hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-22595203/chunk_1/iprscan-20080807-22595203.nocrc
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Query sequence: bm05157
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00559                                                 214.3    1.1e-59   1
SM00513                                                  30.4    0.00024   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00559    1/1     312   458 ..     1   155 []   214.3  1.1e-59
SM00513    1/1     577   611 ..     1    35 []    30.4  0.00024

Alignments of top-scoring domains:
SM00559: domain 1 of 1, from 312 to 458: score 214.3, E = 1.1e-59
                   *->gkevkpedivkgYeyGkgryvvlsdqdeleqlkyksedpgleilGFv
                      g+ ++p+d+++++ yG +r+++l++ +e+e+lk++++ pgl+++GF+
     bm05157   312    GGLLLPSDTKRSQIYG-SRQIILEK-EETEELKRFDD-PGLMLMGFK 355  

                   plselppyyflkpsyflvPddksvegstkafsaLleaLletnkiAIarfv
                   pl  l+++++l+ps f++P+++ v+gs+++fsaLl ++le++++A++r++
     bm05157   356 PLVLLKKHHYLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYT 405  

                   lrtksnrprLvaLrPyeeekddqdsqkkppltveglvlvqLPFaDdvRkl
                   +r++++ p++vaL+P+eee ddq++q++pp    g+ lv LPFaDd Rk 
     bm05157   406 PRRNIP-PYFVALVPQEEELDDQKIQVTPP----GFQLVFLPFADDKRKM 450  

                   dflelnpt<-*
                   +f e+ ++   
     bm05157   451 PFTEKIMA    458  

SM00513: domain 1 of 1, from 577 to 611: score 30.4, E = 0.00024
                   *->lskLkVseLkdeLkkrGLstsGrKaeLvkRLleal<-*
                      l k++V +Lk+ ++++GL  + +K+eL++ L+++    
     bm05157   577    LGKFTVPMLKEACRAYGLKSGLKKQELLEALTKHF    611  

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