hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-22405399/chunk_1/iprscan-20080807-22405399.nocrc
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Query sequence: bm05103
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
PF00069.15.fs Protein kinase domain                       113.6    3.8e-32   1
PF07714.7.fs Protein tyrosine kinase                      34.9    4.9e-10   1
PF00069.15.ls Protein kinase domain                        -0.1    1.4e-08   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
PF00069.15.ls   1/1       6   208 ..     1   287 []    -0.1  1.4e-08
PF00069.15.fs   1/1      13   136 ..    17   153 ..   113.6  3.8e-32
PF07714.7.fs   1/1      42   136 ..    52   153 ..    34.9  4.9e-10

Alignments of top-scoring domains:
PF00069.15.ls: domain 1 of 1, from 6 to 208: score -0.1, E = 1.4e-08
                   *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
                               G++Gt  +a++  t +iVA+K+++ +kek++ +++ +r
     bm05103     6    ---------GASGTQDRARDTQTDEIVALKKVRMDKEKDGIPISSLR 43   

                   lsEiqilkrLsHpNIvrlidvfed..kdhlylVlEycegGLrvldLfdyl
                     Ei +l+rL+HpNIv+l++v+  ++  ++ lV+ yce      dL ++l
     bm05103    44 --EITLLLRLRHPNIVELKEVVVGnhLESIFLVMGYCEQ-----DLASLL 86   

                   setrrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnn
                       + +p+  se ++k+i+lQ+lrgl+YLH+n iiHRDLK +N+L+ ++
     bm05103    87 E--NMPTPF--SEAQVKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDK 132  

                   gvvdaflKiaDFGlAkkls.......t.sss.lttfvGTpwYmAPEvllg
                   g v            k   ++ +   +++ +++ + +G   +++   ll 
     bm05103   133 GCV------------KTGTeplnccwEpPRRpPASTCGEEIWLP---LL- 166  

                   gngygtkvDvWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpple
                   g+  g                       g+      + +l+ k       
     bm05103   167 GPQEGL----------------------GQ-----EPGHLVPKLSL---- 185  

                   fdspewdsisrsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPw
                                        + +  +  +++++     +t++e+  +  
     bm05103   186 ---------------------RGGAGVQWGLCQP-----PTPREVGLS-- 207  

                   f<-*
                   +   
     bm05103   208 L    208  

PF00069.15.fs: domain 1 of 1, from 13 to 136: score 113.6, E = 3.8e-32
                   *->kakhkgtgkiVAvKiikkrkekskkdktarrlsEiqilkrLsHpNIv
                      +a++  t +iVA+K+++ +kek++ +++ +r  Ei +l+rL+HpNIv
     bm05103    13    RARDTQTDEIVALKKVRMDKEKDGIPISSLR--EITLLLRLRHPNIV 57   

                   rlidvfed..kdhlylVlEycegGLrvldLfdylsetrrkgpllfsedea
                   +l++v+  ++  ++ lV+ yce      dL ++l    + +p+  se ++
     bm05103    58 ELKEVVVGnhLESIFLVMGYCEQ-----DLASLLE--NMPTPF--SEAQV 98   

                   kkialQilrgleYLHsngiiHRDLKPeNILldnngvvdaflK<-*
                   k+i+lQ+lrgl+YLH+n iiHRDLK +N+L+ ++g v    K   
     bm05103    99 KCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDKGCV----K    136  

PF07714.7.fs: domain 1 of 1, from 42 to 136: score 34.9, E = 4.9e-10
                   *->lrEAsiMkklGdHpNiVrLlGvctkegePggpg.lyiVtEymegGdL
                      lrE+ ++ +l +HpNiV L  v++  g      ++++V+ y+e  dL
     bm05103    42    LREITLLLRL-RHPNIVELKEVVV--GNH--LEsIFLVMGYCEQ-DL 82   

                   ldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLVs
                    + L +   + p++  +  ++ lQ+ +G++YL+++ ++HRDL   N L +
     bm05103    83 ASLLENM--PTPFSEAQVKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMT 130  

                   enlvVK<-*
                   ++++VK   
     bm05103   131 DKGCVK    136  

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