# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm05530.fasta.nr -Q bm05530.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm05530, 396 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6819998 sequences Expectation_n fit: rho(ln(x))= 5.1550+/-0.000181; mu= 10.5567+/- 0.010 mean_var=67.4915+/-13.206, 0's: 44 Z-trim: 74 B-trim: 0 in 0/66 Lambda= 0.156117 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|45269029|gb|AAS55927.1| cytoskeletal beta actin ( 404) 2520 576.4 3.5e-162 gi|75061693|sp|Q5R6G0.1|ACTB_PONAB Actin, cytoplas ( 375) 2497 571.2 1.2e-160 gi|54696726|gb|AAV38735.1| actin, beta [synthetic ( 376) 2497 571.2 1.2e-160 gi|62897409|dbj|BAD96645.1| beta actin variant [Ho ( 375) 2496 570.9 1.4e-160 gi|63018|emb|CAA25004.1| beta-actin [Gallus gallus ( 375) 2494 570.5 1.9e-160 gi|66735458|gb|AAY53911.1| beta-actin [Phascolarct ( 375) 2494 570.5 1.9e-160 gi|82202181|sp|Q6NVA9|ACTB_XENTR Actin, cytoplasmi ( 375) 2493 570.2 2.2e-160 gi|74195718|dbj|BAE30426.1| unnamed protein produc ( 375) 2492 570.0 2.6e-160 gi|74151948|dbj|BAE32013.1| unnamed protein produc ( 375) 2492 570.0 2.6e-160 gi|148744172|gb|AAI42414.1| Actin, beta [Bos tauru ( 375) 2492 570.0 2.6e-160 gi|1351867|sp|P48975|ACTB_CRIGR Actin, cytoplasmic ( 375) 2492 570.0 2.6e-160 gi|47116231|sp|Q91ZK5|ACTB_SIGHI Actin, cytoplasmi ( 375) 2492 570.0 2.6e-160 gi|151176139|gb|ABR87937.1| beta-actin [Anas platy ( 375) 2492 570.0 2.6e-160 gi|16359158|gb|AAH16045.1| Actin, beta [Homo sapie ( 375) 2491 569.8 3e-160 gi|55732773|emb|CAH93084.1| hypothetical protein [ ( 375) 2491 569.8 3e-160 gi|82213656|sp|Q8JJB8|ACTG_TRISC Actin, cytoplasmi ( 375) 2491 569.8 3e-160 gi|74213524|dbj|BAE35572.1| unnamed protein produc ( 375) 2491 569.8 3e-160 gi|74190672|dbj|BAE28137.1| unnamed protein produc ( 375) 2491 569.8 3e-160 gi|74178273|dbj|BAE29918.1| unnamed protein produc ( 375) 2491 569.8 3e-160 gi|62897625|dbj|BAD96752.1| beta actin variant [Ho ( 375) 2491 569.8 3e-160 gi|74191564|dbj|BAE30357.1| unnamed protein produc ( 375) 2491 569.8 3e-160 gi|157881403|pdb|2BTF|A Chain A, The Structure Of ( 374) 2490 569.6 3.5e-160 gi|73958067|ref|XP_850617.1| PREDICTED: similar to ( 375) 2489 569.3 4.1e-160 gi|62897671|dbj|BAD96775.1| beta actin variant [Ho ( 375) 2488 569.1 4.8e-160 gi|109492380|ref|XP_001081785.1| PREDICTED: simila ( 536) 2489 569.4 5.5e-160 gi|231506|sp|P29751|ACTB_RABIT Actin, cytoplasmic ( 375) 2487 568.9 5.6e-160 gi|74191399|dbj|BAE30280.1| unnamed protein produc ( 375) 2487 568.9 5.6e-160 gi|41016788|sp|O93400.1|ACTB_XENLA Actin, cytoplas ( 375) 2487 568.9 5.6e-160 gi|309090|gb|AAA37170.1| A-X actin ( 375) 2487 568.9 5.6e-160 gi|28336|emb|CAA45026.1| mutant beta-actin (beta'- ( 375) 2486 568.7 6.6e-160 gi|126308524|ref|XP_001370029.1| PREDICTED: hypoth ( 375) 2485 568.4 7.7e-160 gi|82202372|sp|Q6P378|ACTG_XENTR Actin, cytoplasmi ( 375) 2485 568.4 7.7e-160 gi|82195535|sp|Q5JAK2|ACTG_RANLE Actin, cytoplasmi ( 375) 2484 568.2 9e-160 gi|21263373|sp|P79818|ACTB_ORYLA Actin, cytoplasmi ( 375) 2484 568.2 9e-160 gi|74191566|dbj|BAE30358.1| unnamed protein produc ( 375) 2483 568.0 1.1e-159 gi|57977261|dbj|BAD88412.1| beta cytoplasmic actin ( 375) 2483 568.0 1.1e-159 gi|7546744|gb|AAF63665.1| beta-actin [Platichthys ( 375) 2482 567.8 1.2e-159 gi|146386601|pdb|2OAN|A Chain A, Structure Of Oxid ( 375) 2482 567.8 1.2e-159 gi|42560193|sp|P83750|ACTB_CYPCA Actin, cytoplasmi ( 375) 2482 567.8 1.2e-159 gi|63004272|gb|AAY25518.1| beta-actin [Cirrhinus m ( 375) 2481 567.5 1.4e-159 gi|113271|sp|P15475|ACTB_XENBO Actin, cytoplasmic ( 376) 2481 567.5 1.4e-159 gi|116242946|sp|Q0PGG4|ACTB_BOSMU Actin, cytoplasm ( 375) 2480 567.3 1.7e-159 gi|157878210|pdb|1HLU|A Chain A, Structure Of Bovi ( 374) 2479 567.1 2e-159 gi|33415846|gb|AAQ18432.1| cytoplasmic actin type ( 375) 2479 567.1 2e-159 gi|1703111|sp|P53485|ACTB2_FUGRU Actin, cytoplasmi ( 375) 2479 567.1 2e-159 gi|54036665|sp|P63259|ACTG_RAT Actin, cytoplasmic ( 375) 2478 566.9 2.3e-159 gi|60653037|gb|AAX29213.1| actin gamma 1 [syntheti ( 376) 2478 566.9 2.3e-159 gi|33318285|gb|AAQ05016.1|AF466279_1 beta-actin [T ( 375) 2477 566.6 2.7e-159 gi|18034011|gb|AAL57317.1|AF393832_1 beta-actin [M ( 375) 2477 566.6 2.7e-159 gi|1703123|sp|P53505|ACT5_XENLA Actin, cytoplasmic ( 376) 2477 566.6 2.7e-159 >>gi|45269029|gb|AAS55927.1| cytoskeletal beta actin [Su (404 aa) initn: 2511 init1: 2511 opt: 2520 Z-score: 3066.9 bits: 576.4 E(): 3.5e-162 Smith-Waterman score: 2520; 96.717% identity (97.475% similar) in 396 aa overlap (1-396:12-404) 10 20 