# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm05593.fasta.nr -Q bm05593.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm05593, 289 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6822590 sequences Expectation_n fit: rho(ln(x))= 5.7874+/-0.000193; mu= 6.0268+/- 0.011 mean_var=97.2849+/-18.645, 0's: 45 Z-trim: 58 B-trim: 0 in 0/67 Lambda= 0.130032 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|2501084|sp|Q16623|STX1A_HUMAN Syntaxin-1A (Neur ( 288) 1803 348.1 9e-94 gi|220777|dbj|BAA01231.1| HPC-1 antigen [Rattus no ( 298) 1796 346.8 2.3e-93 gi|75054702|sp|Q5R4L2.1|STX1A_PONAB Syntaxin-1A ( 288) 1794 346.4 2.9e-93 gi|417842|sp|P32851|STX1A_RAT Syntaxin-1A (Synapto ( 288) 1791 345.9 4.3e-93 gi|7595847|gb|AAF64478.1| syntaxin 1A [Macaca mula ( 288) 1785 344.8 9.4e-93 gi|20141656|sp|O35526|STX1A_MOUSE Syntaxin-1A (Neu ( 288) 1784 344.6 1.1e-92 gi|28502901|gb|AAH47133.1| Stx1a protein [Mus musc ( 287) 1777 343.3 2.6e-92 gi|417841|sp|P32850|STX1A_BOVIN Syntaxin-1A (Synap ( 288) 1777 343.3 2.6e-92 gi|6665797|gb|AAF23017.1|AF217191_1 syntaxin 1A [R ( 288) 1776 343.1 3e-92 gi|207127|gb|AAA42195.1| syntaxin A gi|220902| ( 285) 1770 341.9 6.5e-92 gi|119590057|gb|EAW69651.1| syntaxin 1A (brain), i ( 283) 1740 336.3 3.2e-90 gi|110645670|gb|AAI18730.1| Hypothetical protein M ( 288) 1715 331.6 8.4e-89 gi|73957754|ref|XP_849756.1| PREDICTED: similar to ( 293) 1710 330.7 1.6e-88 gi|149756067|ref|XP_001493706.1| PREDICTED: simila ( 293) 1701 329.0 5.3e-88 gi|118099987|ref|XP_001233551.1| PREDICTED: simila ( 316) 1689 326.8 2.6e-87 gi|114613943|ref|XP_001146754.1| PREDICTED: hypoth ( 288) 1687 326.4 3.2e-87 gi|126314530|ref|XP_001379278.1| PREDICTED: simila ( 289) 1683 325.6 5.4e-87 gi|114613939|ref|XP_001147091.1| PREDICTED: hypoth ( 289) 1683 325.6 5.4e-87 gi|170785226|pdb|3C98|B Chain B, Revised Structure ( 279) 1670 323.2 2.9e-86 gi|114613937|ref|XP_001146812.1| PREDICTED: hypoth ( 288) 1668 322.8 3.8e-86 gi|114613941|ref|XP_001146878.1| PREDICTED: hypoth ( 288) 1666 322.4 4.9e-86 gi|114613935|ref|XP_001146957.1| PREDICTED: hypoth ( 287) 1650 319.4 3.9e-85 gi|119590055|gb|EAW69649.1| syntaxin 1A (brain), i ( 259) 1613 312.5 4.5e-83 gi|7447071|pir||G01485 syntaxin - human gi|531 ( 259) 1592 308.5 6.9e-82 gi|134025555|gb|AAI35809.1| LOC100124935 protein [ ( 288) 1552 301.0 1.3e-79 gi|94732621|emb|CAK11233.1| syntaxin1b [Danio reri ( 288) 1545 299.7 3.3e-79 gi|47117768|sp|P61267|STX1B_BOVIN Syntaxin-1B (Syn ( 288) 1544 299.5 3.8e-79 gi|47117767|sp|P61264.1|STX1B_MOUSE Syntaxin-1B ( 288) 1543 299.4 4.3e-79 gi|7107406|gb|AAF36403.1|AF229154_1 syntaxin 1B [D ( 288) 1538 298.4 8.3e-79 gi|383088|prf||1902210A synaptocanalin:ISOTYPE=I ( 288) 1537 298.2 9.5e-79 gi|47028629|gb|AAP83589.2| syntaxin 1B [Oncorhynch ( 288) 1517 294.5 1.3e-77 gi|109128328|ref|XP_001103901.1| PREDICTED: simila ( 336) 1483 288.2 1.2e-75 gi|126334693|ref|XP_001372030.1| PREDICTED: simila ( 383) 1483 288.2 1.3e-75 gi|531250|dbj|BAA07152.1| SYNTAXIN1B [Homo sapiens ( 288) 1434 278.9 6.2e-73 gi|3123708|dbj|BAA25986.1| syntaxin1B [Mus musculu ( 288) 1423 276.8 2.6e-72 gi|119590061|gb|EAW69655.1| syntaxin 1A (brain), i ( 248) 1413 274.9 8.5e-72 gi|12804305|gb|AAH03011.1| STX1A protein [Homo sap ( 251) 1413 274.9 8.6e-72 gi|15079185|gb|AAB65500.2|AAB65500 syntaxin 1C [Ho ( 260) 1413 274.9 8.8e-72 gi|32306449|dbj|BAC78519.1| syntaxin 1C [Homo sapi ( 260) 1413 274.9 8.8e-72 gi|66393091|gb|AAY45889.1| syntaxin 1B alternative ( 277) 1413 275.0 9.3e-72 gi|148687448|gb|EDL19395.1| syntaxin 1A (brain), i ( 263) 1406 273.6 2.2e-71 gi|29378327|gb|AAO83845.1|AF484088_1 syntaxin 1A [ ( 290) 1355 264.1 1.8e-68 gi|73958357|ref|XP_547038.2| PREDICTED: similar to ( 348) 1356 264.3 1.8e-68 gi|193915389|gb|EDW14256.1| GI23434 [Drosophila mo ( 291) 1346 262.4 5.8e-68 gi|2501096|sp|Q16932|STX_APLCA Syntaxin gi|425 ( 290) 1344 262.0 7.6e-68 gi|52221424|gb|AAU29614.1| t-SNARE syntaxin 1B [La ( 249) 1340 261.2 1.1e-67 gi|13310402|gb|AAK18276.1|AF333035_1 syntaxin [Str ( 288) 1319 257.3 1.9e-66 gi|2501095|sp|Q24547|STX1A_DROME Syntaxin-1A (dSyn ( 291) 1314 256.4 3.7e-66 gi|194102395|gb|EDW24438.1| GL24148 [Drosophila pe ( 291) 1311 255.8 