hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-00520874/chunk_1/iprscan-20080808-00520874.nocrc
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Query sequence: bm05593
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00503                                                 155.3    6.3e-42   1
SM00397                                                  95.8      5e-24   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00503    1/1      26   147 ..     1   127 []   155.3  6.3e-42
SM00397    1/1     188   255 ..     1    68 []    95.8    5e-24

Alignments of top-scoring domains:
SM00503: domain 1 of 1, from 26 to 147: score 155.3, E = 6.3e-42
                   *->ardsnldeFfeeveeIraeIqkieqnveelqklheelltspdaeadk
                      +rd ++deFfe+veeIr+ I+ki +nvee+++ h+++l+sp+  +d+
     bm05593    26    DRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSAILASPN--PDE 70   

                   elrekLerdikdikrlakeikskLkalekaneenrasngCGpgSsvdrtR
                   +++e+Le+++ dik+ a++++skLk++e+++e+ + +n   ++S++ r+R
     bm05593    71 KTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLN---RSSADLRIR 117  

                   kaqtekLrkkFkevmneFqrlQrkyreryk<-*
                   k+q++ L++kF+evm+e++ +Q++yrer+k   
     bm05593   118 KTQHSTLSRKFVEVMSEYNATQSDYRERCK    147  

SM00397: domain 1 of 1, from 188 to 255: score 95.8, E = 5e-24
                   *->llqqndameqerdeeleqlersiqelkqifldlgteveeQgeqldrI
                      + +q++++++ r+ e+ +le+si+el+++f+d++++ve+Qge++drI
     bm05593   188    ISKQALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRI 234  

                   ednvdntdvnlkkankqLkka<-*
                   e+nv+++++++++a++  kka   
     bm05593   235 EYNVEHAVDYVERAVSDTKKA    255  

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