# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm05503.fasta.nr -Q bm05503.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm05503, 554 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6820278 sequences Expectation_n fit: rho(ln(x))= 5.7349+/-0.000194; mu= 9.7931+/- 0.011 mean_var=102.4469+/-19.636, 0's: 35 Z-trim: 44 B-trim: 78 in 1/65 Lambda= 0.126714 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62089252|dbj|BAD93070.1| F-box only protein 9 i ( 554) 3753 696.7 3.8e-198 gi|114607828|ref|XP_518545.2| PREDICTED: hypotheti ( 589) 3740 694.4 2.1e-197 gi|126310253|ref|XP_001370842.1| PREDICTED: hypoth ( 721) 2972 554.1 4.4e-155 gi|52545621|emb|CAB70786.2| hypothetical protein [ ( 437) 2949 549.7 5.7e-154 gi|13124238|sp|Q9UK97.1|FBX9_HUMAN F-box only prot ( 447) 2942 548.4 1.4e-153 gi|5360123|gb|AAD42880.1|AF155114_1 NY-REN-57 anti ( 434) 2923 544.9 1.5e-152 gi|149732631|ref|XP_001499178.1| PREDICTED: simila ( 442) 2799 522.2 1e-145 gi|117940157|sp|Q3ZBT2|FBX9_BOVIN F-box only prote ( 437) 2768 516.6 5.2e-144 gi|60389842|sp|Q5U2X1|FBX9_RAT F-box only protein ( 435) 2729 509.4 7.2e-142 gi|33875683|gb|AAH00650.2| F-box protein 9 [Homo s ( 403) 2724 508.5 1.3e-141 gi|194038195|ref|XP_001927508.1| PREDICTED: simila ( 493) 2712 506.4 6.8e-141 gi|18044861|gb|AAH20074.1| F-box protein 9 [Mus mu ( 436) 2709 505.8 9.1e-141 gi|148694417|gb|EDL26364.1| f-box only protein 9, ( 436) 2702 504.5 2.2e-140 gi|60390099|sp|Q8BK06|FBX9_MOUSE F-box only protei ( 437) 2702 504.5 2.2e-140 gi|149408694|ref|XP_001511077.1| PREDICTED: simila ( 524) 2687 501.8 1.7e-139 gi|148694418|gb|EDL26365.1| f-box only protein 9, ( 408) 2571 480.5 3.4e-133 gi|53135205|emb|CAG32405.1| hypothetical protein [ ( 435) 2509 469.2 9.3e-130 gi|32766465|gb|AAH54961.1| Fbxo9-prov protein [Xen ( 431) 2339 438.1 2.1e-120 gi|148694420|gb|EDL26367.1| f-box only protein 9, ( 394) 2317 434.1 3.2e-119 gi|6164737|gb|AAF04518.1|AF174597_1 F-box protein ( 327) 2232 418.5 1.3e-114 gi|73973059|ref|XP_852825.1| PREDICTED: similar to ( 327) 2183 409.5 6.6e-112 gi|90080698|dbj|BAE89830.1| unnamed protein produc ( 346) 2176 408.3 1.7e-111 gi|149019112|gb|EDL77753.1| rCG25050, isoform CRA_ ( 327) 2155 404.4 2.3e-110 gi|73973057|ref|XP_866379.1| PREDICTED: similar to ( 317) 2107 395.6 9.8e-108 gi|73973055|ref|XP_866365.1| PREDICTED: similar to ( 294) 1970 370.5 3.2e-100 gi|39645434|gb|AAH63957.1| F-box protein 9 [Danio ( 421) 1966 369.9 6.9e-100 gi|49903808|gb|AAH76528.1| F-box protein 9 [Danio ( 421) 1966 369.9 6.9e-100 gi|73973053|ref|XP_866350.1| PREDICTED: similar to ( 300) 1939 364.9 1.6e-98 gi|47228896|emb|CAG09411.1| unnamed protein produc ( 387) 1788 337.4 4e-90 gi|7670434|dbj|BAA95068.1| unnamed protein product ( 255) 1332 253.8 3.7e-65 gi|119624813|gb|EAX04408.1| F-box protein 9, isofo ( 205) 1235 236.0 6.9e-60 gi|73973049|ref|XP_866326.1| PREDICTED: similar to ( 186) 1196 228.9 9e-58 gi|156537840|ref|XP_001608090.1| PREDICTED: simila ( 433) 1107 212.9 1.3e-52 gi|91092252|ref|XP_966835.1| PREDICTED: similar to ( 388) 1068 205.7 1.7e-50 gi|38174207|gb|AAH61281.1| F-box protein 9 [Xenopu ( 214) 1004 193.8 3.7e-47 gi|148694422|gb|EDL26369.1| f-box only protein 9, ( 194) 974 188.3 1.5e-45 gi|148694419|gb|EDL26366.1| f-box only protein 9, ( 197) 973 188.1 