hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-01160809/chunk_1/iprscan-20090618-01160809.nocrc
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Query sequence: bm05658
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00054                                                 184.4    1.1e-50   4

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00054    1/4      24    52 ..     1    29 []    45.2  8.5e-09
SM00054    2/4      60    88 ..     1    29 []    45.5  7.2e-09
SM00054    3/4      97   125 ..     1    29 []    46.0    5e-09
SM00054    4/4     133   161 .]     1    29 []    47.7  1.5e-09

Alignments of top-scoring domains:
SM00054: domain 1 of 4, from 24 to 52: score 45.2, E = 8.5e-09
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                      e+keaF++fDkDgdG+I+ +E+ ++++sl   
     bm05658    24    EFKEAFSLFDKDGDGTITTKELGTVMRSL    52   

SM00054: domain 2 of 4, from 60 to 88: score 45.5, E = 7.2e-09
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                      el+++++e+D+Dg+G+Idf Ef+++++++   
     bm05658    60    ELQDMINEVDADGNGTIDFPEFLTMMARK    88   

SM00054: domain 3 of 4, from 97 to 125: score 46.0, E = 5e-09
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                      e++eaFr+fDkDg+G+I+  E+++++++l   
     bm05658    97    EIREAFRVFDKDGNGYISAAELRHVMTNL    125  

SM00054: domain 4 of 4, from 133 to 161: score 47.7, E = 1.5e-09
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                      e++e++re+D DgdG++++eEf+++++++   
     bm05658   133    EVDEMIREADIDGDGQVNYEEFVQMMTAK    161  

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