSPTGVNEYLMAL .:::::.:::.::::::::::::::::::.::::::::::::::::::::.:::::: :: gi|739 VRVKICQVETQYSFLDYVMGGCQINFTVGMDFTGSNGDPSSPDSLHYLSPSGVNEYLTAL 240 250 260 270 280 290 310 320 330 340 350 360 bm0500 WSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCAGIQGIVDAYRQAL ::::::.:::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|739 WSVGSVIQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCTGIQGIVDAYRQAL 300 310 320 330 340 350 370 380 390 400 410 420 bm0500 PQVRLYGPTNFAPIINHVARFAAQAAHQGTASQYFMLLLLTDGAVTDVEATREAVVRASN ::::::::::::::::::::.:.:::.: ::::::.:::::::::::::::::::::::. gi|739 PQVRLYGPTNFAPIINHVARLATQAAYQRTASQYFVLLLLTDGAVTDVEATREAVVRASH 360 370 380 390 400 410 430 440 450 460 470 480 bm0500 LPMSVIIVGVGGADFEAMEQLDADGGPLHTRSGQAAARDIVQFVPYRRFQNAPREALAQT ::::::::::::::::::::::::::::.::::.:::::::::::::::::::::.:::: gi|739 LPMSVIIVGVGGADFEAMEQLDADGGPLRTRSGEAAARDIVQFVPYRRFQNAPRETLAQT 420 430 440 450 460 470 490 500 510 bm0500 VLAEVPTQLVSYFRAQGWAPLKPLPPSAKDPAQAPQA :::::::::::::.::::::.::::: ::.:::::: gi|739 VLAEVPTQLVSYFKAQGWAPFKPLPPPAKSPAQAPQV 480 490 500 510 >>gi|73991804|ref|XP_864903.1| PREDICTED: similar to Cop (516 aa) initn: 3311 init1: 3311 opt: 3311 Z-score: 3944.3 bits: 739.4 E(): 4.7e-211 Smith-Waterman score: 3311; 93.555% identity (99.219% similar) in 512 aa overlap (5-516:4-515) 10 20 30 40 50 60 bm0500 GVNWMAHCVTLVQLSISCDHLIDKDIGSKSDPLCVLLQDVGGGSWAELGRTERVRNCSSP ::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|739 MMHMAHCVTLVQLSISCDHLIDKDIASKSDPLCVLLQDVGGGSWAELGRTERVRNCSSP 10 20 30 40 50 70 80 90 100 110 120 bm0500 EFSKTLQLEYRFETVQKLRFGIYDIDNKTPELRDDDFLGGAECSLGQIVSSQVLTLPLML ::::::::::.::::::::::::::::::::: ::::::::::::::::::...:::::: gi|739 EFSKTLQLEYHFETVQKLRFGIYDIDNKTPELGDDDFLGGAECSLGQIVSSHIITLPLML 60 70 80 90 100 110 130 140 150 160 170 180 bm0500 KPGKPAGRGTITDFLGKSDPFLEFFRQGDGKWHLVYRSEVIKNNLNPTWKRFSVPVQHFC ::::::::::::::::::::::::::::::::::.::::::::::::::::::::.:::: gi|739 KPGKPAGRGTITDFLGKSDPFLEFFRQGDGKWHLAYRSEVIKNNLNPTWKRFSVPLQHFC 120 130 140 150 160 170 190 200 210 220 230 240 bm0500 GGNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQAVPAEFECIHPEKQQKKKSYKNSGT ::.:::::::.::::::::::::::::.::::::::::.::::::::::::::::::::: gi|739 GGDPSTPIQVRCSDYDSDGSHDLIGTFYTSLAQLQAVPVEFECIHPEKQQKKKSYKNSGT 180 190 200 210 220 230 250 260 270 280 290 300 bm0500 IRVKICRVETEYSFLDYVMGGCQINFTVGVDFTGSNGDPSSPDSLHYLSPTGVNEYLMAL .:::::.:::.::::::::::::::::::.::::::::::::::::::::.:::::: :: gi|739 VRVKICQVETQYSFLDYVMGGCQINFTVGMDFTGSNGDPSSPDSLHYLSPSGVNEYLTAL 240 250 260 270 280 290 310 320 330 340 350 360 bm0500 WSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCAGIQGIVDAYRQAL ::::::.:::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|739 WSVGSVIQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCTGIQGIVDAYRQAL 300 310 320 330 340 350 370 380 