1.8e-45 gi|12858202|dbj|BAB31231.1| unnamed protein produc ( 194) 971 187.7 2.2e-45 gi|66535489|ref|XP_397150.2| PREDICTED: similar to ( 443) 938 182.0 2.7e-43 gi|73973051|ref|XP_866339.1| PREDICTED: similar to ( 240) 875 170.3 5e-40 gi|156219015|gb|EDO39903.1| predicted protein [Nem ( 366) 863 168.2 3.1e-39 gi|167874894|gb|EDS38277.1| F-box only protein 9 [ ( 440) 864 168.5 3.1e-39 gi|157020664|gb|EAA04165.3| AGAP006784-PA [Anophel ( 442) 848 165.6 2.4e-38 gi|193659682|ref|XP_001949735.1| PREDICTED: simila ( 362) 764 150.1 8.7e-34 gi|108868580|gb|EAT32805.1| conserved hypothetical ( 353) 762 149.8 1.1e-33 gi|194142775|gb|EDW59178.1| GJ10427 [Drosophila vi ( 440) 714 141.1 5.6e-31 gi|193894098|gb|EDV92964.1| GH19048 [Drosophila gr ( 437) 709 140.2 1.1e-30 gi|119624815|gb|EAX04410.1| F-box protein 9, isofo ( 241) 705 139.2 1.1e-30 gi|193915725|gb|EDW14592.1| GI24341 [Drosophila mo ( 434) 684 135.6 2.5e-29 gi|28279221|gb|AAH45996.1| F-box protein 9 [Danio ( 334) 666 132.2 2e-28 >>gi|62089252|dbj|BAD93070.1| F-box only protein 9 isofo (554 aa) initn: 3753 init1: 3753 opt: 3753 Z-score: 3712.4 bits: 696.7 E(): 3.8e-198 Smith-Waterman score: 3753; 100.000% identity (100.000% similar) in 554 aa overlap (1-554:1-554) 10 20 30 40 50 60 bm0550 GGSSAAASGVSSRADAPVLAQSPASAGNGRPSTPRVPGSRRHPSAPRSGPLPREDGCRTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GGSSAAASGVSSRADAPVLAQSPASAGNGRPSTPRVPGSRRHPSAPRSGPLPREDGCRTP 10 20 30 40 50 60 70 80 90 100 110 120 bm0550 GPQLLPLPGALLRPRTLLSSAAETGRSRHPDTQHPSSGGRCRGGTESPSSAAGRPASMAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GPQLLPLPGALLRPRTLLSSAAETGRSRHPDTQHPSSGGRCRGGTESPSSAAGRPASMAE 70 80 90 100 110 120 130 140 150 160 170 180 bm0550 AEEDCHSDTVRADDDEENESPAETDLQAQLQMFRAQWMFELAPGVSSSNLENRPCRAARG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 AEEDCHSDTVRADDDEENESPAETDLQAQLQMFRAQWMFELAPGVSSSNLENRPCRAARG 130 140 150 160 170 180 190 200 210 220 230 240 bm0550 SLQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYEAIKFYRRAMQLVPDIEFKITY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SLQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYEAIKFYRRAMQLVPDIEFKITY 190 200 210 220 230 240 250 260 270 280 290 300 bm0550 TRSPDGDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLCQPELESSQIHISVLPM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 TRSPDGDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLCQPELESSQIHISVLPM 250 260 270 280 290 300 310 320 330 340 350 360 bm0550 EVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVWGRSCIKLVPYTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVWGRSCIKLVPYTS 310 320 330 340 350 360 370 380 390 400 410 420 bm0550 WREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYIRFFPDGHVMMLTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 WREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYIRFFPDGHVMMLTT 370 380 390 400 410 420 430 440 450 460 470 480 bm0550 PEEPQSIVPRLRTRNTRTDAILLGHYRLSQDTDNQTKVFAVITKKKEEKPLDYKYRYFRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PEEPQSIVPRLRTRNTRTDAILLGHYRLSQDTDNQTKVFAVITKKKEEKPLDYKYRYFRR 430 440 450 460 470 480 490 500 510 520 530 540 bm0550 VPVQEADQSFHVGLQLCSSGHQRFNKLIWIHHSCHITYKSTGETAVSAFEIDKMYTPLFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VPVQEADQSFHVGLQLCSSGHQRFNKLIWIHHSCHITYKSTGETAVSAFEIDKMYTPLFF 