30 40 bm0553 PRAQSLAFADPPPVHTRRQLTMDDDIAALVVDNGSGMCKAGFAGDDAPR :: ::: .: : :..:::::::::::::::::::::::::::: gi|452 AETASTPPAQAPRPCRSAFA--AGLH-RYQFAMDDDIAALVVDNGSGMCKAGFAGDDAPR 10 20 30 40 50 50 60 70 80 90 100 bm0553 AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|452 AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHH 60 70 80 90 100 110 110 120 130 140 150 160 bm0553 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|452 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 120 130 140 150 160 170 170 180 190 200 210 220 bm0553 TGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|452 TGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 180 190 200 210 220 230 230 240 250 260 270 280 bm0553 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|452 VRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG 240 250 260 270 280 290 290 300 310 320 330 340 bm0553 MESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|452 MESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 300 310 320 330 340 350 350 360 370 380 390 bm0553 IIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF ::::::::::::::::::::::::::::::::::::::::::::::: gi|452 IIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360 370 380 390 400 >>gi|75061693|sp|Q5R6G0.1|ACTB_PONAB Actin, cytoplasmic (375 aa) initn: 2497 init1: 2497 opt: 2497 Z-score: 3039.4 bits: 571.2 E(): 1.2e-160 Smith-Waterman score: 2497; 100.000% identity (100.000% similar) in 375 aa overlap (22-396:1-375) 10 20 30 40 50 60 bm0553 PRAQSLAFADPPPVHTRRQLTMDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR ::::::::::::::::::::::::::::::::::::::: gi|750 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 10 20 30 70 80 90 100 110 120 bm0553 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 40 50 60 70 80 90 130 140 150 160 170 180 bm0553 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGV 100 110 120 130 140 150 190 200 210 220 230 240 bm0553 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 160 170 180 190 200 210 250 260 270 280 290 300 bm0553 ALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 ALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTF 220 230 240 250 260 270 310 320 330 340 350 360 bm0553 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV 280 290 300 310 320 330 370 380 390 bm0553 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF :::::::::::::::::::::::::::::::::::: gi|750 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 340 350 360 370 >>gi|54696726|gb|AAV38735.1| actin, beta [synthetic cons (376 aa) initn: 2497 init1: 2497 opt: 2497 Z-score: 3039.4 bits: 571.2 E(): 1.2e-160 Smith-Waterman score: 2497; 100.000% identity (100.000% similar) in 375 aa overlap (22-396:1-375) 10 20 30 40 50 60 bm0553 PRAQSLAFADPPPVHTRRQLTMDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR ::::::::::::::::::::::::::::::::::::::: gi|546 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 10 20 30 70 80 90 100 110 120 bm0553 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 40 50 60 70 80 90 130 140 150 160 170 180 bm0553 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGV 100 110 120 130 140 150 190 200 210 220 230 240 bm0553 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 160 170 180 190 200 210 250 260 270 280 290 300 bm0553 ALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 ALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTF 220 230 240 250 260 270 310 320 330 340 350 360 bm0553 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV 280 290 300 310 320 330 370 380 390 bm0553 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF :::::::::::::::::::::::::::::::::::: gi|546 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCFL 340 350 360 370 >>gi|62897409|dbj|BAD96645.1| beta actin variant [Homo s (375 aa) initn: 2496 init1: 2496 opt: 2496 Z-score: 3038.2 bits: 570.9 E(): 1.4e-160 Smith-Waterman score: 2496; 99.733% identity (100.000% similar) in 375 aa overlap (22-396:1-375) 10 20 30 40 50 60 bm0553 PRAQSLAFADPPPVHTRRQLTMDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR ::::::::::::::::::::::::::::::::::::::: gi|628 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 10 20 30 70 80 90 100 110 120 bm0553 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 40 50 60 70 80 90 130 140 150 160 170 180 bm0553 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGV 100 110 120 130 140 150 190 200 210 220 230 240 bm0553 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 160 170 180 190 200 210 250 260 270 280 