hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-23060786/chunk_1/iprscan-20080807-23060786.nocrc
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Query sequence: bm05174
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00258                                                 101.9    7.4e-26   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00258    1/1       1    60 [.     1    76 []   101.9  7.4e-26

Alignments of top-scoring domains:
SM00258: domain 1 of 1, from 1 to 60: score 101.9, E = 7.4e-26
                   *->selPvtCGavkGiLykkkFkcPGirvkCIqvedegewlTPkEFeieg
                                   Lyk+++++ G+r++CI++++  +w++P+EFe+++
     bm05174     1    -------------LYKNRLGS-GGRGRCIKQGE--NWYSPTEFEAMA 31   

                   gkgksKDWKrsIRcgGssLRtLmengtLd<-*
                   g+++sKDWKrsIR++G++L++L+++g+L+   
     bm05174    32 GRASSKDWKRSIRYAGRPLQCLIQDGILN    60   

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