490 500 510 520 530 540 550 bm0550 ARVRSYTAFSERPL :::::::::::::: gi|620 ARVRSYTAFSERPL 550 >>gi|114607828|ref|XP_518545.2| PREDICTED: hypothetical (589 aa) initn: 3740 init1: 3740 opt: 3740 Z-score: 3699.3 bits: 694.4 E(): 2.1e-197 Smith-Waterman score: 3740; 99.639% identity (99.639% similar) in 554 aa overlap (1-554:36-589) 10 20 30 bm0550 GGSSAAASGVSSRADAPVLAQSPASAGNGR ::: :::::::::::::::::::::::::: gi|114 PTGLTRQIQTFCPSVVGPFAKVVTAPGQISGGSYAAASGVSSRADAPVLAQSPASAGNGR 10 20 30 40 50 60 40 50 60 70 80 90 bm0550 PSTPRVPGSRRHPSAPRSGPLPREDGCRTPGPQLLPLPGALLRPRTLLSSAAETGRSRHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PSTPRVPGSRRHPSAPRSGPLPREDGCRTPGPQLLPLPGALLRPRTLLSSAAETGRSRHP 70 80 90 100 110 120 100 110 120 130 140 150 bm0550 DTQHPSSGGRCRGGTESPSSAAGRPASMAEAEEDCHSDTVRADDDEENESPAETDLQAQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DTQHPSSGGRCRGGTESPSSAAGRPASMAEAEEDCHSDTVRADDDEENESPAETDLQAQL 130 140 150 160 170 180 160 170 180 190 200 210 bm0550 QMFRAQWMFELAPGVSSSNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QMFRAQWMFELAPGVSSSNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVE 190 200 210 220 230 240 220 230 240 250 260 270 bm0550 EEQNGALYEAIKFYRRAMQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLSYF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EEQNGALYEAIKFYRRAMQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLSYF 250 260 270 280 290 300 280 290 300 310 320 330 bm0550 QQQLTFQESVLKLCQPELESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGF :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|114 QQQLTFQESVLKLCQPELESSQTHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGF 310 320 330 340 350 360 340 350 360 370 380 390 bm0550 YICARDPEIWRLACLKVWGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGEQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YICARDPEIWRLACLKVWGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGEQS 370 380 390 400 410 420 400 410 420 430 440 450 bm0550 LDGFYRAWHQVEYYRYIRFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYRLSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LDGFYRAWHQVEYYRYIRFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYRLSQ 430 440 450 460 470 480 460 470 480 490 500 510 bm0550 DTDNQTKVFAVITKKKEEKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKLIWI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DTDNQTKVFAVITKKKEEKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKLIWI 490 500 510 520 530 540 520 530 540 550 bm0550 HHSCHITYKSTGETAVSAFEIDKMYTPLFFARVRSYTAFSERPL :::::::::::::::::::::::::::::::::::::::::::: gi|114 HHSCHITYKSTGETAVSAFEIDKMYTPLFFARVRSYTAFSERPL 550 560 570 580 >>gi|126310253|ref|XP_001370842.1| PREDICTED: hypothetic (721 aa) initn: 2722 init1: 2408 opt: 2972 Z-score: 2939.3 bits: 554.1 E(): 4.4e-155 Smith-Waterman score: 2972; 82.202% identity (89.908% similar) in 545 aa overlap (15-554:179-721) 10 20 30 40 bm0550 GGSSAAASGVSSRADAPVLAQSPASAGNGRPSTPRVPGSRRHPS : : :: . . : .: .: : : gi|126 GKRSATALGQAQTARRSFRRLSREARELSCDPPWLAVGVPPSQAPPPVSPPAPPPARPCS 150 160 170 180 190 200 50 60 70 80 90 100 bm0550 A-PRSGPLPREDGCRTPGPQLLPLPGALLRPRTLLSSAAETGRSRHPDTQHPSSG---GR : :::: : :.:::: :::: :::::::::::::::.:.. ..: : : : gi|126 