290 300 bm0553 ALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 ALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTF 220 230 240 250 260 270 310 320 330 340 350 360 bm0553 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV 280 290 300 310 320 330 370 380 390 bm0553 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF :::::.:::::::::::::::::::::::::::::: gi|628 WIGGSVLASLSTFQQMWISKQEYDESGPSIVHRKCF 340 350 360 370 >>gi|63018|emb|CAA25004.1| beta-actin [Gallus gallus] (375 aa) initn: 2494 init1: 2494 opt: 2494 Z-score: 3035.8 bits: 570.5 E(): 1.9e-160 Smith-Waterman score: 2494; 99.733% identity (100.000% similar) in 375 aa overlap (22-396:1-375) 10 20 30 40 50 60 bm0553 PRAQSLAFADPPPVHTRRQLTMDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR ::::::::::::::::::::::::::::::::::::::: gi|630 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 10 20 30 70 80 90 100 110 120 bm0553 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|630 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 40 50 60 70 80 90 130 140 150 160 170 180 bm0553 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|630 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGV 100 110 120 130 140 150 190 200 210 220 230 240 bm0553 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|630 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 160 170 180 190 200 210 250 260 270 280 290 300 bm0553 ALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|630 ALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTF 220 230 240 250 260 270 310 320 330 340 350 360 bm0553 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|630 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERRYSV 280 290 300 310 320 330 370 380 390 bm0553 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF :::::::::::::::::::::::::::::::::::: gi|630 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 340 350 360 370 >>gi|66735458|gb|AAY53911.1| beta-actin [Phascolarctos c (375 aa) initn: 2494 init1: 2494 opt: 2494 Z-score: 3035.8 bits: 570.5 E(): 1.9e-160 Smith-Waterman score: 2494; 99.733% identity (100.000% similar) in 375 aa overlap (22-396:1-375) 10 20 30 40 50 60 bm0553 PRAQSLAFADPPPVHTRRQLTMDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR ::::::::::::::::::::::::::::::::::::::: gi|667 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 10 20 30 70 80 90 100 110 120 bm0553 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|667 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 40 50 60 70 80 90 130 140 150 160 170 180 bm0553 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|667 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGV 100 110 120 130 140 150 190 200 210 220 230 240 bm0553 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|667 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKERLCYV 160 170 180 190 200 210 250 260 270 280 290 300 bm0553 ALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|667 ALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTF 220 230 240 250 260 270 310 320 330 340 350 360 bm0553 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|667 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV 280 290 300 310 320 330 370 380 390 bm0553 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF :::::::::::::::::::::::::::::::::::: gi|667 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 340 350 360 370 >>gi|82202181|sp|Q6NVA9|ACTB_XENTR Actin, cytoplasmic 1 (375 aa) initn: 2493 init1: 2493 opt: 2493 Z-score: 3034.5 bits: 570.2 E(): 2.2e-160 Smith-Waterman score: 2493; 99.733% identity (100.000% similar) in 375 aa overlap (22-396:1-375) 10 20 30 40 50 60 bm0553 PRAQSLAFADPPPVHTRRQLTMDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR ::::::::::::::::::::::::::::::::::::::: gi|822 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 10 20 30 70 80 90 100 110 120 bm0553 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|822 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 40 50 60 70 80 90 130 140 150 160 170 180 bm0553 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|822 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGV 100 110 120 130 140 150 190 200 210 220 230 240 bm0553 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|822 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 160 170 180 190 200 210 250 260 270 280 290 300 bm0553 ALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|822 ALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTY 220 230 240 250 260 270 310 