hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-01171875/chunk_1/iprscan-20080808-01171875.nocrc
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Query sequence: bm05674
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00443                                                  54.3    1.6e-11   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00443     1/1     322   372 ..     1    48 []    54.3  1.6e-11

Alignments of top-scoring domains:
SM00443: domain 1 of 1, from 322 to 372: score 54.3, E = 1.6e-11
                   *->istsniGaklLekMGWkeGkGLGkneqGivePIeakikk...kdrkG
                      ++++n+G+++L kMGW+   GLG +eqGi +PI+ + ++++ ++ kG
     bm05674   322    LGEENKGHQMLVKMGWSGSGGLGAKEQGIQDPIKGGDVRdkwDQYKG 368  

                   LGav<-*
                   +G++   
     bm05674   369 VGVA    372  

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