ARPRSGALLRKDGCRPPGPQSLPLPGALLRPRTLLSQAGQRKKKRPSRDTAPLEGRGTGP 210 220 230 240 250 260 110 120 130 140 150 bm0550 CRGGTESPSSAAGRPASMAEAEED-CHSDTVRADDDEENESPAETDLQAQLQMFRAQWMF : : .:: .: : .:::::: :.::: ::.::: : :::...:::::::::::::: gi|126 ARRGEPAPSCLCAREARLAEAEEDDCRSDTKRAEDDE-NASPADANLQAQLQMFRAQWMF 270 280 290 300 310 320 160 170 180 190 200 210 bm0550 ELAPGVSSSNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYE :::::::::.::.: ...:: : :.. :::::::::::::::::::::::::::::::: gi|126 ELAPGVSSSGLETRSSKGTRGPLVKAT-DTKGKQEQAKEEKARELFLKAVEEEQNGALYE 330 340 350 360 370 380 220 230 240 250 260 270 bm0550 AIKFYRRAMQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQES :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|126 AIKFYRRAMQLVPDIEFKITYNRSPDGDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQES 390 400 410 420 430 440 280 290 300 310 320 330 bm0550 VLKLCQPELESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEI .::::::::...: :::::::::::::::::::::::::::::::::::::::::::::: gi|126 LLKLCQPELDTTQTHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEI 450 460 470 480 490 500 340 350 360 370 380 390 bm0550 WRLACLKVWGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 WRLACLKVWGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWH 510 520 530 540 550 560 400 410 420 430 440 450 bm0550 QVEYYRYIRFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYRLSQDTDNQTKVF :::::::.::::::.::.::::::::::::::::.:.::::::::::::::::::::::: gi|126 QVEYYRYMRFFPDGQVMVLTTPEEPQSIVPRLRTKNSRTDAILLGHYRLSQDTDNQTKVF 570 580 590 600 610 620 460 470 480 490 500 510 bm0550 AVITKKKEEKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKLIWIHHSCHITYK :::::::::::.::::::::::::::.:::::::::::::::::::::.::::::::::: gi|126 AVITKKKEEKPIDYKYRYFRRVPVQETDQSFHVGLQLCSSGHQRFNKLVWIHHSCHITYK 630 640 650 660 670 680 520 530 540 550 bm0550 STGETAVSAFEIDKMYTPLFFARVRSYTAFSERPL :::::::.::::::::::::::::.:.:::::.:: gi|126 STGETAVTAFEIDKMYTPLFFARVKSFTAFSEKPL 690 700 710 720 >>gi|52545621|emb|CAB70786.2| hypothetical protein [Homo (437 aa) initn: 2949 init1: 2949 opt: 2949 Z-score: 2919.4 bits: 549.7 E(): 5.7e-154 Smith-Waterman score: 2949; 100.000% identity (100.000% similar) in 437 aa overlap (118-554:1-437) 90 100 110 120 130 140 bm0550 RHPDTQHPSSGGRCRGGTESPSSAAGRPASMAEAEEDCHSDTVRADDDEENESPAETDLQ :::::::::::::::::::::::::::::: gi|525 MAEAEEDCHSDTVRADDDEENESPAETDLQ 10 20 30 150 160 170 180 190 200 bm0550 AQLQMFRAQWMFELAPGVSSSNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 AQLQMFRAQWMFELAPGVSSSNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLK 40 50 60 70 80 90 210 220 230 240 250 260 bm0550 AVEEEQNGALYEAIKFYRRAMQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 AVEEEQNGALYEAIKFYRRAMQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLL 100 110 120 130 140 150 270 280 290 300 310 320 bm0550 SYFQQQLTFQESVLKLCQPELESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 SYFQQQLTFQESVLKLCQPELESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVC 160 170 180 190 200 210 330 340 350 360 370 380 bm0550 RGFYICARDPEIWRLACLKVWGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 RGFYICARDPEIWRLACLKVWGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQG 220 230 240 250 260 270 390 400 410 420 430 440 bm0550 EQSLDGFYRAWHQVEYYRYIRFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 