390 400 410 420 bm0500 PQVRLYGPTNFAPIINHVARFAAQAAHQGTASQYFMLLLLTDGAVTDVEATREAVVRASN ::::::::::::::::::::.:.:::.: ::::::.:::::::::::::::::::::::. gi|739 PQVRLYGPTNFAPIINHVARLATQAAYQRTASQYFVLLLLTDGAVTDVEATREAVVRASH 360 370 380 390 400 410 430 440 450 460 470 480 bm0500 LPMSVIIVGVGGADFEAMEQLDADGGPLHTRSGQAAARDIVQFVPYRRFQNAPREALAQT ::::::::::::::::::::::::::::.::::.:::::::::::::::::::::.:::: gi|739 LPMSVIIVGVGGADFEAMEQLDADGGPLRTRSGEAAARDIVQFVPYRRFQNAPRETLAQT 420 430 440 450 460 470 490 500 510 bm0500 VLAEVPTQLVSYFRAQGWAPLKPLPPSAKDPAQAPQA :::::::::::::.::::::.::::: ::.:::::: gi|739 VLAEVPTQLVSYFKAQGWAPFKPLPPPAKSPAQAPQV 480 490 500 510 >>gi|73991796|ref|XP_864829.1| PREDICTED: similar to Cop (519 aa) initn: 3119 init1: 1887 opt: 3101 Z-score: 3693.9 bits: 693.1 E(): 4.2e-197 Smith-Waterman score: 3101; 88.760% identity (94.767% similar) in 516 aa overlap (5-516:4-518) 10 20 30 40 50 60 bm0500 GVNWMAHCVTLVQLSISCDHLIDKDIGSKSDPLCVLLQDVGGGSWAELGRTERVRNCSSP ::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|739 MMHMAHCVTLVQLSISCDHLIDKDIASKSDPLCVLLQDVGGGSWAELGRTERVRNCSSP 10 20 30 40 50 70 80 90 100 110 120 bm0500 EFSKTLQLEYRFETVQKLRFGIYDIDNKTPELRDDDFLGGAECSLGQIVSSQVLTLPLML ::::::::::.::::::::::::::::::::: :::::::::::::: ::.: . .. gi|739 EFSKTLQLEYHFETVQKLRFGIYDIDNKTPELGDDDFLGGAECSLGQ-VSAQEMKDSHVV 60 70 80 90 100 110 130 140 150 160 170 180 bm0500 KPGKPAGRGTITDFLGKSDPFLEFFRQGDGKWHLVYRSEVIKNNLNPTWKRFSVPVQHFC : ::::::::::::::::::::::.::::::::::::::::::::.:::: gi|739 TMEVEARNLDKKDFLGKSDPFLEFFRQGDGKWHLAYRSEVIKNNLNPTWKRFSVPLQHFC 120 130 140 150 160 170 190 200 210 220 230 bm0500 GGNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQAV----PAEFECIHPEKQQKKKSYK ::.:::::::.::::::::::::::::.:::::::: .::::::::::::::::: gi|739 GGDPSTPIQVRCSDYDSDGSHDLIGTFYTSLAQLQAFFFSHQVEFECIHPEKQQKKKSYK 180 190 200 210 220 230 240 250 260 270 280 290 bm0500 NSGTIRVKICRVETEYSFLDYVMGGCQINFTVGVDFTGSNGDPSSPDSLHYLSPTGVNEY ::::.:::::.:::.:::::::::::::::::..::::::::::::::::::::.::::: gi|739 NSGTVRVKICQVETQYSFLDYVMGGCQINFTVSMDFTGSNGDPSSPDSLHYLSPSGVNEY 240 250 260 270 280 290 300 310 320 330 340 350 bm0500 LMALWSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCAGIQGIVDAY : ::::::::.:::::::::::::::::::::::::::::::::::::::.::::::::: gi|739 LTALWSVGSVIQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCTGIQGIVDAY 300 310 320 330 340 350 360 370 380 390 400 410 bm0500 RQALPQVRLYGPTNFAPIINHVARFAAQAAHQGTASQYFMLLLLTDGAVTDVEATREAVV ::::::::::::::::::::::::.:.:::.: ::::::.:::::::::::::::::::: gi|739 RQALPQVRLYGPTNFAPIINHVARLATQAAYQRTASQYFVLLLLTDGAVTDVEATREAVV 360 370 380 390 400 410 420 430 440 450 460 470 bm0500 RASNLPMSVIIVGVGGADFEAMEQLDADGGPLHTRSGQAAARDIVQFVPYRRFQNAPREA :::.::::::::::::::::::::::::::::.::::.:::::::::::::::::::::. gi|739 RASHLPMSVIIVGVGGADFEAMEQLDADGGPLRTRSGEAAARDIVQFVPYRRFQNAPRET 420 