hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-23430687/chunk_1/iprscan-20080807-23430687.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: bm05381
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
SM00014                                                  49.9    3.4e-10   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
SM00014         1/1     184   296 ..     1   161 []    49.9  3.4e-10

Alignments of top-scoring domains:
SM00014: domain 1 of 1, from 184 to 296: score 49.9, E = 3.4e-10
                   *->vglllllvaavsalfnlisaiKlvfgrpRPfflslckpdhsavddtd
                       +l++ll +a +  ++++++ + +++r  P+                
     bm05381   184    EVLMNLL-LALLLDIMTVAGVQKLIKRRGPYE--------------- 214  

                   ktrtreakqisakdvcctpnfllvleagySFPSGHtafaaafalflllyl
                                  +  +  + ++ + y FP GH++ aa+++ f+l  l
     bm05381   215 ---------------MSPSLLDYLTMDIYAFPAGHASRAAMVSKFFLSHL 249  

                   paratsrgakqiSqlfrllrklliilllllalvvgfSRvylgvHypsDVl
                    ++   r                  ll l+al+vg+SRv++g+H+ +DVl
     bm05381   250 VLAVPLR-----------------VLLVLWALCVGLSRVMIGRHHVTDVL 282  

                   AGlllGilvallll<-*
                    G+++G+l + l+    
     bm05381   283 SGFVIGYLQFRLVE    296  

//