EQSLDGFYRAWHQVEYYRYIRFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYR 280 290 300 310 320 330 450 460 470 480 490 500 bm0550 LSQDTDNQTKVFAVITKKKEEKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 LSQDTDNQTKVFAVITKKKEEKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKL 340 350 360 370 380 390 510 520 530 540 550 bm0550 IWIHHSCHITYKSTGETAVSAFEIDKMYTPLFFARVRSYTAFSERPL ::::::::::::::::::::::::::::::::::::::::::::::: gi|525 IWIHHSCHITYKSTGETAVSAFEIDKMYTPLFFARVRSYTAFSERPL 400 410 420 430 >>gi|13124238|sp|Q9UK97.1|FBX9_HUMAN F-box only protein (447 aa) initn: 2942 init1: 2942 opt: 2942 Z-score: 2912.4 bits: 548.4 E(): 1.4e-153 Smith-Waterman score: 2942; 100.000% identity (100.000% similar) in 436 aa overlap (119-554:12-447) 90 100 110 120 130 140 bm0550 HPDTQHPSSGGRCRGGTESPSSAAGRPASMAEAEEDCHSDTVRADDDEENESPAETDLQA :::::::::::::::::::::::::::::: gi|131 MPDIIWVFPPQAEAEEDCHSDTVRADDDEENESPAETDLQA 10 20 30 40 150 160 170 180 190 200 bm0550 QLQMFRAQWMFELAPGVSSSNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 QLQMFRAQWMFELAPGVSSSNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKA 50 60 70 80 90 100 210 220 230 240 250 260 bm0550 VEEEQNGALYEAIKFYRRAMQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 VEEEQNGALYEAIKFYRRAMQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLS 110 120 130 140 150 160 270 280 290 300 310 320 bm0550 YFQQQLTFQESVLKLCQPELESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 YFQQQLTFQESVLKLCQPELESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCR 170 180 190 200 210 220 330 340 350 360 370 380 bm0550 GFYICARDPEIWRLACLKVWGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 GFYICARDPEIWRLACLKVWGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGE 230 240 250 260 270 280 390 400 410 420 430 440 bm0550 QSLDGFYRAWHQVEYYRYIRFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 QSLDGFYRAWHQVEYYRYIRFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYRL 290 300 310 320 330 340 450 460 470 480 490 500 bm0550 SQDTDNQTKVFAVITKKKEEKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 SQDTDNQTKVFAVITKKKEEKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKLI 350 360 370 380 390 400 510 520 530 540 550 bm0550 WIHHSCHITYKSTGETAVSAFEIDKMYTPLFFARVRSYTAFSERPL :::::::::::::::::::::::::::::::::::::::::::::: gi|131 WIHHSCHITYKSTGETAVSAFEIDKMYTPLFFARVRSYTAFSERPL 410 420 430 440 >>gi|5360123|gb|AAD42880.1|AF155114_1 NY-REN-57 antigen (434 aa) initn: 2923 init1: 2923 opt: 2923 Z-score: 2893.8 bits: 544.9 E(): 1.5e-152 Smith-Waterman score: 2923; 100.000% identity (100.000% similar) in 430 aa overlap (5-434:1-430) 10 20 30 40 50 60 bm0550 GGSSAAASGVSSRADAPVLAQSPASAGNGRPSTPRVPGSRRHPSAPRSGPLPREDGCRTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|536 AAASGVSSRADAPVLAQSPASAGNGRPSTPRVPGSRRHPSAPRSGPLPREDGCRTP 10 20 30 40 50 70 80 90 100 110 120 bm0550 GPQLLPLPGALLRPRTLLSSAAETGRSRHPDTQHPSSGGRCRGGTESPSSAAGRPASMAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|536 GPQLLPLPGALLRPRTLLSSAAETGRSRHPDTQHPSSGGRCRGGTESPSSAAGRPASMAE 60 70 80 90 100 110 130 140 150 160 170 180 bm0550 AEEDCHSDTVRADDDEENESPAETDLQAQLQMFRAQWMFELAPGVSSSNLENRPCRAARG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|536 AEEDCHSDTVRADDDEENESPAETDLQAQLQMFRAQWMFELAPGVSSSNLENRPCRAARG 120 130 