430 440 450 460 470 480 490 500 510 bm0500 LAQTVLAEVPTQLVSYFRAQGWAPLKPLPPSAKDPAQAPQA :::::::::::::::::.::::::.::::: ::.:::::: gi|739 LAQTVLAEVPTQLVSYFKAQGWAPFKPLPPPAKSPAQAPQV 480 490 500 510 >>gi|56203428|emb|CAI20122.1| copine I [Homo sapiens] (386 aa) initn: 2673 init1: 2673 opt: 2673 Z-score: 3185.5 bits: 598.6 E(): 8.7e-169 Smith-Waterman score: 2673; 100.000% identity (100.000% similar) in 386 aa overlap (5-390:1-386) 10 20 30 40 50 60 bm0500 GVNWMAHCVTLVQLSISCDHLIDKDIGSKSDPLCVLLQDVGGGSWAELGRTERVRNCSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 MAHCVTLVQLSISCDHLIDKDIGSKSDPLCVLLQDVGGGSWAELGRTERVRNCSSP 10 20 30 40 50 70 80 90 100 110 120 bm0500 EFSKTLQLEYRFETVQKLRFGIYDIDNKTPELRDDDFLGGAECSLGQIVSSQVLTLPLML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 EFSKTLQLEYRFETVQKLRFGIYDIDNKTPELRDDDFLGGAECSLGQIVSSQVLTLPLML 60 70 80 90 100 110 130 140 150 160 170 180 bm0500 KPGKPAGRGTITDFLGKSDPFLEFFRQGDGKWHLVYRSEVIKNNLNPTWKRFSVPVQHFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 KPGKPAGRGTITDFLGKSDPFLEFFRQGDGKWHLVYRSEVIKNNLNPTWKRFSVPVQHFC 120 130 140 150 160 170 190 200 210 220 230 240 bm0500 GGNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQAVPAEFECIHPEKQQKKKSYKNSGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 GGNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQAVPAEFECIHPEKQQKKKSYKNSGT 180 190 200 210 220 230 250 260 270 280 290 300 bm0500 IRVKICRVETEYSFLDYVMGGCQINFTVGVDFTGSNGDPSSPDSLHYLSPTGVNEYLMAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 IRVKICRVETEYSFLDYVMGGCQINFTVGVDFTGSNGDPSSPDSLHYLSPTGVNEYLMAL 240 250 260 270 280 290 310 320 330 340 350 360 bm0500 WSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCAGIQGIVDAYRQAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|562 WSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCAGIQGIVDAYRQAL 300 310 320 330 340 350 370 380 390 400 410 420 bm0500 PQVRLYGPTNFAPIINHVARFAAQAAHQGTASQYFMLLLLTDGAVTDVEATREAVVRASN :::::::::::::::::::::::::::::: gi|562 PQVRLYGPTNFAPIINHVARFAAQAAHQGT 360 370 380 >>gi|10719953|sp|Q99829|CPNE1_HUMAN Copine-1 (Copine I) (537 aa) initn: 3487 init1: 2639 opt: 2639 Z-score: 3142.8 bits: 591.2 E(): 2e-166 Smith-Waterman score: 3443; 95.531% identity (95.531% similar) in 537 aa overlap (5-517:1-537) 10 20 30 40 50 60 bm0500 GVNWMAHCVTLVQLSISCDHLIDKDIGSKSDPLCVLLQDVGGGSWAELGRTERVRNCSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|107 MAHCVTLVQLSISCDHLIDKDIGSKSDPLCVLLQDVGGGSWAELGRTERVRNCSSP 10 20 30 40 50 70 80 90 100 110 120 bm0500 EFSKTLQLEYRFETVQKLRFGIYDIDNKTPELRDDDFLGGAECSLGQIVSSQVLTLPLML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|107 EFSKTLQLEYRFETVQKLRFGIYDIDNKTPELRDDDFLGGAECSLGQIVSSQVLTLPLML 60 70 80 90 100 110 130 140 150 bm0500 KPGKPAGRGTIT------------------------DFLGKSDPFLEFFRQGDGKWHLVY :::::::::::: :::::::::::::::::::::::: gi|107 