# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm05505.fasta.nr -Q bm05505.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm05505, 374 aa vs /cdna2/lib/nr/nr library 3020366983 residues in 8842601 sequences statistics sampled from 60000 to 8839109 sequences Expectation_n fit: rho(ln(x))= 5.4749+/-0.000186; mu= 9.1357+/- 0.010 mean_var=82.3618+/-15.805, 0's: 38 Z-trim: 60 B-trim: 0 in 0/65 Lambda= 0.141322 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8842601) gi|12585260|sp|Q9P0M6.3|H2AW_HUMAN RecName: Full=C ( 372) 2370 492.7 6.1e-137 gi|194042746|ref|XP_001927061.1| PREDICTED: simila ( 372) 2367 492.0 9.3e-137 gi|109089456|ref|XP_001109286.1| PREDICTED: core h ( 372) 2365 491.6 1.2e-136 gi|94534822|gb|AAI16137.1| H2A histone family, mem ( 372) 2362 491.0 1.9e-136 gi|73952825|ref|XP_861204.1| PREDICTED: similar to ( 372) 2355 489.6 5.1e-136 gi|90085317|dbj|BAE91399.1| unnamed protein produc ( 372) 2355 489.6 5.1e-136 gi|194205965|ref|XP_001503760.2| PREDICTED: simila ( 373) 2346 487.8 1.8e-135 gi|90101334|sp|Q8CCK0.3|H2AW_MOUSE RecName: Full=C ( 372) 2334 485.3 9.9e-135 gi|26328449|dbj|BAC27963.1| unnamed protein produc ( 372) 2330 484.5 1.7e-134 gi|74228084|dbj|BAE38003.1| unnamed protein produc ( 372) 2329 484.3 2e-134 gi|73952821|ref|XP_850298.1| PREDICTED: similar to ( 372) 2316 481.6 1.3e-133 gi|114630947|ref|XP_001170515.1| PREDICTED: simila ( 372) 2315 481.4 1.4e-133 gi|109089458|ref|XP_001109179.1| PREDICTED: core h ( 372) 2311 480.6 2.6e-133 gi|224052145|ref|XP_002193756.1| PREDICTED: H2A hi ( 372) 2175 452.9 5.7e-125 gi|118092641|ref|XP_421598.2| PREDICTED: similar t ( 372) 2172 452.3 8.7e-125 gi|26347279|dbj|BAC37288.1| unnamed protein produc ( 356) 2129 443.5 3.6e-122 gi|109089454|ref|XP_001109123.1| PREDICTED: H2A hi ( 343) 2032 423.7 3.2e-116 gi|149635027|ref|XP_001508461.1| PREDICTED: hypoth ( 342) 1985 414.1 2.4e-113 gi|49115274|gb|AAH73272.1| MGC80637 protein [Xenop ( 371) 1905 397.8 2.1e-108 gi|49900191|gb|AAH76893.1| H2A histone [Xenopus tr ( 372) 1904 397.6 2.4e-108 gi|33416694|gb|AAH56065.1| H2afy2-prov protein [Xe ( 371) 1891 395.0 1.5e-107 gi|66911347|gb|AAH97115.1| Zgc:114051 [Danio rerio ( 367) 1766 369.5 7.1e-100 gi|10433885|dbj|BAB14049.1| unnamed protein produc ( 280) 1759 368.0 1.6e-99 gi|209155000|gb|ACI33732.1| Core histone macro-H2A ( 371) 1749 366.0 7.9e-99 gi|221220522|gb|ACM08922.1| Core histone macro-H2A ( 371) 1748 365.8 9.1e-99 gi|12856069|dbj|BAB30555.1| unnamed protein produc ( 382) 1679 351.8 1.6e-94 gi|114601789|ref|XP_001168507.1| PREDICTED: simila ( 380) 1664 348.7 1.3e-93 gi|126290045|ref|XP_001365313.1| PREDICTED: simila ( 373) 1657 347.3 3.5e-93 gi|126290042|ref|XP_001365244.1| PREDICTED: simila ( 372) 1640 343.8 3.9e-92 gi|73971330|ref|XP_538635.2| PREDICTED: similar to ( 412) 1640 343.9 4.2e-92 gi|90110023|sp|O75367.4|H2AY_HUMAN RecName: Full=C ( 372) 1639 343.6 4.5e-92 gi|81869559|sp|Q9QZQ8.3|H2AY_MOUSE RecName: Full=C ( 372) 1636 343.0 6.8e-92 gi|3341992|gb|AAC39908.1| histone macroH2A1.2 [Hom ( 371) 1634 342.6 9.1e-92 gi|87578157|gb|AAI13288.1| H2A histone family, mem ( 371) 1634 342.6 9.1e-92 gi|10435335|dbj|BAB14565.1| unnamed protein produc ( 372) 1633 342.4 1e-91 gi|90110024|sp|Q02874.4|H2AY_RAT RecName: Full=Cor ( 371) 1630 341.8 1.6e-91 gi|63100748|gb|AAH95406.1| H2A histone family, mem ( 372) 1630 341.8 1.6e-91 gi|3493529|gb|AAC33433.1| histone macroH2A1.2 [Hom ( 372) 1630 341.8 1.6e-91 gi|82190792|sp|O93327.3|H2AY_CHICK RecName: Full=C ( 372) 1629 341.6 1.8e-91 gi|149726345|ref|XP_001504412.1| PREDICTED: simila ( 372) 1628 341.4 2.1e-91 gi|32492946|gb|AAN08620.1| medulloblastoma antigen ( 366) 1615 338.7 1.3e-90 gi|114601791|ref|XP_001168478.1| PREDICTED: simila ( 371) 1613 338.3 1.8e-90 gi|114601787|ref|XP_001168453.1| PREDICTED: simila ( 370) 1589 333.4 5.2e-89 