140 150 160 170 190 200 210 220 230 240 bm0550 SLQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYEAIKFYRRAMQLVPDIEFKITY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|536 SLQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYEAIKFYRRAMQLVPDIEFKITY 180 190 200 210 220 230 250 260 270 280 290 300 bm0550 TRSPDGDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLCQPELESSQIHISVLPM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|536 TRSPDGDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLCQPELESSQIHISVLPM 240 250 260 270 280 290 310 320 330 340 350 360 bm0550 EVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVWGRSCIKLVPYTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|536 EVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVWGRSCIKLVPYTS 300 310 320 330 340 350 370 380 390 400 410 420 bm0550 WREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYIRFFPDGHVMMLTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|536 WREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYIRFFPDGHVMMLTT 360 370 380 390 400 410 430 440 450 460 470 480 bm0550 PEEPQSIVPRLRTRNTRTDAILLGHYRLSQDTDNQTKVFAVITKKKEEKPLDYKYRYFRR :::::::::::::: gi|536 PEEPQSIVPRLRTREYQD 420 430 >>gi|149732631|ref|XP_001499178.1| PREDICTED: similar to (442 aa) initn: 2739 init1: 2358 opt: 2799 Z-score: 2771.2 bits: 522.2 E(): 1e-145 Smith-Waterman score: 2799; 95.011% identity (96.599% similar) in 441 aa overlap (119-554:3-442) 90 100 110 120 130 140 bm0550 HPDTQHPSSGGRCRGGTESPSSAAGRPASMAEAEEDCHSDTVRADDDEENESPAETDLQA :::::::::::::: : :::::::::::: gi|149 MEAEAEEDCHSDTVRAGGDAENESPAETDLQA 10 20 30 150 160 170 180 190 200 bm0550 QLQMFRAQWMFELAPGVSSSNLENRPCRAARGSLQKTSADTKGKQEQAKEEK-----ARE :::::::::::::::::.:::::.:::: ::::: : .:::::::: ::::: ::: gi|149 QLQMFRAQWMFELAPGVGSSNLETRPCRPARGSLLK-AADTKGKQELAKEEKLSIMGARE 40 50 60 70 80 90 210 220 230 240 250 260 bm0550 LFLKAVEEEQNGALYEAIKFYRRAMQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LFLKAVEEEQNGALYEAIKFYRRAMQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKM 100 110 120 130 140 150 270 280 290 300 310 320 bm0550 ADLLSYFQQQLTFQESVLKLCQPELESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQL ::::: ::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|149 ADLLSCFQQQLTFQESVLKLCQPELESSQTHISVLPMEVLMYIFRWVVSSDLDLRSLEQL 160 170 180 190 200 210 330 340 350 360 370 380 bm0550 SLVCRGFYICARDPEIWRLACLKVWGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTY : ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SQVCRGFYVCARDPEIWRLACLKVWGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTY 220 230 240 250 260 270 390 400 410 420 430 440 bm0550 IRQGEQSLDGFYRAWHQVEYYRYIRFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IRQGEQSLDGFYRAWHQVEYYRYIRFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILL 280 290 300 310 320 330 450 460 470 480 490 500 bm0550 GHYRLSQDTDNQTKVFAVITKKKEEKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQR :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|149 GHYRLSQDTDNQTKVFAVITKKKEEKPLDYKYRYFRRVPVQEAEQSFHVGLQLCSSGHQR 340 350 360 370 380 390 510 520 530 540 550 bm0550 FNKLIWIHHSCHITYKSTGETAVSAFEIDKMYTPLFFARVRSYTAFSERPL :::::::::::::::::::::::.:::::::::::::::::::::.::::: gi|149 FNKLIWIHHSCHITYKSTGETAVTAFEIDKMYTPLFFARVRSYTALSERPL 