KPGKPAGRGTITVSAQELKDNRVVTMEVEARNLDKKDFLGKSDPFLEFFRQGDGKWHLVY 120 130 140 150 160 170 160 170 180 190 200 210 bm0500 RSEVIKNNLNPTWKRFSVPVQHFCGGNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|107 RSEVIKNNLNPTWKRFSVPVQHFCGGNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQA 180 190 200 210 220 230 220 230 240 250 260 270 bm0500 VPAEFECIHPEKQQKKKSYKNSGTIRVKICRVETEYSFLDYVMGGCQINFTVGVDFTGSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|107 VPAEFECIHPEKQQKKKSYKNSGTIRVKICRVETEYSFLDYVMGGCQINFTVGVDFTGSN 240 250 260 270 280 290 280 290 300 310 320 330 bm0500 GDPSSPDSLHYLSPTGVNEYLMALWSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|107 GDPSSPDSLHYLSPTGVNEYLMALWSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFA 300 310 320 330 340 350 340 350 360 370 380 390 bm0500 LNFNPSNPYCAGIQGIVDAYRQALPQVRLYGPTNFAPIINHVARFAAQAAHQGTASQYFM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|107 LNFNPSNPYCAGIQGIVDAYRQALPQVRLYGPTNFAPIINHVARFAAQAAHQGTASQYFM 360 370 380 390 400 410 400 410 420 430 440 450 bm0500 LLLLTDGAVTDVEATREAVVRASNLPMSVIIVGVGGADFEAMEQLDADGGPLHTRSGQAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|107 LLLLTDGAVTDVEATREAVVRASNLPMSVIIVGVGGADFEAMEQLDADGGPLHTRSGQAA 420 430 440 450 460 470 460 470 480 490 500 510 bm0500 ARDIVQFVPYRRFQNAPREALAQTVLAEVPTQLVSYFRAQGWAPLKPLPPSAKDPAQAPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|107 ARDIVQFVPYRRFQNAPREALAQTVLAEVPTQLVSYFRAQGWAPLKPLPPSAKDPAQAPQ 480 490 500 510 520 530 bm0500 A : gi|107 A >>gi|61372462|gb|AAX43847.1| copine I [synthetic constru (538 aa) initn: 3487 init1: 2639 opt: 2639 Z-score: 3142.8 bits: 591.2 E(): 2e-166 Smith-Waterman score: 3443; 95.531% identity (95.531% similar) in 537 aa overlap (5-517:1-537) 10 20 30 40 50 60 bm0500 GVNWMAHCVTLVQLSISCDHLIDKDIGSKSDPLCVLLQDVGGGSWAELGRTERVRNCSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 MAHCVTLVQLSISCDHLIDKDIGSKSDPLCVLLQDVGGGSWAELGRTERVRNCSSP 10 20 30 40 50 70 80 90 100 110 120 bm0500 EFSKTLQLEYRFETVQKLRFGIYDIDNKTPELRDDDFLGGAECSLGQIVSSQVLTLPLML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 EFSKTLQLEYRFETVQKLRFGIYDIDNKTPELRDDDFLGGAECSLGQIVSSQVLTLPLML 60 70 80 90 100 110 130 140 150 bm0500 KPGKPAGRGTIT------------------------DFLGKSDPFLEFFRQGDGKWHLVY :::::::::::: :::::::::::::::::::::::: gi|613 KPGKPAGRGTITVSAQELKDNRVVTMEVEARNLDKKDFLGKSDPFLEFFRQGDGKWHLVY 120 130 140 150 160 170 160 170 180 190 200 210 bm0500 RSEVIKNNLNPTWKRFSVPVQHFCGGNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 RSEVIKNNLNPTWKRFSVPVQHFCGGNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQA 180 190 200 210 220 230 220 230 240 250 260 270 bm0500 VPAEFECIHPEKQQKKKSYKNSGTIRVKICRVETEYSFLDYVMGGCQINFTVGVDFTGSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 VPAEFECIHPEKQQKKKSYKNSGTIRVKICRVETEYSFLDYVMGGCQINFTVGVDFTGSN 240 250 260 270 280 290 280 