hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-01171875/chunk_1/iprscan-20080808-01171875.nocrc
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Query sequence: bm05674
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF01585.13.fs G-patch domain                                  48.6    2.8e-13   1
PF01585.13.ls G-patch domain                                  50.6    4.7e-12   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF01585.13.fs   1/1     324   372 ..     1    45 []    48.6  2.8e-13
PF01585.13.ls   1/1     324   372 ..     1    45 []    50.6  4.7e-12

Alignments of top-scoring domains:
PF01585.13.fs: domain 1 of 1, from 324 to 372: score 48.6, E = 2.8e-13
                   *->tsniGfklLqKMGWkeGqGLGkneqGikePieakikpdr....kGLG
                      ++n+G+++L KMGW+   GLG++eqGi +Pi+    +d+ ++ kG+G
     bm05674   324    EENKGHQMLVKMGWSGSGGLGAKEQGIQDPIKGGDVRDKwdqyKGVG 370  

                   ae<-*
                        
     bm05674   371 VA    372  

PF01585.13.ls: domain 1 of 1, from 324 to 372: score 50.6, E = 4.7e-12
                   *->tsniGfklLqKMGWkeGqGLGkneqGikePieakikpdr....kGLG
                      ++n+G+++L KMGW+   GLG++eqGi +Pi+    +d+ ++ kG+G
     bm05674   324    EENKGHQMLVKMGWSGSGGLGAKEQGIQDPIKGGDVRDKwdqyKGVG 370  

                   ae<-*
                        
     bm05674   371 VA    372  

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