5.5e-66 gi|998779|gb|AAB34841.1| syntaxin 1, Dsynt1 [Droso ( 291) 1309 255.5 7.2e-66 >>gi|2501084|sp|Q16623|STX1A_HUMAN Syntaxin-1A (Neuron-s (288 aa) initn: 1803 init1: 1803 opt: 1803 Z-score: 1838.6 bits: 348.1 E(): 9e-94 Smith-Waterman score: 1803; 100.000% identity (100.000% similar) in 288 aa overlap (2-289:1-288) 10 20 30 40 50 60 bm0559 SMKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 MKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHS 10 20 30 40 50 70 80 90 100 110 120 bm0559 AILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 AILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQ 60 70 80 90 100 110 130 140 150 160 170 180 bm0559 HSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 HSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFAS 120 130 140 150 160 170 190 200 210 220 230 240 bm0559 GIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 GIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEH 180 190 200 210 220 230 250 260 270 280 bm0559 AVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA ::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 AVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA 240 250 260 270 280 >>gi|220777|dbj|BAA01231.1| HPC-1 antigen [Rattus norveg (298 aa) initn: 1796 init1: 1796 opt: 1796 Z-score: 1831.4 bits: 346.8 E(): 2.3e-93 Smith-Waterman score: 1796; 98.958% identity (100.000% similar) in 288 aa overlap (1-288:10-297) 10 20 30 40 50 bm0559 SMKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAEN :::::::::::::::::::::.::::::::::::::::::::::::::::: gi|220 QPAPTATPASMKDRTQELRTAKDSDDDDDVTVTVDRDRFMDEFFEQVEEIRGFIDKIAEN 10 20 30 40 50 60 60 70 80 90 100 110 bm0559 VEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 VEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSS 70 80 90 100 110 120 120 130 140 150 160 170 bm0559 ADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 ADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLE 130 140 150 160 170 180 180 190 200 210 220 230 bm0559 SGNPAIFASGIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|220 SGNPAIFASGIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMI 190 200 210 220 230 240 240 250 260 270 280 bm0559 DRIEYNVEHAVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA :::::::::::::::::::::::::::::::::::::::::::::::.::::.:::: gi|220 DRIEYNVEHAVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIIIASTIGGIFG 250 260 270 280 290 >>gi|75054702|sp|Q5R4L2.1|STX1A_PONAB Syntaxin-1A gi (288 aa) initn: 1794 init1: 1794 opt: 1794 Z-score: 1829.5 bits: 346.4 E(): 2.9e-93 Smith-Waterman score: 1794; 99.653% identity (99.653% similar) in 288 aa overlap (2-289:1-288) 10 20 30 40 50 60 bm0559 SMKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 MKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHS 10 20 30 40 50 70 80 90 100 110 120 bm0559 AILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 AILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQ 60 70 80 90 100 110 130 140 150 160 170 180 bm0559 HSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 HSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFAS 120 130 140 150 160 170 190 200 210 220 230 240 bm0559 GIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 GIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEH 180 190 200 210 220 230 250 260 270 280 bm0559 AVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA ::::::::::::::::::::::::::::::::::: ::::::::::::: gi|750 AVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVIPGIVIASTVGGIFA 240 250 260 270 280 >>gi|417842|sp|P32851|STX1A_RAT Syntaxin-1A (Synaptotagm (288 aa) initn: 1791 init1: 1791 opt: 1791 Z-score: 1826.5 bits: 345.9 E(): 4.3e-93 Smith-Waterman score: 1791; 98.955% identity (100.000% similar) in 287 aa overlap (2-288:1-287) 10 20 30 40 50 60 bm0559 SMKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHS ::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|417 MKDRTQELRTAKDSDDDDDVTVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHS 10 20 30 40 50 70 80 90 100 110 120 bm0559 AILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|417 AILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQ 60 70 80 90 100 110 130 140 150 160 170 180 bm0559 HSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|417 HSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFAS 120 130 140 150 160 170 190 200 210 220 230 240 bm0559 GIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|417 GIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEH 180 190 200 210 220 230 250 260 270 280 bm0559 AVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA ::::::::::::::::::::::::::::::::::::::.::::.:::: gi|417 AVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIIIASTIGGIFG 240 250 260 270 280 >>gi|7595847|gb|AAF64478.1| syntaxin 1A [Macaca mulatta] (288 aa) initn: 1785 init1: 1785 opt: 1785 Z-score: 1820.4 bits: 344.8 E(): 9.4e-93 Smith-Waterman score: 1785; 98.958% identity (99.306% similar) in 288 aa overlap (2-289:1-288) 10 20 30 40 50 60 bm0559 SMKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHS ::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|759 MKDRTQELRTAKDSDDDDDVTVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHS 10 20 30 40 50 70 80 90 100 110 120 bm0559 AILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQ ::::::::::::::::::::::::::::::::::::::: :::: ::::::::::::::: gi|759 AILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQPIEQEAGLNRSSADLRIRKTQ 60 70 80 90 100 110 130 140 150 160 170 180 bm0559 HSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|759 HSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFAS 120 130 140 150 160 170 190 200 210 220 230 240 bm0559 GIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|759 GIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEH 180 190 200 210 220 230 250 260 270 280 bm0559 AVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA ::::::::::::::::::::::::::::::::::::::::::::::::: gi|759 AVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA 240 250 260 270 280 >>gi|20141656|sp|O35526|STX1A_MOUSE Syntaxin-1A (Neuron- (288 aa) initn: 1784 init1: 1784 opt: 1784 Z-score: 1819.4 bits: 344.6 E(): 1.1e-92 Smith-Waterman score: 1784; 98.606% identity (100.000% similar) in 287 aa overlap (2-288:1-287) 10 20 30 40 50 60 bm0559 SMKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHS ::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|201 MKDRTQELRTAKDSDDDDDVTVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHS 10 20 30 40 50 70 80 90 100 110 120 bm0559 AILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|201 AILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQ 60 70 80 90 100 110 130 140 150 160 170 180 bm0559 HSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|201 HSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFAS 120 130 140 150 160 170 190 200 210 220 230 240 bm0559 GIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEH :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|201 GIIMDSSISKQALSEIETRHSEIIKLETSIRELHDMFMDMAMLVESQGEMIDRIEYNVEH 180 190 200 210 220 230 250 260 270 280 bm0559 AVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA ::::::::::::::::::::::::::::::::::::::.::::.:::: gi|201 AVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIIIASTIGGIFG 240 250 260 270 280 >>gi|28502901|gb|AAH47133.1| Stx1a protein [Mus musculus (287 aa) initn: 1777 init1: 1777 opt: 1777 Z-score: 1812.3 bits: 343.3 E(): 2.6e-92 Smith-Waterman score: 1777; 98.601% identity (100.000% similar) in 286 aa overlap (3-288:1-286) 10 20 30 40 50 60 bm0559 SMKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHS :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|285 KDRTQELRTAKDSDDDDDVTVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHS 10 20 30 40 50 70 80 90 100 110 120 bm0559 AILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 AILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQ 60 70 80 90 100 110 130 140 150 160 170 180 bm0559 HSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 HSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFAS 120 130 140 150 160 170 190 200 210 220 230 240 bm0559 GIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEH :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|285 GIIMDSSISKQALSEIETRHSEIIKLETSIRELHDMFMDMAMLVESQGEMIDRIEYNVEH 