290 300 310 320 330 bm0500 GDPSSPDSLHYLSPTGVNEYLMALWSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 GDPSSPDSLHYLSPTGVNEYLMALWSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFA 300 310 320 330 340 350 340 350 360 370 380 390 bm0500 LNFNPSNPYCAGIQGIVDAYRQALPQVRLYGPTNFAPIINHVARFAAQAAHQGTASQYFM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 LNFNPSNPYCAGIQGIVDAYRQALPQVRLYGPTNFAPIINHVARFAAQAAHQGTASQYFM 360 370 380 390 400 410 400 410 420 430 440 450 bm0500 LLLLTDGAVTDVEATREAVVRASNLPMSVIIVGVGGADFEAMEQLDADGGPLHTRSGQAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 LLLLTDGAVTDVEATREAVVRASNLPMSVIIVGVGGADFEAMEQLDADGGPLHTRSGQAA 420 430 440 450 460 470 460 470 480 490 500 510 bm0500 ARDIVQFVPYRRFQNAPREALAQTVLAEVPTQLVSYFRAQGWAPLKPLPPSAKDPAQAPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 ARDIVQFVPYRRFQNAPREALAQTVLAEVPTQLVSYFRAQGWAPLKPLPPSAKDPAQAPQ 480 490 500 510 520 530 bm0500 A : gi|613 AL >>gi|119596582|gb|EAW76176.1| hCG38213, isoform CRA_b [H (542 aa) initn: 3487 init1: 2639 opt: 2639 Z-score: 3142.8 bits: 591.2 E(): 2.1e-166 Smith-Waterman score: 3443; 95.531% identity (95.531% similar) in 537 aa overlap (5-517:6-542) 10 20 30 40 50 bm0500 GVNWMAHCVTLVQLSISCDHLIDKDIGSKSDPLCVLLQDVGGGSWAELGRTERVRNCSS ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MKMMHMAHCVTLVQLSISCDHLIDKDIGSKSDPLCVLLQDVGGGSWAELGRTERVRNCSS 10 20 30 40 50 60 60 70 80 90 100 110 bm0500 PEFSKTLQLEYRFETVQKLRFGIYDIDNKTPELRDDDFLGGAECSLGQIVSSQVLTLPLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PEFSKTLQLEYRFETVQKLRFGIYDIDNKTPELRDDDFLGGAECSLGQIVSSQVLTLPLM 70 80 90 100 110 120 120 130 140 150 bm0500 LKPGKPAGRGTIT------------------------DFLGKSDPFLEFFRQGDGKWHLV ::::::::::::: ::::::::::::::::::::::: gi|119 LKPGKPAGRGTITVSAQELKDNRVVTMEVEARNLDKKDFLGKSDPFLEFFRQGDGKWHLV 130 140 150 160 170 180 160 170 180 190 200 210 bm0500 YRSEVIKNNLNPTWKRFSVPVQHFCGGNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YRSEVIKNNLNPTWKRFSVPVQHFCGGNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQ 190 200 210 220 230 240 220 230 240 250 260 270 bm0500 AVPAEFECIHPEKQQKKKSYKNSGTIRVKICRVETEYSFLDYVMGGCQINFTVGVDFTGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AVPAEFECIHPEKQQKKKSYKNSGTIRVKICRVETEYSFLDYVMGGCQINFTVGVDFTGS 250 260 270 280 290 300 280 290 300 310 320 330 bm0500 NGDPSSPDSLHYLSPTGVNEYLMALWSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NGDPSSPDSLHYLSPTGVNEYLMALWSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEF 310 320 330 340 350 360 340 350 360 370 380 390 bm0500 ALNFNPSNPYCAGIQGIVDAYRQALPQVRLYGPTNFAPIINHVARFAAQAAHQGTASQYF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ALNFNPSNPYCAGIQGIVDAYRQALPQVRLYGPTNFAPIINHVARFAAQAAHQGTASQYF 370 380 390 400 410 420 400 410 420 430 440 450 bm0500 