gi|126290039|ref|XP_001365186.1| PREDICTED: simila ( 369) 1588 333.2 6e-89 gi|3493531|gb|AAC33434.1| histone macroH2A1.1 [Hom ( 369) 1587 333.0 6.9e-89 gi|119582624|gb|EAW62220.1| H2A histone family, me ( 368) 1582 332.0 1.4e-88 gi|13905316|gb|AAH06955.1| H2afy protein [Mus musc ( 369) 1581 331.8 1.6e-88 gi|86373534|gb|AAA41561.2| histone H2A.1 [Rattus n ( 368) 1578 331.2 2.5e-88 gi|90076556|dbj|BAE87958.1| unnamed protein produc ( 368) 1576 330.8 3.3e-88 gi|58403354|gb|AAH89240.1| H2afy protein [Xenopus ( 369) 1575 330.6 3.8e-88 >>gi|12585260|sp|Q9P0M6.3|H2AW_HUMAN RecName: Full=Core (372 aa) initn: 2370 init1: 2370 opt: 2370 Z-score: 2615.7 bits: 492.7 E(): 6.1e-137 Smith-Waterman score: 2370; 100.000% identity (100.000% similar) in 372 aa overlap (3-374:1-372) 10 20 30 40 50 60 bm0550 SKMSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 MSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAA 10 20 30 40 50 70 80 90 100 110 120 bm0550 EILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 EILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKR 60 70 80 90 100 110 130 140 150 160 170 180 bm0550 GTKGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 GTKGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDG 120 130 140 150 160 170 190 200 210 220 230 240 bm0550 PGDGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 PGDGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGG 180 190 200 210 220 230 250 260 270 280 290 300 bm0550 KEFLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 KEFLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCL 240 250 260 270 280 290 310 320 330 340 350 360 bm0550 SAAEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 SAAEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSES 300 310 320 330 340 350 370 bm0550 IGIYVQEMAKLDAK :::::::::::::: gi|125 IGIYVQEMAKLDAK 360 370 >>gi|194042746|ref|XP_001927061.1| PREDICTED: similar to (372 aa) initn: 2367 init1: 2367 opt: 2367 Z-score: 2612.4 bits: 492.0 E(): 9.3e-137 Smith-Waterman score: 2367; 99.731% identity (100.000% similar) in 372 aa overlap (3-374:1-372) 10 20 30 40 50 60 bm0550 SKMSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 MSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAA 10 20 30 40 50 70 80 90 100 110 120 bm0550 EILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 EILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKR 60 70 80 90 100 110 130 140 150 160 170 180 bm0550 GTKGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDG :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|194 GTKGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRSSKKSKPKDSDKEGTSNSTSEDG 120 130 140 150 160 170 190 200 210 220 230 240 bm0550 PGDGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PGDGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGG 180 190 200 210 220 230 250 260 270 280 290 300 bm0550 KEFLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KEFLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCL 240 250 260 270 280 290 310 320 330 340 350 360 bm0550 SAAEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SAAEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSES 300 310 320 330 340 350 370 bm0550 IGIYVQEMAKLDAK :::::::::::::: gi|194 IGIYVQEMAKLDAK 360 370 >>gi|109089456|ref|XP_001109286.1| PREDICTED: core histo (372 aa) initn: 2399 init1: 2365 opt: 2365 Z-score: 2610.2 bits: 491.6 E(): 1.2e-136 Smith-Waterman score: 2365; 99.731% identity (100.000% similar) in 372 aa overlap (3-374:1-372) 10 20 30 40 50 60 bm0550 SKMSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAA 10 20 30 40 50 70 80 90 100 110 120 bm0550 EILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKR 60 70 80 90 100 110 130 140 150 160 170 180 bm0550 GTKGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GTKGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDG 