hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-00211456/chunk_1/iprscan-20080808-00211456.nocrc
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Query sequence: bm05540
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
PF00393.9.fs  6-phosphogluconate dehydrogenase, C-ter   757.3   2.9e-258   1
PF00393.9.ls  6-phosphogluconate dehydrogenase, C-ter   759.4   2.1e-225   1
PF03446.5.fs  NAD binding domain of 6-phosphogluconat   303.9    1.7e-91   1
PF03446.5.ls  NAD binding domain of 6-phosphogluconat   305.9    6.9e-89   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
PF03446.5.fs    1/1      16   189 ..     1   180 []   303.9  1.7e-91
PF03446.5.ls    1/1      16   189 ..     1   180 []   305.9  6.9e-89
PF00393.9.fs    1/1     193   483 ..     1   297 []   757.3 2.9e-258
PF00393.9.ls    1/1     193   483 ..     1   297 []   759.4 2.1e-225

Alignments of top-scoring domains:
PF03446.5.fs: domain 1 of 1, from 16 to 189: score 303.9, E = 1.7e-91
                   *->makIGfIGLGvMGspMAlNLlkaGytVtVynRtpekveelvaeGakg
                      +a+I++IGL+vMG+++ lN+ ++G+ V+++nRt +kv++++a++akg
     bm05540    16    QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKG 62   

                   knataaaspaeaaasaekPdvvitMVpagaaVdaVifgedGllpglepGd
                   +++++a s++e++++++kP+++i++V+ag+aVd++i+    l+p+l+ Gd
     bm05540    63 TKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVDDFIEK---LVPLLDTGD 109  

                   iiIDgsTispedtrrrakelaekGirflDAPVSGGeeGAenGtLsiMvGG
                   iiIDg+++ + dt rr+++l++kGi+f++ +VSGGeeGA++G+ s+M+GG
     bm05540   110 IIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGEEGARYGP-SLMPGG 158  

                   deeafervkPiLeamgaKv.dGePcvtaahyiGp<-*
                   ++ea++++k i++ ++aKv++GePc+    ++G+   
     bm05540   159 NKEAWPHIKTIFQGIAAKVgTGEPCCD---WVGD    189  

PF03446.5.ls: domain 1 of 1, from 16 to 189: score 305.9, E = 6.9e-89
                   *->makIGfIGLGvMGspMAlNLlkaGytVtVynRtpekveelvaeGakg
                      +a+I++IGL+vMG+++ lN+ ++G+ V+++nRt +kv++++a++akg
     bm05540    16    QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKG 62   

                   knataaaspaeaaasaekPdvvitMVpagaaVdaVifgedGllpglepGd
                   +++++a s++e++++++kP+++i++V+ag+aVd++i+    l+p+l+ Gd
     bm05540    63 TKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVDDFIEK---LVPLLDTGD 109  

                   iiIDgsTispedtrrrakelaekGirflDAPVSGGeeGAenGtLsiMvGG
                   iiIDg+++ + dt rr+++l++kGi+f++ +VSGGeeGA++G+ s+M+GG
     bm05540   110 IIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGEEGARYGP-SLMPGG 158  

                   deeafervkPiLeamgaKv.dGePcvtaahyiGp<-*
                   ++ea++++k i++ ++aKv++GePc+    ++G+   
     bm05540   159 NKEAWPHIKTIFQGIAAKVgTGEPCCD---WVGD    189  

PF00393.9.fs: domain 1 of 1, from 193 to 483: score 757.3, E = 2.9e-258
                   *->GHyVKMVHNGIEYGDMQLIaEAYdlLKdvLGLsndEiadVFaeWNkG
                      GH+VKMVHNGIEYGDMQLI+EAY+l+KdvLG+  dE+a+ F++WNk 
     bm05540   193    GHFVKMVHNGIEYGDMQLICEAYHLMKDVLGMAQDEMAQAFEDWNKT 239  

