hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090416/iprscan-20090416-11575341/chunk_1/iprscan-20090416-11575341.nocrc
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Query sequence: bm05106
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00563                                                  96.5    3.2e-24   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00563    1/1      95   217 ..     1   135 []    96.5  3.2e-24

Alignments of top-scoring domains:
SM00563: domain 1 of 1, from 95 to 217: score 96.5, E = 3.2e-24
                   *->alvvaNHqSylDplvlsallprk...rrvrfvakkelfkiPllGwll
                      a+vv NH   +D+l+ ++l  r++  +  +++akkel+++P++Gw++
     bm05106    95    AIVVLNHKFEIDFLCGWSLSERFgllGGSKVLAKKELAYVPIIGWMW 141  

                   rlagaifidRsngdrkaraalreavrryFEnhellkegew..lviFPEGT
                   +++ ++f+ R+++  ++r+++++ ++      +l++++e+   +i  EGT
     bm05106   142 YFTEMVFCSRKWE--QDRKTVATSLQ------HLRDYPEKyfFLIHCEGT 183  

                   rsrdgkldgeeerlkllpfKkGafrlAlkag.....dvpivPvaisgt<-
                   r++++              K  + + +++a++ ++ +++++P++ ++   
     bm05106   184 RFTEK--------------KHEISMQVARAKglprlKHHLLPRTKGFA   217  

                   *
                    
     bm05106     -   -    

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