120 130 140 150 160 170 190 200 210 220 230 240 bm0550 PGDGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PGDGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGG 180 190 200 210 220 230 250 260 270 280 290 300 bm0550 KEFLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KEFLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCL 240 250 260 270 280 290 310 320 330 340 350 360 bm0550 SAAEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SAAEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSES 300 310 320 330 340 350 370 bm0550 IGIYVQEMAKLDAK ::::::::::::.: gi|109 IGIYVQEMAKLDTK 360 370 >>gi|94534822|gb|AAI16137.1| H2A histone family, member (372 aa) initn: 2362 init1: 2362 opt: 2362 Z-score: 2606.9 bits: 491.0 E(): 1.9e-136 Smith-Waterman score: 2362; 99.731% identity (100.000% similar) in 372 aa overlap (3-374:1-372) 10 20 30 40 50 60 bm0550 SKMSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|945 MSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAA 10 20 30 40 50 70 80 90 100 110 120 bm0550 EILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|945 EILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKR 60 70 80 90 100 110 130 140 150 160 170 180 bm0550 GTKGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDG :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|945 GTKAKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDG 120 130 140 150 160 170 190 200 210 220 230 240 bm0550 PGDGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|945 PGDGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGG 180 190 200 210 220 230 250 260 270 280 290 300 bm0550 KEFLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|945 KEFLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCL 240 250 260 270 280 290 310 320 330 340 350 360 bm0550 SAAEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|945 SAAEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSES 300 310 320 330 340 350 370 bm0550 IGIYVQEMAKLDAK :::::::::::::: gi|945 IGIYVQEMAKLDAK 360 370 >>gi|73952825|ref|XP_861204.1| PREDICTED: similar to Cor (372 aa) initn: 2355 init1: 2355 opt: 2355 Z-score: 2599.2 bits: 489.6 E(): 5.1e-136 Smith-Waterman score: 2355; 99.194% identity (100.000% similar) in 372 aa overlap (3-374:1-372) 10 20 30 40 50 60 bm0550 SKMSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAA 10 20 30 40 50 70 80 90 100 110 120 bm0550 EILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 EILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKR 60 70 80 90 100 110 130 140 150 160 170 180 bm0550 GTKGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDG :::::::.:::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|739 GTKGKSEAILSPPPEKRGRKAASGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDG 120 130 140 150 160 170 190 200 210 220 230 240 bm0550 PGDGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PGDGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGG 180 190 200 210 220 230 250 260 270 280 290 300 bm0550 KEFLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KEFLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCL 240 250 260 270 280 290 310 320 330 340 350 360 bm0550 SAAEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSES ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|739 SAAEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSTSSLKNVYFLLFDSES 300 310 320 330 340 350 370 bm0550 IGIYVQEMAKLDAK :::::::::::::: gi|739 IGIYVQEMAKLDAK 360 370 >>gi|90085317|dbj|BAE91399.1| unnamed protein product [M (372 aa) initn: 2388 init1: 2355 opt: 2355 Z-score: 2599.2 bits: 489.6 E(): 5.1e-136 Smith-Waterman score: 2355; 99.194% identity (100.000% similar) in 372 aa overlap (3-374:1-372) 10 20 30 40 50 60 bm0550 SKMSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAA ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 MSGRSGKKEMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAA 10 20 30 40 50 70 80 90 100 110 120 bm0550 EILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 EILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKR 60 70 80 90 100 110 130 140 150 160 170 180 bm0550 GTKGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDG ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|900 GTKGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDEEGTSNSTSEDG 120 130 140 150 160 170 190 200 210 220 230 240 bm0550 PGDGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 PGDGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGG 180 190 200 210 220 230 250 260 270 280 290 300 bm0550 KEFLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 KEFLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCL 240 250 260 270 280 290 310 320 330 340 350 360 bm0550 SAAEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|900 SAAEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSES 300 310 320 330 340 350 370 bm0550 IGIYVQEMAKLDAK ::::::::::::.: gi|900 IGIYVQEMAKLDTK 360 370 >>gi|194205965|ref|XP_001503760.2| PREDICTED: similar to (373 aa) initn: 2333 init1: 2012 opt: 2346 Z-score: 2589.2 bits: 487.8 E(): 1.8e-135 Smith-Waterman score: 2346; 98.928% identity (99.732% similar) in 373 aa overlap (3-374:1-373) 10 20 30 40 50 60 bm0550 SKMSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 MSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAA 10 20 30 40 50 70 80 90 100 110 120 bm0550 EILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 EILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKR 60 70 80 90 100 110 130 140 150 160 170 180 bm0550 GTKGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|194 GTKGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTTEDG 120 130 140 150 160 170 190 200 210 220 230 240 bm0550 PGDGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PGDGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGG 180 190 200 210 220 230 250 260 270 280 290 300 bm0550 KEFLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KEFLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCL 240 250 260 270 280 290 310 320 330 340 350 bm0550 SAAEDKKLKSVAFPPFPS-GRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSE :::::::::::::::::: :.::::::::::::::::::::::::::::::::::::::: gi|194 SAAEDKKLKSVAFPPFPSAGKNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSE 300 310 320 330 340 350 360 370 bm0550 SIGIYVQEMAKLDAK :::::::::::::.: gi|194 SIGIYVQEMAKLDTK 360 370 >>gi|90101334|sp|Q8CCK0.3|H2AW_MOUSE RecName: Full=Core (372 aa) initn: 2372 init1: 2334 opt: 2334 Z-score: 2576.0 bits: 485.3 E(): 9.9e-135 Smith-Waterman score: 2334; 98.387% identity (99.731% similar) in 372 aa overlap (3-374:1-372) 10 20 30 40 50 60 bm0550 SKMSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 MSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAA 10 20 30 40 50 70 80 90 100 110 120 bm0550 EILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 EILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKR 60 70 80 90 100 110 130 140 150 160 170 180 bm0550 GTKGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDG :::::::::::::::::::::.:::::::::::.::::::::: :::::::::::::::: gi|901 GTKGKSETILSPPPEKRGRKAASGKKGGKKSKATKPRTSKKSKAKDSDKEGTSNSTSEDG 120 130 140 150 160 170 190 200 210 220 230 240 bm0550 PGDGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGG :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|901 PGDGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEEIGKALEKAGG 180 190 200 210 220 230 250 260 270 280 290 300 bm0550 KEFLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|901 KEFLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCL 240 250 260 270 280 290 310 320 330 340 350 360 bm0550 SAAEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSES ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|901 SAAEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSSSSLKNVYFLLFDSES 300 310 320 330 340 350 370 bm0550 IGIYVQEMAKLDAK ::::::::::::.: gi|901 IGIYVQEMAKLDTK 360 370 >>gi|26328449|dbj|BAC27963.1| unnamed protein product [M (372 aa) initn: 2368 init1: 2330 opt: 2330 Z-score: 2571.6 bits: 484.5 E(): 1.7e-134 Smith-Waterman score: 2330; 98.118% identity (99.731% similar) in 372 aa overlap (3-374:1-372) 10 20 30 40 50 60 bm0550 SKMSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 MSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAA 10 20 30 40 50 70 80 90 100 110 120 bm0550 EILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKR :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|263 EILELAGNAARDNKKARIAPRHILLAVANDEDLNQLLKGVTIASGGVLPRIHPELLAKKR 60 70 80 90 100 110 130 140 150 160 170 180 bm0550 GTKGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDG :::::::::::::::::::::.:::::::::::.::::::::: :::::::::::::::: gi|263 GTKGKSETILSPPPEKRGRKAASGKKGGKKSKATKPRTSKKSKAKDSDKEGTSNSTSEDG 120 130 140 150 160 170 190 200 210 220 230 240 bm0550 PGDGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGG :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|263 PGDGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEEIGKALEKAGG 180 190 200 210 220 230 250 260 270 280 290 300 bm0550 KEFLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 KEFLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCL 240 250 260 270 280 290 310 320 330 340 350 360 bm0550 SAAEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSES ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|263 SAAEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSSSSLKNVYFLLFDSES 300 310 320 330 340 350 370 bm0550 IGIYVQEMAKLDAK ::::::::::::.: gi|263 IGIYVQEMAKLDTK 360 370 >>gi|74228084|dbj|BAE38003.1| unnamed protein product [M (372 aa) initn: 2367 init1: 2329 opt: 2329 Z-score: 2570.5 bits: 484.3 E(): 2e-134 Smith-Waterman score: 2329; 98.118% identity (99.731% similar) in 372 aa overlap (3-374:1-372) 10 20 30 40 50 60 bm0550 SKMSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 MSGRSGKKKMSKLSRSARAGVIFPVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAA 10 20 30 40 50 70 80 90 100 110 120 bm0550 EILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 EILELAGNAARDNKKARIAPRHILLAVANDEELNQLLKGVTIASGGVLPRIHPELLAKKR 60 70 80 90 100 110 130 140 150 160 170 180 bm0550 GTKGKSETILSPPPEKRGRKATSGKKGGKKSKAAKPRTSKKSKPKDSDKEGTSNSTSEDG :::::::::::::::::::::.:::::::::::.::::::::: :::::::::::::::: gi|742 GTKGKSETILSPPPEKRGRKAASGKKGGKKSKATKPRTSKKSKAKDSDKEGTSNSTSEDG 120 130 140 150 160 170 190 200 210 220 230 240 bm0550 PGDGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGG :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|742 PGDGFTILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEEIGKALEKAGG 180 190 200 210 220 230 250 260 270 280 290 300 bm0550 KEFLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCL .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 EEFLETVKELRKSQGPLEVAEAAVSQSSGLAAKFVIHCHIPQWGSDKCEEQLEETIKNCL 240 250 260 270 280 290 310 320 330 340 350 360 bm0550 SAAEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSASSLKNVYFLLFDSES ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|742 SAAEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDDSSSSSLKNVYFLLFDSES 300 310 320 330 340 350 370 bm0550 IGIYVQEMAKLDAK ::::::::::::.: gi|742 IGIYVQEMAKLDTK 360 370 374 residues in 1 query sequences 3020366983 residues in 8842601 library sequences Tcomplib [34.26] (8 proc) start: Mon May 25 12:03:42 2009 done: Mon May 25 12:06:56 2009 Total Scan time: 1052.530 Total Display time: 0.090 Function used was FASTA [version 34.26.5 April 26, 2007]