hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-22405399/chunk_1/iprscan-20080807-22405399.nocrc
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Query sequence: bm05103
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00220                                                  28.5    2.3e-11   1
SM00219                                                -106.6    0.00015   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00219    1/1       5   161 ..     1   280 []  -106.6  0.00015
SM00220    1/1       5   163 ..     1   231 []    28.5  2.3e-11

Alignments of top-scoring domains:
SM00219: domain 1 of 1, from 5 to 161: score -106.6, E = 0.00015
                   *->ltlgkkLGeGaFGeVykGtlk...ieVAVKtLkeda.....keeFlr
                              +Ga G+  +++ +++++ VA K+++ d+++++     lr
     bm05103     5    --------HGASGTQDRARDTqtdEIVALKKVRMDKekdgiPISSLR 43   

                   EakiMkklGgkHpNiVkLlGvcteegrrFmevePlmivmEymegGdLldy
                   E+ ++ +l  +HpNiV L  v++         e +++vm y+e  dL + 
     bm05103    44 EITLLLRL--RHPNIVELKEVVVGN-----HLESIFLVMGYCEQ-DLASL 85   

                   LrknrpklslsdLlsfAlQIAkGMeYLesknfvHRDLAARNcLvgenkvv
                   L +    +s ++   + lQ+ +G +YL+++ ++HRDL   N L ++++  
     bm05103    86 LENMPTPFSEAQVKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDKG-- 133  

                   KIsDFGLsRdlyddDkkGeskdyYrkkggkggktllPirWmAPEslkdgk
                                         +++     g+                  
     bm05103   134 -------------C--------VKT-----GTE----------------- 140  

                   FtskSDVWSFGVlLWEiftlGeqPYpgeiqqfmsneevleylkkGyRlpk
                                                                     
     bm05103     - -------------------------------------------------- -    

                   PendlpiSsvtCPdelYdlMlqCWaedPedRPtFselverl<-*
                   P n                  +CW+     RP  s++ e++   
     bm05103   141 PLN------------------CCWEP--PRRPPASTCGEEI    161  

SM00220: domain 1 of 1, from 5 to 163: score 28.5, E = 2.3e-11
                   *->YellkklGkGaFGkVylardkktgrlvAiKvik.........erilr
                              +Ga G+  +ard+ t+++vA+K+++ ++++++ +++ lr
     bm05103     5    --------HGASGTQDRARDTQTDEIVALKKVRmdkekdgipISSLR 43   

                   EikiLkk.dHPNIVkLydvfed...dklylVmEyceGdlGdLfdllkkrg
                   Ei +L + +HPNIV L++v + ++ ++++lVm yce+   dL +ll++++
     bm05103    44 EITLLLRlRHPNIVELKEVVVGnhlESIFLVMGYCEQ---DLASLLENMP 90   

                   rrglrkvlsE.earfyfrQilsaLeYLHsqgIiHRDLKPeNiLLds..hv
                   ++     +sE ++++++ Q+l++L+YLH++ IiHRDLK +N+L++++++v
     bm05103    91 TP-----FSEaQVKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDkgCV 135  

                   KlaDFGlArqlttfvGTpeYmAPEvlgYgkpavDiWSlGcilyElltGkp
                   K                                             tG  
     bm05103   136 K---------------------------------------------TGTE 140  

                   PFpqldlifkkigSpeakdLikklLvkdPekRlta.eaLedeldikaHPf
                   P                       ++++P +R+ a+ + e         +
     bm05103   141 PLN---------------------CCWEPPRRPPAsTCGE-------EIW 162  

                   f<-*
                   +   
     bm05103   163 L    163  

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