400 410 420 430 440 >>gi|117940157|sp|Q3ZBT2|FBX9_BOVIN F-box only protein 9 (437 aa) initn: 2439 init1: 2439 opt: 2768 Z-score: 2740.6 bits: 516.6 E(): 5.2e-144 Smith-Waterman score: 2768; 93.607% identity (97.717% similar) in 438 aa overlap (118-554:1-437) 90 100 110 120 130 140 bm0550 RHPDTQHPSSGGRCRGGTESPSSAAGRPASMAEAEEDCHSDTVR-ADDDEENESPAETDL ::::::::::..:: .:::.:::::::::: gi|117 MAEAEEDCHSEAVREGDDDDENESPAETDL 10 20 30 150 160 170 180 190 200 bm0550 QAQLQMFRAQWMFELAPGVSSSNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFL ::::: :::::::::::: .:.:::.:::::::::: . .:::.:::: ::::::::::: gi|117 QAQLQRFRAQWMFELAPGGGSGNLESRPCRAARGSLLR-AADTRGKQELAKEEKARELFL 40 50 60 70 80 210 220 230 240 250 260 bm0550 KAVEEEQNGALYEAIKFYRRAMQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADL ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|117 KAVEEEQNGALYEAIKFYRRAMQLVPDIEFKITYTRSPDGDGVGNSYIEDTDDDSKMADL 90 100 110 120 130 140 270 280 290 300 310 320 bm0550 LSYFQQQLTFQESVLKLCQPELESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLV :::::::::::::::::::::::::: :::.::::::::::::::::::::::::::: : gi|117 LSYFQQQLTFQESVLKLCQPELESSQTHISALPMEVLMYIFRWVVSSDLDLRSLEQLSQV 150 160 170 180 190 200 330 340 350 360 370 380 bm0550 CRGFYICARDPEIWRLACLKVWGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 CRGFYICARDPEIWRLACLKVWGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQ 210 220 230 240 250 260 390 400 410 420 430 440 bm0550 GEQSLDGFYRAWHQVEYYRYIRFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHY ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|117 GEQSLDGFYRAWHQVEYYRYVRFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHY 270 280 290 300 310 320 450 460 470 480 490 500 bm0550 RLSQDTDNQTKVFAVITKKKEEKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNK ::::::::::::::::::::::: ::.:::::::.:::::::.::::::::::::: ::: gi|117 RLSQDTDNQTKVFAVITKKKEEKALDHKYRYFRRAPVQEADQNFHVGLQLCSSGHQSFNK 330 340 350 360 370 380 510 520 530 540 550 bm0550 LIWIHHSCHITYKSTGETAVSAFEIDKMYTPLFFARVRSYTAFSERPL ::::::::::::::::::::.:::::::::::.::::::::::::::: gi|117 LIWIHHSCHITYKSTGETAVTAFEIDKMYTPLLFARVRSYTAFSERPL 390 400 410 420 430 >>gi|60389842|sp|Q5U2X1|FBX9_RAT F-box only protein 9 (435 aa) initn: 2468 init1: 2382 opt: 2729 Z-score: 2702.1 bits: 509.4 E(): 7.2e-142 Smith-Waterman score: 2729; 91.991% identity (97.712% similar) in 437 aa overlap (118-554:1-435) 90 100 110 120 130 140 bm0550 RHPDTQHPSSGGRCRGGTESPSSAAGRPASMAEAEEDCHSDTVRADDDEENESPAETDLQ :::::::::::.::. : : .::::: ::: gi|603 MAEAEEDCHSDAVRVGD-EGHESPAERDLQ 10 20 150 160 170 180 190 200 bm0550 AQLQMFRAQWMFELAPGVSSSNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLK ::::::::::::::.:::.:::.:.:::::.:.:. :..:: ::.:: :::::::::::: gi|603 AQLQMFRAQWMFELTPGVGSSNVESRPCRAGRSSILKAAAD-KGRQELAKEEKARELFLK 30 40 50 60 70 80 210 220 230 240 250 260 bm0550 AVEEEQNGALYEAIKFYRRAMQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLL :::::::::::::::::::::::::::::::::::::::::::.::::::.: ::::::: gi|603 AVEEEQNGALYEAIKFYRRAMQLVPDIEFKITYTRSPDGDGVGSSYIEDNEDASKMADLL 90 100 110 120 130 140 270 280 290 300 310 320 bm0550 SYFQQQLTFQESVLKLCQPELESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVC ::::::::::::::::::::::.:: :::::::::::::::::::::::::::::::::: gi|603 