180 190 200 210 220 230 250 260 270 280 bm0559 AVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA ::::::::::::::::::::::::::::::::::::::.::::.:::: gi|285 AVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIIIASTIGGIFG 240 250 260 270 280 >>gi|417841|sp|P32850|STX1A_BOVIN Syntaxin-1A (Synaptota (288 aa) initn: 1777 init1: 1777 opt: 1777 Z-score: 1812.3 bits: 343.3 E(): 2.6e-92 Smith-Waterman score: 1777; 97.909% identity (99.652% similar) in 287 aa overlap (2-288:1-287) 10 20 30 40 50 60 bm0559 SMKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHS ::::::::::::::::::::.::::::::::::::::::::::::::.::::::::::: gi|417 MKDRTQELRTAKDSDDDDDVTVTVDRDRFMDEFFEQVEEIRGFIDKISENVEEVKRKHS 10 20 30 40 50 70 80 90 100 110 120 bm0559 AILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|417 AILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQ 60 70 80 90 100 110 130 140 150 160 170 180 bm0559 HSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|417 HSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFAS 120 130 140 150 160 170 190 200 210 220 230 240 bm0559 GIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|417 GIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEH 180 190 200 210 220 230 250 260 270 280 bm0559 AVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA .::::::::::::::::::::::::::::.::::.:::::::: :::: gi|417 SVDYVERAVSDTKKAVKYQSKARRKKIMIVICCVVLGIVIASTFGGIFG 240 250 260 270 280 >>gi|6665797|gb|AAF23017.1|AF217191_1 syntaxin 1A [Rattu (288 aa) initn: 1776 init1: 1776 opt: 1776 Z-score: 1811.3 bits: 343.1 E(): 3e-92 Smith-Waterman score: 1776; 97.909% identity (99.303% similar) in 287 aa overlap (2-288:1-287) 10 20 30 40 50 60 bm0559 SMKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHS ::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|666 MKDRTQELRTAKDSDDDDDVTVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHS 10 20 30 40 50 70 80 90 100 110 120 bm0559 AILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|666 AILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQ 60 70 80 90 100 110 130 140 150 160 170 180 bm0559 HSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|666 HSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFAS 120 130 140 150 160 170 190 200 210 220 230 240 bm0559 GIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEH :::::::::::::::::::::::::::: .:::::::::::::::::::::::::::::: gi|666 GIIMDSSISKQALSEIETRHSEIIKLENRLRELHDMFMDMAMLVESQGEMIDRIEYNVEH 180 190 200 210 220 230 250 260 270 280 bm0559 AVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA ::::::::::::::::::::::::::::::::::::::.:: :.:::: gi|666 AVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIIIACTIGGIFG 240 250 260 270 280 >>gi|207127|gb|AAA42195.1| syntaxin A gi|220902|dbj| (285 aa) initn: 1770 init1: 1770 opt: 1770 Z-score: 1805.3 bits: 341.9 E(): 6.5e-92 Smith-Waterman score: 1770; 98.944% identity (100.000% similar) in 284 aa overlap (5-288:1-284) 10 20 30 40 50 60 bm0559 SMKDRTQELRTAKDSDDDDDVAVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHS :::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|207 RTQELRTAKDSDDDDDVTVTVDRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHS 10 20 30 40 50 70 80 90 100 110 120 bm0559 AILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|207 AILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQ 60 70 80 90 100 110 130 140 150 160 170 180 bm0559 HSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|207 HSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFAS 120 130 140 150 160 170 190 200 210 220 230 240 bm0559 GIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|207 GIIMDSSISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEH 180 190 200 210 220 230 250 260 270 280 bm0559 AVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIVIASTVGGIFA ::::::::::::::::::::::::::::::::::::::.::::.:::: gi|207 AVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIIIASTIGGIFG 240 250 260 270 280 289 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Fri Aug 8 00:49:29 2008 done: Fri Aug 8 00:52:07 2008 Total Scan time: 720.270 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]