hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-00565991/chunk_1/iprscan-20090618-00565991.nocrc
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Query sequence: bm05134
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
PF00595.14.ls PDZ domain (Also known as DHR or GLGF)     113.6    5.3e-31   2
PF00595.14.fs PDZ domain (Also known as DHR or GLGF)     109.7    3.4e-30   2
PF09007.1.fs EBP50, C-terminal                           98.0    9.5e-29   1
PF09007.1.ls EBP50, C-terminal                          100.0    6.5e-27   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
PF00595.14.ls   1/2      79   156 ..     1    86 []    53.7  5.5e-13
PF00595.14.fs   1/2      79   156 ..     1    86 []    51.8  6.7e-14
PF00595.14.fs   2/2     219   296 ..     1    86 []    57.9  1.3e-15
PF00595.14.ls   2/2     219   296 ..     1    86 []    59.8    8e-15
PF09007.1.fs   1/1     383   423 .]     1    42 []    98.0  9.5e-29
PF09007.1.ls   1/1     383   423 .]     1    42 []   100.0  6.5e-27

Alignments of top-scoring domains:
PF00595.14.ls: domain 1 of 2, from 79 to 156: score 53.7, E = 5.5e-13
                   *->evtlekedkrgglGfsikggsdkgadkgifvsevlpGsgaAeagGrL
                      +  lek  +++g Gf ++g+++k    g ++  v pG ++Ae++G L
     bm05134    79    LCCLEK--GPNGYGFHLHGEKGK---LGQYIRLVEPG-SPAEKAG-L 118  

                   qaGDqIlsvNGqdlenlsheeavlalkgsggsevtLtvl<-*
                    aGD++++vNG+++e+ +h ++v  ++ + +  v+L+v    
     bm05134   119 LAGDRLVEVNGENVEKETHQQVVSRIRAALN-AVRLLVV    156  

PF00595.14.fs: domain 1 of 2, from 79 to 156: score 51.8, E = 6.7e-14
                   *->evtlekedkrgglGfsikggsdkgadkgifvsevlpGsgaAeagGrL
                      +  lek  +++g Gf ++g+++k    g ++  v pG ++Ae++G L
     bm05134    79    LCCLEK--GPNGYGFHLHGEKGK---LGQYIRLVEPG-SPAEKAG-L 118  

                   qaGDqIlsvNGqdlenlsheeavlalkgsggsevtLtvl<-*
                    aGD++++vNG+++e+ +h ++v  ++ + +  v+L+v    
     bm05134   119 LAGDRLVEVNGENVEKETHQQVVSRIRAALN-AVRLLVV    156  

PF00595.14.fs: domain 2 of 2, from 219 to 296: score 57.9, E = 1.3e-15
                   *->evtlekedkrgglGfsikggsdkgadkgifvsevlpGsgaAeagGrL
                      + t++k  +++g Gf++++ ++k   +g f+ +v p+ ++Aea+G L
     bm05134   219    LCTMKK--GPSGYGFNLHSDKSK---PGQFIRSVDPD-SPAEASG-L 258  

                   qaGDqIlsvNGqdlenlsheeavlalkgsggsevtLtvl<-*
                   +a D+I++vNG+ +e+ +h ++v a++  g+ e +L+v    
     bm05134   259 RAQDRIVEVNGVCMEGKQHGDVVSAIRAGGD-ETKLLVV    296  

PF00595.14.ls: domain 2 of 2, from 219 to 296: score 59.8, E = 8e-15
                   *->evtlekedkrgglGfsikggsdkgadkgifvsevlpGsgaAeagGrL
                      + t++k  +++g Gf++++ ++k   +g f+ +v p+ ++Aea+G L
     bm05134   219    LCTMKK--GPSGYGFNLHSDKSK---PGQFIRSVDPD-SPAEASG-L 258  

                   qaGDqIlsvNGqdlenlsheeavlalkgsggsevtLtvl<-*
                   +a D+I++vNG+ +e+ +h ++v a++  g+ e +L+v    
     bm05134   259 RAQDRIVEVNGVCMEGKQHGDVVSAIRAGGD-ETKLLVV    296  

PF09007.1.fs: domain 1 of 1, from 383 to 423: score 98.0, E = 9.5e-29
                   *->epgLeLnlsaaeAkEkahiqkRskKrAPqMDWsKkrElFSNl<-*
                      +p+L++n+s+a+AkE+ah qkRs+KrAPqMDWsKk+ElFSNl   
     bm05134   383    DPILDFNISLAMAKERAH-QKRSSKRAPQMDWSKKNELFSNL    423  

PF09007.1.ls: domain 1 of 1, from 383 to 423: score 100.0, E = 6.5e-27
                   *->epgLeLnlsaaeAkEkahiqkRskKrAPqMDWsKkrElFSNl<-*
                      +p+L++n+s+a+AkE+ah qkRs+KrAPqMDWsKk+ElFSNl   
     bm05134   383    DPILDFNISLAMAKERAH-QKRSSKRAPQMDWSKKNELFSNL    423  

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