hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-00271150/chunk_1/iprscan-20080808-00271150.nocrc
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Query sequence: bm05545
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00220                                                 338.5    4.5e-97   1
SM00219                                                  -6.6    9.9e-11   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00219    1/1     120   380 ..     1   280 []    -6.6  9.9e-11
SM00220    1/1     120   380 ..     1   231 []   338.5  4.5e-97

Alignments of top-scoring domains:
SM00219: domain 1 of 1, from 120 to 380: score -6.6, E = 9.9e-11
                   *->ltlgkkLGeGaFGeVykGtlk...ieVAVKtLkeda......keeFl
                       ++gk+LGeG F +V++++   +++e A+K L + +  +++++    
     bm05545   120    FKFGKILGEGSFSTVVLARELatsREYAIKILEKRHiikenkVPYVT 166  

                   rEakiMkklGgkHpNiVkLlGvcteegrrFmevePlmivmEymegGdLld
                   rE  +M++l  +Hp  VkL+    ++       e l+  + y+++G Ll+
     bm05545   167 RERDVMSRL--DHPFFVKLYFTFQDD-------EKLYFGLSYAKNGELLK 207  

                   yLrknrpklslsdLlsfAlQIAkGMeYLesknfvHRDLAARNcLvgenkv
                   y+rk +  +       +   I +  eYL+ k+++HRDL   N+L++e+ +
     bm05545   208 YIRKIGS-FDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH 256  

                   vKIsDFGLsRdlyddDkkGeskdyYrkkggkggktllPirWmAPEslkdg
                   + I+DFG ++ l  +      ++  r+    ++ ++      +PE l ++
     bm05545   257 IQITDFGTAKVLSPE------SKQARA----NS-FVGTAQYVSPELLTEK 295  

                   kFtskSDVWSFGVlLWEiftlGeqPYpgeiqqfmsneevleylkkGyRlp
                        SD W+ G  ++ +    + P+         ne ++ +       +
     bm05545   296 SACKSSDLWALGCIIYQLV--AGLPPFR-----AGNEYLIFQKIIKLEYD 338  

                   kPendlpiSsvtCPdelYdlMlqCWaedPedRPtFsel........verl
                    Pe           ++  dl ++    d+ +R   +e ++ ++ + + ++
     bm05545   339 FPEK--------FFPKARDLVEKLLVLDATKRLGCEEMegygplkaHPFF 380  

                   <-*
                      
     bm05545     -     -    

SM00220: domain 1 of 1, from 120 to 380: score 338.5, E = 4.5e-97
                   *->YellkklGkGaFGkVylardkktgrlvAiKvik..........eril
                      ++++k+lG+G+F++V lar+  t r++AiK++ +++  ++++   + 
     bm05545   120    FKFGKILGEGSFSTVVLARELATSREYAIKILEkrhiikenkvPYVT 166  

                   rEikiLkk.dHPNIVkLydvfed.dklylVmEyceGdlGdLfdllkkrgr
                   rE++++++ dHP+ VkLy +f+d++kly+ + y+ +  G+L+++++k g+
     bm05545   167 RERDVMSRlDHPFFVKLYFTFQDdEKLYFGLSYAKN--GELLKYIRKIGS 214  

                   rglrkvlsE.earfyfrQilsaLeYLHsqgIiHRDLKPeNiLLds..hvK
                         ++E+ +rfy+++i+saLeYLH +gIiHRDLKPeNiLL+++ h+ 
     bm05545   215 ------FDEtCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEdmHIQ 258  

                   laDFGlArql.........ttfvGTpeYmAPEvl...gYgkpavDiWSlG
                   ++DFG A++l++++++ + ++fvGT  Y++PE+l++++  k ++D W+lG
     bm05545   259 ITDFGTAKVLspeskqaraNSFVGTAQYVSPELLtekSACK-SSDLWALG 307  

                   cilyElltGkpPFp..qldlifkkig..........SpeakdLikklLvk
                   ci+y l++G pPF+ ++++lif+ki + +++ +++  p a+dL++klLv 
     bm05545   308 CIIYQLVAGLPPFRagNEYLIFQKIIkleydfpekfFPKARDLVEKLLVL 357  

                   dPekRlta.eaLedeldikaHPff<-*
                   d +kRl+++e        kaHPff   
     bm05545   358 DATKRLGCeEMEG-YGPLKAHPFF    380  

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