                   eLdSYLIEITadILrkkDpedGkpLVDkILDkAGQKGTGkWTvqsALdlG
                   eLdS+LIEITa+IL+++D +dGk+L+ kI+D AGQKGTGkWT++sAL++G
     bm05540   240 ELDSFLIEITANILKFQD-TDGKHLLPKIRDSAGQKGTGKWTAISALEYG 288  

                   vPvtlItEAVfARyLSslKeeRvaAskvLsgPkvppaeakfegdkkefIe
                   vPvtlI+EAVfAR+LSslK+eR++Ask+L+gP+    +++f gdkk f+e
     bm05540   289 VPVTLIGEAVFARCLSSLKDERIQASKKLKGPQ----KFQFDGDKKSFLE 334  

                   dvrqALYaSKIvSYAQGFmllraASkeygWnLnlgeIArIWRGGCIIRaq
                   d+r+ALYaSKI+SYAQGFmllr+A+ e+gW Ln+g+IA++WRGGCIIR++
     bm05540   335 DIRKALYASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIRSV 384  

                   FLdkIkdAYeknpdLaNLLldpyFkkeikeaqdswRrVValAveaGiPvP
                   FL+kIkdA+++np+L+NLLld++Fk++++++qdswRr+V++ v+aGiP+P
     bm05540   385 FLGKIKDAFDRNPELQNLLLDDFFKSAVENCQDSWRRAVSTGVQAGIPMP 434  

                   afSsALsYyDsYRserLPANLiQAQRDYFGAHTYeRlDkeGgeFFHTnWt
                   +f++ALs+yD+YR+e+LPA LiQAQRDYFGAHTYe+l k+G  F+HTnWt
     bm05540   435 CFTTALSFYDGYRHEMLPASLIQAQRDYFGAHTYELLAKPGQ-FIHTNWT 483  

                   <-*
                      
     bm05540     -     -    

PF00393.9.ls: domain 1 of 1, from 193 to 483: score 759.4, E = 2.1e-225
                   *->GHyVKMVHNGIEYGDMQLIaEAYdlLKdvLGLsndEiadVFaeWNkG
                      GH+VKMVHNGIEYGDMQLI+EAY+l+KdvLG+  dE+a+ F++WNk 
     bm05540   193    GHFVKMVHNGIEYGDMQLICEAYHLMKDVLGMAQDEMAQAFEDWNKT 239  

                   eLdSYLIEITadILrkkDpedGkpLVDkILDkAGQKGTGkWTvqsALdlG
                   eLdS+LIEITa+IL+++D +dGk+L+ kI+D AGQKGTGkWT++sAL++G
     bm05540   240 ELDSFLIEITANILKFQD-TDGKHLLPKIRDSAGQKGTGKWTAISALEYG 288  

                   vPvtlItEAVfARyLSslKeeRvaAskvLsgPkvppaeakfegdkkefIe
                   vPvtlI+EAVfAR+LSslK+eR++Ask+L+gP+    +++f gdkk f+e
     bm05540   289 VPVTLIGEAVFARCLSSLKDERIQASKKLKGPQ----KFQFDGDKKSFLE 334  

                   dvrqALYaSKIvSYAQGFmllraASkeygWnLnlgeIArIWRGGCIIRaq
                   d+r+ALYaSKI+SYAQGFmllr+A+ e+gW Ln+g+IA++WRGGCIIR++
     bm05540   335 DIRKALYASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIRSV 384  

                   FLdkIkdAYeknpdLaNLLldpyFkkeikeaqdswRrVValAveaGiPvP
                   FL+kIkdA+++np+L+NLLld++Fk++++++qdswRr+V++ v+aGiP+P
     bm05540   385 FLGKIKDAFDRNPELQNLLLDDFFKSAVENCQDSWRRAVSTGVQAGIPMP 434  

                   afSsALsYyDsYRserLPANLiQAQRDYFGAHTYeRlDkeGgeFFHTnWt
                   +f++ALs+yD+YR+e+LPA LiQAQRDYFGAHTYe+l k+G  F+HTnWt
     bm05540   435 CFTTALSFYDGYRHEMLPASLIQAQRDYFGAHTYELLAKPGQ-FIHTNWT 483  

                   <-*
                      
     bm05540     -     -    

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