SYFQQQLTFQESVLKLCQPELETSQTHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVC 150 160 170 180 190 200 330 340 350 360 370 380 bm0550 RGFYICARDPEIWRLACLKVWGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQG :::::::::::::::::::::::::.::::..:::::::::::::::::::::::::::: gi|603 RGFYICARDPEIWRLACLKVWGRSCMKLVPFSSWREMFLERPRVRFDGVYISKTTYIRQG 210 220 230 240 250 260 390 400 410 420 430 440 bm0550 EQSLDGFYRAWHQVEYYRYIRFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYR ::::::::::::::::::::::::::::::::::::: :::::::::::::::::::::: gi|603 EQSLDGFYRAWHQVEYYRYIRFFPDGHVMMLTTPEEPPSIVPRLRTRNTRTDAILLGHYR 270 280 290 300 310 320 450 460 470 480 490 500 bm0550 LSQDTDNQTKVFAVITKKKEEKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKL ::::.::::::::::::::::::::.::::::::::::::..:::::::::::::::::: gi|603 LSQDADNQTKVFAVITKKKEEKPLDHKYRYFRRVPVQEADHNFHVGLQLCSSGHQRFNKL 330 340 350 360 370 380 510 520 530 540 550 bm0550 IWIHHSCHITYKSTGETAVSAFEIDKMYTPLFFARVRSYTAFSERPL :::::::::::.::::::::::.:::::::::::::::::::::::: gi|603 IWIHHSCHITYRSTGETAVSAFDIDKMYTPLFFARVRSYTAFSERPL 390 400 410 420 430 >>gi|33875683|gb|AAH00650.2| F-box protein 9 [Homo sapie (403 aa) initn: 2724 init1: 2724 opt: 2724 Z-score: 2697.6 bits: 508.5 E(): 1.3e-141 Smith-Waterman score: 2724; 100.000% identity (100.000% similar) in 403 aa overlap (152-554:1-403) 130 140 150 160 170 180 bm0550 EEDCHSDTVRADDDEENESPAETDLQAQLQMFRAQWMFELAPGVSSSNLENRPCRAARGS :::::::::::::::::::::::::::::: gi|338 MFRAQWMFELAPGVSSSNLENRPCRAARGS 10 20 30 190 200 210 220 230 240 bm0550 LQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYEAIKFYRRAMQLVPDIEFKITYT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|338 LQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYEAIKFYRRAMQLVPDIEFKITYT 40 50 60 70 80 90 250 260 270 280 290 300 bm0550 RSPDGDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLCQPELESSQIHISVLPME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|338 RSPDGDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLCQPELESSQIHISVLPME 100 110 120 130 140 150 310 320 330 340 350 360 bm0550 VLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVWGRSCIKLVPYTSW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|338 VLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVWGRSCIKLVPYTSW 160 170 180 190 200 210 370 380 390 400 410 420 bm0550 REMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYIRFFPDGHVMMLTTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|338 REMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYIRFFPDGHVMMLTTP 220 230 240 250 260 270 430 440 450 460 470 480 bm0550 EEPQSIVPRLRTRNTRTDAILLGHYRLSQDTDNQTKVFAVITKKKEEKPLDYKYRYFRRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|338 EEPQSIVPRLRTRNTRTDAILLGHYRLSQDTDNQTKVFAVITKKKEEKPLDYKYRYFRRV 280 290 300 310 320 330 490 500 510 520 530 540 bm0550 PVQEADQSFHVGLQLCSSGHQRFNKLIWIHHSCHITYKSTGETAVSAFEIDKMYTPLFFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|338 PVQEADQSFHVGLQLCSSGHQRFNKLIWIHHSCHITYKSTGETAVSAFEIDKMYTPLFFA 340 350 360 370 380 390 550 bm0550 RVRSYTAFSERPL ::::::::::::: gi|338 RVRSYTAFSERPL 400 554 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Thu Aug 7 23:53:40 2008 done: Thu Aug 7 23:55:56 2008 Total Scan time: 904.350 Total Display time: 0.160 Function used was FASTA [version 34.26.5 April 26, 2007]