MLLLLTDGAVTDVEATREAVVRASNLPMSVIIVGVGGADFEAMEQLDADGGPLHTRSGQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MLLLLTDGAVTDVEATREAVVRASNLPMSVIIVGVGGADFEAMEQLDADGGPLHTRSGQA 430 440 450 460 470 480 460 470 480 490 500 510 bm0500 AARDIVQFVPYRRFQNAPREALAQTVLAEVPTQLVSYFRAQGWAPLKPLPPSAKDPAQAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AARDIVQFVPYRRFQNAPREALAQTVLAEVPTQLVSYFRAQGWAPLKPLPPSAKDPAQAP 490 500 510 520 530 540 bm0500 QA :: gi|119 QA >>gi|48145697|emb|CAG33071.1| CPNE1 [Homo sapiens] (537 aa) initn: 3482 init1: 2634 opt: 2634 Z-score: 3136.9 bits: 590.1 E(): 4.4e-166 Smith-Waterman score: 3438; 95.345% identity (95.531% similar) in 537 aa overlap (5-517:1-537) 10 20 30 40 50 60 bm0500 GVNWMAHCVTLVQLSISCDHLIDKDIGSKSDPLCVLLQDVGGGSWAELGRTERVRNCSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 MAHCVTLVQLSISCDHLIDKDIGSKSDPLCVLLQDVGGGSWAELGRTERVRNCSSP 10 20 30 40 50 70 80 90 100 110 120 bm0500 EFSKTLQLEYRFETVQKLRFGIYDIDNKTPELRDDDFLGGAECSLGQIVSSQVLTLPLML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 EFSKTLQLEYRFETVQKLRFGIYDIDNKTPELRDDDFLGGAECSLGQIVSSQVLTLPLML 60 70 80 90 100 110 130 140 150 bm0500 KPGKPAGRGTIT------------------------DFLGKSDPFLEFFRQGDGKWHLVY :::::::::::: :::::::::::::::::::::::: gi|481 KPGKPAGRGTITVSAQELKDNRVVTMEVEARNLDKKDFLGKSDPFLEFFRQGDGKWHLVY 120 130 140 150 160 170 160 170 180 190 200 210 bm0500 RSEVIKNNLNPTWKRFSVPVQHFCGGNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 RSEVIKNNLNPTWKRFSVPVQHFCGGNPSTPIQVQCSDYDSDGSHDLIGTFHTSLAQLQA 180 190 200 210 220 230 220 230 240 250 260 270 bm0500 VPAEFECIHPEKQQKKKSYKNSGTIRVKICRVETEYSFLDYVMGGCQINFTVGVDFTGSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 VPAEFECIHPEKQQKKKSYKNSGTIRVKICRVETEYSFLDYVMGGCQINFTVGVDFTGSN 240 250 260 270 280 290 280 290 300 310 320 330 bm0500 GDPSSPDSLHYLSPTGVNEYLMALWSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 GDPSSPDSLHYLSPTGVNEYLMALWSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFA 300 310 320 330 340 350 340 350 360 370 380 390 bm0500 LNFNPSNPYCAGIQGIVDAYRQALPQVRLYGPTNFAPIINHVARFAAQAAHQGTASQYFM ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 LNFNPSNPYCVGIQGIVDAYRQALPQVRLYGPTNFAPIINHVARFAAQAAHQGTASQYFM 360 370 380 390 400 410 400 410 420 430 440 450 bm0500 LLLLTDGAVTDVEATREAVVRASNLPMSVIIVGVGGADFEAMEQLDADGGPLHTRSGQAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 LLLLTDGAVTDVEATREAVVRASNLPMSVIIVGVGGADFEAMEQLDADGGPLHTRSGQAA 420 430 440 450 460 470 460 470 480 490 500 510 bm0500 ARDIVQFVPYRRFQNAPREALAQTVLAEVPTQLVSYFRAQGWAPLKPLPPSAKDPAQAPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 ARDIVQFVPYRRFQNAPREALAQTVLAEVPTQLVSYFRAQGWAPLKPLPPSAKDPAQAPQ 480 490 500 510 520 530 bm0500 A : gi|481 A 517 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Thu Aug 7 22:32:30 2008 done: Thu Aug 7 22:34:48 2008 Total Scan time: 884.570 Total Display time: 0.170 Function used was FASTA [version 34.26.5 April 26, 2007]