hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/TIGRFAMs_HMM.LIB.bin Sequence file: /db/iprscan/tmp/20090416/iprscan-20090416-12104049/chunk_1/iprscan-20090416-12104049.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: bm05720 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio- 272.2 3.3e-79 1 TIGR01549 HAD-SF-IA-v1: HAD-superfamily hydrolase 3.6 0.00022 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TIGR01691 1/1 65 310 .. 1 240 [] 272.2 3.3e-79 TIGR01549 1/1 145 279 .. 1 151 [] 3.6 0.00022 Alignments of top-scoring domains: TIGR01691: domain 1 of 1, from 65 to 310: score 272.2, E = 3.3e-79 *->ikvvLlDIEGTTssISFVhDVLFPYAakrleafvrdsyeeddvKtiv + v+LlDIEGTT++I FV+D LFPY +++ +++ ++ee++ v bm05720 65 VTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDV 111 enLr...evvkepeeGAkelLkklqaemdkDrkAGFvRYLiDq....... Lr++ e+ + ++ ++ + D+ + ++D + + bm05720 112 SLLRkqaEEDAHLDG--AVPIPAASGNGVDDLQ-QMIQAVVDNvcwqmsl 158 DLKatplKtLQGlIWrqGYedGeLtahLYPDVpPAleaWkkaGlrlyVYS D K t+lK LQG Wr + G ++a + DV+PA +W+ aG+ +y+YS bm05720 159 DRKTTALKQLQGHMWRAAFTAGRMKAEFFADVVPAVRKWREAGMKVYIYS 208 SGSVaAQKLlFGHSdaGdLtplFsgYFDTlvGaKkEaqSYkkIaeqlgep SGSV AQKLlFGHS +Gd++ l g FDT +G+K E SY+kIa +g bm05720 209 SGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCS 258 PkeILFLSDiiaELdAArkaGLrtlqLVRpgndavaDpaGksvypqvpdl ILFL+D+ E+ AA++a ++ +VRpgn+ + D+ k+ y ++ + bm05720 259 TNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDE-KTYYSLITSF 307 ddv<-* + bm05720 308 SEL 310 TIGR01549: domain 1 of 1, from 145 to 279: score 3.6, E = 0.00022 *->ailFDidGTLvdseairealeqtfeefgasfkrlkalrlaeellwri + +++ ++++ + +++ ++lk+l ++wr bm05720 145 ----------IQAVVDNVCWQMSLDRKT---TALKQLQ---GHMWRA 175 atsleelqgleaeeayirdavdllkrl..agyrlgiiSngslraqklllr a+ ++++ +++d+v+ ++++++ag++++i+S+gs++aqkll++ bm05720 176 AFTAGRMKA-----EFFADVVPAVRKWreAGMKVYIYSSGSVEAQKLLFG 220 llydyfelilvsdep....gvsKPnpeiflaaleslglg.pevlhvGDnl ++ + + l lv+++++++ g +K ++e+++++++s+g+++ ++l++ D bm05720 221 HSTEGDILELVDGHFdtkiG-HKVESESYRKIADSIGCStNNILFLTDV- 268 lnDiegArnaG<-* + ++ +A++a bm05720 269 TREASAAEEAD 279 //