hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090525/iprscan-20090525-12130939/chunk_1/iprscan-20090525-12130939.nocrc
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Query sequence: bm05515
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
PF01762.12.ls Galactosyltransferase                      332.7    5.8e-97   1
PF01762.12.fs Galactosyltransferase                      330.9    2.1e-96   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
PF01762.12.fs   1/1     208   402 ..     1   216 []   330.9  2.1e-96
PF01762.12.ls   1/1     208   402 ..     1   216 []   332.7  5.8e-97

Alignments of top-scoring domains:
PF01762.12.fs: domain 1 of 1, from 208 to 402: score 330.9, E = 2.1e-96
                   *->aRRnaiRkTWmnksnsrgvkdgrikslFlvGlsakgdgkvkklvmeE
                      ++R+aiR+TW+n+s ++g   ++i+++Fl+Gls+k +g+++++++eE
     bm05515   208    EARRAIRQTWGNESLAPG---IQITRIFLLGLSIKLNGYLQRAILEE 251  

                   arrtlyGDivvvdleDtYlnLtfKTltlllyvvskapsakligKiDdDVm
                   +r  +y+Di++++++DtY+nLt+KTl+++++v +++p++++++K+D D++
     bm05515   252 SR--QYHDIIQQEYLDTYYNLTIKTLMGMNWVATYCPHIPYVMKTDSDMF 299  

                   fnpdkLlslLdreniridpselsfyGylfkegepvrnkkskrqrehWYvp
                   +n+++L+++L+++  +++p++++f+Gyl+++++p+rnk+sk     WY+p
     bm05515   300 VNTEYLINKLLKP--DLPPRHNYFTGYLMRGYAPNRNKDSK-----WYMP 342  

                   psaYkcsrHHWPNgnkYppYvsGpfYlltrdAAplilkaskhrnfitvED
                   p+ Y+++r        Yp+++sG++Y++++d+A++i+k+s+ ++++++ED
     bm05515   343 PDLYPSER--------YPVFCSGTGYVFSGDLAEKIFKVSLGIRRLHLED 384  

                   vliTGilAndlgisrkdlp<-*
                   v++ Gi++ +l+i+++++p   
     bm05515   385 VYV-GICLAKLRIDPVPPP    402  

PF01762.12.ls: domain 1 of 1, from 208 to 402: score 332.7, E = 5.8e-97
                   *->aRRnaiRkTWmnksnsrgvkdgrikslFlvGlsakgdgkvkklvmeE
                      ++R+aiR+TW+n+s ++g   ++i+++Fl+Gls+k +g+++++++eE
     bm05515   208    EARRAIRQTWGNESLAPG---IQITRIFLLGLSIKLNGYLQRAILEE 251  

                   arrtlyGDivvvdleDtYlnLtfKTltlllyvvskapsakligKiDdDVm
                   +r  +y+Di++++++DtY+nLt+KTl+++++v +++p++++++K+D D++
     bm05515   252 SR--QYHDIIQQEYLDTYYNLTIKTLMGMNWVATYCPHIPYVMKTDSDMF 299  

                   fnpdkLlslLdreniridpselsfyGylfkegepvrnkkskrqrehWYvp
                   +n+++L+++L+++  +++p++++f+Gyl+++++p+rnk+sk     WY+p
     bm05515   300 VNTEYLINKLLKP--DLPPRHNYFTGYLMRGYAPNRNKDSK-----WYMP 342  

                   psaYkcsrHHWPNgnkYppYvsGpfYlltrdAAplilkaskhrnfitvED
                   p+ Y+++r        Yp+++sG++Y++++d+A++i+k+s+ ++++++ED
     bm05515   343 PDLYPSER--------YPVFCSGTGYVFSGDLAEKIFKVSLGIRRLHLED 384  

                   vliTGilAndlgisrkdlp<-*
                   v++ Gi++ +l+i+++++p   
     bm05515   385 VYV-GICLAKLRIDPVPPP    402  

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