hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-23364658/chunk_1/iprscan-20080807-23364658.nocrc
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Query sequence: bm05352
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00387                                                  48.9    6.8e-10   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00387      1/1      63   217 ..     1   130 []    48.9  6.8e-10

Alignments of top-scoring domains:
SM00387: domain 1 of 1, from 63 to 217: score 48.9, E = 6.8e-10
                   *->gDpdrLrqvlsNLldNAikftpegladskllsgkdgggtitvsle..
                      + +++Lr+++sN+ d   k   e+l+d+   s++d+g ++++ + ++
     bm05352    63    NKEIFLRELISNASDALDKIRYESLTDP---SKLDSGKELKIDIIpn 106  

                   ....vitVeDnGpGIppeih.k...si.edleriFepFfrtdgspsrdrp
                   ++++++t  D+G+G+++ ++ ++ ++i +   + F    +++        
     bm05352   107 pqerTLTLVDTGIGMTKADLiNnlgTIaKSGTKAFMEALQAG-------- 148  

                   gsrsrktgGGLtGLGLaivkrlvelhgGeisve.................
                    ++ + +g+  +G+G++ +  ++e+  +  + +++++   +++ +++ + 
     bm05352   149 -ADISMIGQ--FGVGFYSAYLVAEKVVVITKHNddeqyawessaggsftv 195  

                   ...........ttFtitlPlel<-*
                   + + +++ +++t+++++l+  +   
     bm05352   196 radhgepigrgTKVILHLKEDQ    217  

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