320 330 340 350 360 bm0553 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|822 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV 280 290 300 310 320 330 370 380 390 bm0553 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF :::::::::::::::::::::::::::::::::::: gi|822 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 340 350 360 370 >>gi|74195718|dbj|BAE30426.1| unnamed protein product [M (375 aa) initn: 2492 init1: 2492 opt: 2492 Z-score: 3033.3 bits: 570.0 E(): 2.6e-160 Smith-Waterman score: 2492; 99.733% identity (100.000% similar) in 375 aa overlap (22-396:1-375) 10 20 30 40 50 60 bm0553 PRAQSLAFADPPPVHTRRQLTMDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR ::::::::::::::::::::::::::::::::::::::: gi|741 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 10 20 30 70 80 90 100 110 120 bm0553 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 40 50 60 70 80 90 130 140 150 160 170 180 bm0553 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGV 100 110 120 130 140 150 190 200 210 220 230 240 bm0553 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|741 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAKREIVRDIKEKLCYV 160 170 180 190 200 210 250 260 270 280 290 300 bm0553 ALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 ALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTF 220 230 240 250 260 270 310 320 330 340 350 360 bm0553 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV 280 290 300 310 320 330 370 380 390 bm0553 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF :::::::::::::::::::::::::::::::::::: gi|741 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 340 350 360 370 >>gi|74151948|dbj|BAE32013.1| unnamed protein product [M (375 aa) initn: 2492 init1: 2492 opt: 2492 Z-score: 3033.3 bits: 570.0 E(): 2.6e-160 Smith-Waterman score: 2492; 99.733% identity (100.000% similar) in 375 aa overlap (22-396:1-375) 10 20 30 40 50 60 bm0553 PRAQSLAFADPPPVHTRRQLTMDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR ::::::::::::::::::::::::::::::::::::::: gi|741 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 10 20 30 70 80 90 100 110 120 bm0553 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 40 50 60 70 80 90 130 140 150 160 170 180 bm0553 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGV 100 110 120 130 140 150 190 200 210 220 230 240 bm0553 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|741 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIARDIKEKLCYV 160 170 180 190 200 210 250 260 270 280 290 300 bm0553 ALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 ALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTF 220 230 240 250 260 270 310 320 330 340 350 360 bm0553 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV 280 290 300 310 320 330 370 380 390 bm0553 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF :::::::::::::::::::::::::::::::::::: gi|741 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 340 350 360 370 >>gi|148744172|gb|AAI42414.1| Actin, beta [Bos taurus] (375 aa) initn: 2492 init1: 2492 opt: 2492 Z-score: 3033.3 bits: 570.0 E(): 2.6e-160 Smith-Waterman score: 2492; 99.733% identity (100.000% similar) in 375 aa overlap (22-396:1-375) 10 20 30 40 50 60 bm0553 PRAQSLAFADPPPVHTRRQLTMDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR ::::::::::::::::::::::::::::::::::::::: gi|148 MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 10 20 30 70 80 90 100 110 120 bm0553 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 40 50 60 70 80 90 130 140 150 160 170 180 bm0553 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGV ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|148 EHPVLLTEAPLNPKANREKMTQIMFEAFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGV 100 110 120 130 140 150 190 200 210 220 230 240 bm0553 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 160 170 180 190 200 210 250 260 270 280 290 300 bm0553 ALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTF 220 230 240 250 260 270 310 320 330 340 350 360 bm0553 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV 280 290 300 310 320 330 370 380 390 bm0553 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF :::::::::::::::::::::::::::::::::::: gi|148 WIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 340 350 360 370 396 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Fri Aug 8 00:06:33 2008 done: Fri Aug 8 00:09:00 2008 Total Scan time: 809.560 Total Display time: 0.090 Function used was FASTA [version 34.26.5 April 26, 2007]